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ab65348 NAD/NADH Assay Kit - Abcam

ab65348 NAD/NADH Assay Kit - Abcam

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<strong>ab65348</strong><br />

<strong>NAD</strong>/<strong>NAD</strong>H <strong>Assay</strong> <strong>Kit</strong><br />

Instructions for Use<br />

For the rapid, sensitive and accurate<br />

measurement of <strong>NAD</strong>/<strong>NAD</strong>H in various samples.<br />

This product is for research use only and is not<br />

intended for diagnostic use.


Table of Contents<br />

1. Overview 3<br />

2. Protocol Summary 4<br />

3. Components and Storage 5<br />

4. <strong>Assay</strong> Protocol 7<br />

5. Data Analysis 10<br />

6. Troubleshooting 11<br />

2


1. Overview<br />

<strong>Assay</strong> of nicotinamide nucleotides is of continual interest in the<br />

studies of energy transforming and redox state of cells or tissues.<br />

<strong>Abcam</strong>’s <strong>NAD</strong>H/<strong>NAD</strong> Quantification <strong>Kit</strong> provides a convenient tool for<br />

sensitive detection of the intracellular nucleotides: <strong>NAD</strong>H, <strong>NAD</strong> and<br />

their ratio. The <strong>NAD</strong> Cycling Enzyme Mix in the kit specifically<br />

recognizes <strong>NAD</strong>H/<strong>NAD</strong> in an enzyme cycling reaction. There is no<br />

requirement to purify <strong>NAD</strong>H/<strong>NAD</strong> from samples.<br />

The reaction specifically detects <strong>NAD</strong>H and <strong>NAD</strong>, but not <strong>NAD</strong>P nor<br />

<strong>NAD</strong>PH. The enzyme cycling reaction significantly increases the<br />

detection sensitivity and specificity. <strong>NAD</strong>t (<strong>NAD</strong> and <strong>NAD</strong>H) or<br />

<strong>NAD</strong>H can be easily quantified by comparing with standard <strong>NAD</strong>H.<br />

3


2. Protocol Summary<br />

Sample Preparation<br />

Standard Curve Preparation<br />

Prepare and Add Reaction Mix<br />

Measure Optical Density<br />

4


3. Components and Storage<br />

A. <strong>Kit</strong> Components<br />

Item<br />

Quantity<br />

<strong>NAD</strong>H/<strong>NAD</strong> Extraction Buffer<br />

50 mL<br />

<strong>NAD</strong> Cycling Buffer<br />

15 mL<br />

<strong>NAD</strong> Cycling Enzyme Mix<br />

1 vial<br />

<strong>NAD</strong>H Developer<br />

1 vial<br />

Stop Solution<br />

1.2mL<br />

<strong>NAD</strong>H Standard (MW:763) 152.6 µg<br />

Store kit at -20°C.<br />

The enzymes are stable for up to 2 months at -80°C after<br />

reconstitution.<br />

Ensure that the <strong>NAD</strong> Cycling Buffer is at room temperature before<br />

use. Keep other enzymes on ice during the assay and protect from<br />

light.<br />

5


B. Additional Materials Required<br />

• Microcentrifuge<br />

• Pipettes and pipette tips<br />

• Colorimetric microplate reader<br />

• 96 well plate<br />

• Orbital shaker<br />

6


4. <strong>Assay</strong> Protocol<br />

1. Sample Preparation:<br />

a) For cell samples: Wash cells with cold PBS. Pellet 2 X 10 5 cells<br />

for each assay in a micro-centrifuge tube (2000 rpm for 5 min).<br />

Extract the cells with 400 µl of <strong>NAD</strong>H/<strong>NAD</strong> Extraction Buffer by<br />

freeze/thaw two cycles (20 min on dry-ice, then 10 min at room<br />

temperature), or homogenization. Vortex the extraction for<br />

10 sec. Spin the sample at 14000 rpm for 5 min. Transfer the<br />

extracted <strong>NAD</strong>H/<strong>NAD</strong> supernatant into a labeled tube.<br />

b) For tissue samples (weight ~20 mg): Wash with cold PBS,<br />

homogenize with 400 µl of <strong>NAD</strong>H/<strong>NAD</strong> Extraction Buffer in a<br />

micro-centrifuge tube. Spin the sample at 14000 rpm for 5 min.<br />

Transfer the extracted <strong>NAD</strong>H/<strong>NAD</strong> supernatant into a new tube.<br />

Note:<br />

Cell or tissue lysates may contain enzymes that consume <strong>NAD</strong>H<br />

rapidly. We suggest removal of these enzymes by filtering the<br />

samples through 10 kDa molecular weight cut off filters (ab93349)<br />

before performing the assay.<br />

2. Standard Curve Preparation:<br />

Reconstitute <strong>NAD</strong>H standard with 200 µl of pure DMSO to generate<br />

1 nmol/µl <strong>NAD</strong>H standard solution. Dilute 10 µl of the 1 nmol/µl<br />

<strong>NAD</strong>H standard with 990 µl <strong>NAD</strong>H/<strong>NAD</strong> Extraction Buffer to<br />

7


generate 10 pmol/µl standard <strong>NAD</strong>H (Note: diluted <strong>NAD</strong>H solution is<br />

unstable, must be used within 4 hours).<br />

Add 0, 2, 4, 6, 8, 10 µl of the diluted <strong>NAD</strong>H standard into labeled<br />

96-well plate in duplicate to generate 0, 20, 40, 60, 80, 100 pmol/well<br />

standard. Make the final volume to 50 µl with <strong>NAD</strong>H/<strong>NAD</strong> extraction<br />

buffer.<br />

a. To detect total <strong>NAD</strong>t (<strong>NAD</strong>H and <strong>NAD</strong>): Transfer 50 µl of<br />

extracted samples into labeled 96-well plate in duplicates.<br />

We recommend performing several different sample dilutions with<br />

the Extraction Buffer to ensure the readings fall in the standard<br />

curve range.<br />

b. To detect <strong>NAD</strong>H: <strong>NAD</strong> needs to be decomposed before the<br />

reaction. To decompose <strong>NAD</strong>, aliquot 200 µl the extracted<br />

samples into eppendorf tubes. Heat to 60°C for 30 min in a water<br />

bath or a heating block. Under these conditions, all <strong>NAD</strong> will be<br />

decomposed, while <strong>NAD</strong>H will still be intact. Cool samples on ice.<br />

Quick spin the samples to remove precipitates if precipitation<br />

occurs.<br />

Transfer 50 µl of <strong>NAD</strong> decomposed samples into labeled 96-well<br />

plate in duplicates.<br />

We recommend performing several different sample dilutions with<br />

the Extraction Buffer to ensure the readings fall in the standard<br />

curve range.<br />

8


3. <strong>NAD</strong> Cycling Mix:<br />

a) Reconstitute <strong>NAD</strong> Cycling Enzyme Mix with 220 µl <strong>NAD</strong> Cycling<br />

Buffer. Reconstitute <strong>NAD</strong>H developer with 1.2 ml of ddH 2 O.<br />

Pipette up and down several times to completely dissolve the<br />

pellet into solution (don’t vertex). Aliquot enough <strong>NAD</strong> Cycling<br />

Enzyme mix (2 µl per assay) for the number of assays to be<br />

performed in each experiment and freeze the stock solution<br />

immediately at -80°C for future use. The enzymes are stable for<br />

up to 2 months at -80°C after reconstitution.<br />

b) Prepare a <strong>NAD</strong> Cycling Mix for each reaction:<br />

<strong>NAD</strong> Cycling Buffer: 100 µl<br />

<strong>NAD</strong> Cycling Enzyme Mix: 2 µl<br />

c) Mix well and add 100 µl of the mix into each well of <strong>NAD</strong>H<br />

standard and samples.<br />

4. Mix and incubate the plate at room temperature for 5 min to<br />

convert <strong>NAD</strong> to <strong>NAD</strong>H.<br />

5. Add 10 µl <strong>NAD</strong>H developer into each well. Let the reaction cycling<br />

at room temperature for 1 to 4 hours or longer depend on the<br />

reading of OD 450nm .<br />

6. Read the plate at OD 450nm . The plate can be read multiple times<br />

while the color is in developing. The reactions can be stopped by<br />

adding 10 µl of Stop Solution into each well and mix well. The color<br />

9


should be stable within 48 hours in a sealed plate after addition of<br />

Stop Solution.<br />

5. Data Analysis<br />

Apply the sample readings to <strong>NAD</strong>H standard curve. The amount of<br />

<strong>NAD</strong>t or <strong>NAD</strong>H in the sample wells can be calculated, then divide the<br />

<strong>NAD</strong>t or <strong>NAD</strong>H amount by the sample amount (e.g. cell number or<br />

extract protein amount) you added into the sample wells. The<br />

concentration of <strong>NAD</strong>t or <strong>NAD</strong>H can be expressed in pmol/10 6 cells<br />

or ng/mg protein (<strong>NAD</strong>H molecular weight 664.4).<br />

<strong>NAD</strong>/<strong>NAD</strong>H Ratio is calculated as:<br />

<strong>NAD</strong>t – <strong>NAD</strong>H<br />

<strong>NAD</strong>H<br />

10


6. Troubleshooting<br />

Problem Reason Solution<br />

<strong>Assay</strong> not<br />

working<br />

Unexpected<br />

results<br />

<strong>Assay</strong> buffer at<br />

wrong temperature<br />

Protocol step missed<br />

Plate read at<br />

incorrect wavelength<br />

Unsuitable microtiter<br />

plate for assay<br />

Measured at wrong<br />

wavelength<br />

Samples contain<br />

impeding substances<br />

Unsuitable sample<br />

type<br />

Sample readings are<br />

outside linear range<br />

<strong>Assay</strong> buffer must not be chilled<br />

- needs to be at RT<br />

Re-read and follow the protocol<br />

exactly<br />

Ensure you are using<br />

appropriate reader and filter<br />

settings (refer to datasheet)<br />

Fluorescence: Black plates<br />

(clear bottoms);<br />

Luminescence: White plates;<br />

Colorimetry: Clear plates.<br />

If critical, datasheet will indicate<br />

whether to use flat- or U-shaped<br />

wells<br />

Use appropriate reader and filter<br />

settings described in datasheet<br />

Troubleshoot and also consider<br />

deproteinizing samples<br />

Use recommended samples<br />

types as listed on the datasheet<br />

Concentrate/ dilute samples to<br />

be in linear range<br />

11


Samples<br />

with<br />

inconsistent<br />

readings<br />

Lower/<br />

Higher<br />

readings in<br />

samples<br />

and<br />

standards<br />

Unsuitable sample<br />

type<br />

Samples prepared in<br />

the wrong buffer<br />

Samples not<br />

deproteinized (if<br />

indicated on<br />

datasheet)<br />

Cell/ tissue samples<br />

not sufficiently<br />

homogenized<br />

Too many freezethaw<br />

cycles<br />

Samples contain<br />

impeding substances<br />

Samples are too old<br />

or incorrectly stored<br />

Not fully thawed kit<br />

components<br />

Out-of-date kit or<br />

incorrectly stored<br />

reagents<br />

Reagents sitting for<br />

extended periods on<br />

ice<br />

Incorrect incubation<br />

time/ temperature<br />

Incorrect amounts<br />

used<br />

Refer to datasheet for details<br />

about incompatible samples<br />

Use the assay buffer provided<br />

(or refer to datasheet for<br />

instructions)<br />

Use the 10kDa spin column<br />

(ab93349)<br />

Increase sonication time/<br />

number of strokes with the<br />

Dounce homogenizer<br />

Aliquot samples to reduce the<br />

number of freeze-thaw cycles<br />

Troubleshoot and also consider<br />

deproteinizing samples<br />

Use freshly made samples and<br />

store at recommended<br />

temperature until use<br />

Wait for components to thaw<br />

completely and gently mix prior<br />

use<br />

Always check expiry date and<br />

store kit components as<br />

recommended on the datasheet<br />

Try to prepare a fresh reaction<br />

mix prior to each use<br />

Refer to datasheet for<br />

recommended incubation time<br />

and/ or temperature<br />

Check pipette is calibrated<br />

correctly (always use smallest<br />

volume pipette that can pipette<br />

entire volume)<br />

12


Problem Reason Solution<br />

Standard<br />

curve is not<br />

linear<br />

Not fully thawed kit<br />

components<br />

Pipetting errors when<br />

setting up the<br />

standard curve<br />

Incorrect pipetting<br />

when preparing the<br />

reaction mix<br />

Air bubbles in wells<br />

Concentration of<br />

standard stock<br />

incorrect<br />

Errors in standard<br />

curve calculations<br />

Use of other<br />

reagents than those<br />

provided with the kit<br />

Wait for components to thaw<br />

completely and gently mix prior<br />

use<br />

Try not to pipette too small<br />

volumes<br />

Always prepare a master mix<br />

Air bubbles will interfere with<br />

readings; try to avoid producing<br />

air bubbles and always remove<br />

bubbles prior to reading plates<br />

Recheck datasheet for<br />

recommended concentrations of<br />

standard stocks<br />

Refer to datasheet and re-check<br />

the calculations<br />

Use fresh components from the<br />

same kit<br />

For further technical questions please do not hesitate to<br />

contact us by email (technical@abcam.com) or phone (select<br />

“contact us” on www.abcam.com for the phone number for<br />

your region).<br />

13


UK, EU and ROW<br />

Email: technical@abcam.com<br />

Tel: +44 (0)1223 696000<br />

www.abcam.com<br />

US, Canada and Latin America<br />

Email: us.technical@abcam.com<br />

Tel: 888-77-ABCAM (22226)<br />

www.abcam.com<br />

China and Asia Pacific<br />

Email: hk.technical@abcam.com<br />

Tel: 108008523689 ( 中 國 聯 通 )<br />

www.abcam.cn<br />

Japan<br />

Email: technical@abcam.co.jp<br />

Tel: +81-(0)3-6231-0940<br />

www.abcam.co.jp<br />

15<br />

Copyright © 2012 <strong>Abcam</strong>, All Rights Reserved. The <strong>Abcam</strong> logo is a registered trademark.<br />

All information / detail is correct at time of going to print.

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