njit-etd2003-081 - New Jersey Institute of Technology

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233 Table 5.9 Principal Components of Different Population Groups PC1 PC2 PC3 Normal (Exercise) Normal + COPD1 RSP BP LF_PCOH_HR_BP RSP HF_COH_HR_BP HF_PCOH_HR_BP Normal + COPD2 LF _ COH _ HR _ RSP HF' _ COH _ BP _ RSP RSP Table 5.9 shows the summary of the principal component analysis for the three cases of the HRV study for both normal and COPD subjects. The data set for normal subjects during exercise shows the respiration rate was first principal component (PC); the blood pressure was the second PC and the partial coherence value between heart rate and blood pressure in the low frequency range was the third PC. When the first set of data that combined the COPD and normal data was used, only the first PC of respiration was the same and the other two PC's were different. When the second set of the combined COPD-normal data was used, the three PC's were completely different. This fact indicates that the PCA method is not "event" dependent but the technique is only adaptive to the actual data used.
234 5.7 Cluster Analysis The purpose of using principal component analysis (PCA) and cluster analysis (CA) is illustrated by the results of figures 5.63 and 5.64 and summarized in Table 5.10. First, PCA-CA was used to blindly separate the normal subjects and COPD patients using a data set that contained the physiological data such as heart rate, blood pressure rate and respiration rate as well as the cross-spectral results of the (weighted) coherence and partial coherence in both the LF and HF range. Figure 5.63 clearly shows the separation between the COPD group (green squares and blue pluses) from the normal group (red circles). In the same figure, one red circle of a normal subject was placed near a blue plus and a green square of the COPD subject. The reason for this may be that the COPD subjects represented by blue plus and green square may only be at risk of the disease. Hence, their physiological parameters placed them near that of the normal subject. The COPD group is represented in green and blue markers because their data came from the same COPD group, but were from two different testing trials. This proves that cluster analysis could separate the normal and COPD subjects and the results were reproducible, i.e. same results for the same COPD group even with different data sets from different experimental trials. Figure 5.64 shows the results of not only normal and COPD blind separation but also the COPD severity classification. When the desired number of clusters was set prior to running the cluster analysis program to separate the normal group (cluster 1) from the "at risk" group (cluster 2), the "mild' group (cluster 3), the "moderate" group (cluster 4) and the "severe' group (cluster 5), the result was the graph of figure 5.64. This is the first attempt at this type of blind separation and classification. Another more fine-tuned
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Copyright Warning & Restrictions Th
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ABSTRACT TIME-FREQUENCY INVESTIGATI
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TIME-FREQUENCY INVESTIGATION OF HEA
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APPROVAL PAGE TIME-FREQUENCY INVEST
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BIOGRAPHICAL SKETCH (Continued) D.A
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ACKNOWLEDGMENT The author wishes to
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TABLE OF CONTENTS Chapter Page 1 IN
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TABLE OF CONTENTS (Continued) Chapt
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LIST OF FIGURES Figure Page 2.1 The
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LIST OF FIGURES (Continued) Figure
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LIST OF FIGURES (Continued) Figure
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ABBREVIATIONS A ABP Arterial Blood
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ABBREVIATIONS (Continued) P PID Pro
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2 mortality and sudden death. [2] B
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4 1) Patients with severe pulmonary
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6 examined for determining the inte
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8 identified using principal compon
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1 0 1. Present the application of t
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12 1.3 Outline of the Dissertation
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CHAPTER 2 PHYSIOLOGY BACKGROUND Bio
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16 Figure 2.2 The systemic and pulm
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18 illustrated in Figure 2.3. The i
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20 2.2 Blood Pressure The force tha
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22 2.4 The Nervous System Human beh
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24 The sympathetic nerve fibers lea
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26 Without these sympathetic and pa
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28 center in the medulla, which con
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30 Figure 2.6 Autonomic innervation
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32 average heart rate was measured
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34 However, they do note that there
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Figure 2.9 The placement of the pos
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38 female. While more men suffer fr
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40 Stage II: Moderate COPD - Worsen
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CHAPTER 3 ENGINEERING BACKGROUND Th
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44 Two common types of time-frequen
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46 STFT: Short-Time Fourier Transfo
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48 3.3 The Analytic Signal and Inst
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50 The advantage of using equation
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52 3.5 Covariance and Invariance Th
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where H(f), S(f) are Fourier transf
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56 Another shortcoming of the spect
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58 should take the kernel of the WD
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60 called the cross Wigner distribu
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62 3.6.3 The Choi-Williams (Exponen
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64 Figure 3.3 Performance of the Ch
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66 [-Ω,Ω ], then its STFT will be
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68 This condition forces that the w
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70 where c is a constant. Thus, the
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Figure 3.5 The time-frequency plane
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74 The measure dadb used in the tra
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76 and the wavelet transform repres
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78 Figure 3.6 Figure depicting the
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80 The final step to obtain the pow
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82 It should be noted that if the w
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84 The normal respiration rate can
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Figure 3.12 Power spectrum of BP II
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RR similar manner to give: When com
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90 when there is significant correl
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92 3.12 Partial Coherence Analysis
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94 after removal of the effects of
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96 The bulk of the theory and appli
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98 technique is measurement time. T
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100 usually attainable. The key poi
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102 variability exists in the propa
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104 eXogenous input (ARX) was used
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106 The baroreflex, an autonomic re
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108 the principal components are no
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110 The mathematical solution for t
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112 3.15 Cluster Analysis The term
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114 formed) one can read off the cr
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116 3.15.5 Squared Euclidian Distan
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118 Alternatively, one may use the
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120 Sneath and Sokal used the abbre
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122 may seem a bit confusing at fir
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CHAPTER 4 METHODS The purpose of th
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126 4.1.2.1 Autonomic Testing. HR V
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128 of heart rate, blood pressure,
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130 The patients who underwent LVRS
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132 panel of the Correct.vi. It was
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134 4.2.3 Power Spectrum Analysis o
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136 weighted-average value of the c
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138 For each given scale a within t
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140 frequency F to the wavelet func
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142 4.2.8 System Identification Ana
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144 In this study a simpler approac
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146 Table 4.2 Parameters That Make
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148 4.2.11 Cluster Analysis The sam
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150 viewing the time series of sequ
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Figure 5.2 BPV analysis of a COPD s
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Figure 5.3 HRV analysis of a normal
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Figure 5.4.1 Comparison of the HRV
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158 5.2 Time Frequency Analysis One
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Figure 5.5 Test signal with 3 sine
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162 Figure 5.6 (c) CWD of a signal
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164 Figure 5.7 (c) WT (dB4 wavelet)
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166 HRV more information about HRV
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168 Figure 5.9 (c) CWD plots of a n
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Figure 5.10 CWT (Morlet) HRV plot o
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172 The following figures show the
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174 Figure 5.15 CWT (Mexican Hat) H
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176 5.2.5 Best Wavelet Selection fo
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178 Table 5.1 Correlation Indices o
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180 5.2.6 Vagal Tone and Sympathova
Page 211 and 212: 182 These figures basically show th
Page 213 and 214: 184 Figure 5.20 Sympathetic and par
Page 217 and 218: 188 5.2.7 Time-Frequency Analysis (
Page 219 and 220: 190 Figure 5.29 3D and contour plot
Page 221 and 222: 192 Figure 5.33 3D and contour plot
Page 229 and 230: Figure 5.44 Plot of raw respiration
Page 231 and 232: Figure 5.46 The LF partial coherenc
Page 233 and 234: Figure 5.48 HF partial coherence pl
Page 235 and 236: Table 5.2 Cross-Spectral Analysis o
Page 237 and 238: Table 5.3 Cross-Spectral Analysis o
Page 239 and 240: Figure 5.50 HF coherence of COPD (1
Page 241 and 242: 212 For better presentation of the
Page 243 and 244: Figure 5.53 Coherence and partial c
Page 245 and 246: 216 2. Interpretation of the transf
Page 247 and 248: 218 covariances of the parameters,
Page 249 and 250: 220 deviations are interpreted as A
Page 251 and 252: 222 Figure 5.58 Bode plot of the HR
Page 253 and 254: 224 In this section a simple model
Page 255 and 256: 226 The data for all 47 COPD subjec
Page 257 and 258: 228 Figure 5.60 Normal and COPD cla
Page 259 and 260: 230 Figure 5.61 Normal and COPD cla
Page 261: 232 Figure 5.62 Normal classificati
Page 265 and 266: 236 Figure 5.64 Severity classifica
Page 267 and 268: 238 both the normal and COPD subjec
Page 269 and 270: 240 In summary, COPD subjects had h
Page 271 and 272: APPENDIX A EXERCISE PHYSIOLOGY A.1
Page 273 and 274: 244 A.3 Figure Out Your Target Hear
Page 275 and 276: APPENDIX B ANALYSIS PROGRAM LISTING
Page 277 and 278: 248 4) Click on file, close to exit
Page 279 and 280: 250 • TN 11
Page 281 and 282: 252 B.1.2 Partial Coherence Between
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Page 285 and 286: 256 Block Diagram !rime of record K
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Page 289 and 290: 260 B.2.2 Time — Frequency Analys
Page 291 and 292: 262 This program provides the STFT
Page 293 and 294: 264 G(:j+1)=G(:,j+1)/(2*sum(G(:j+1)
Page 295 and 296: 266 T=(length(Signa)/sample)/(Times
Page 297 and 298: 268 subplot(3, 1,3), plot(T,E); xla
Page 299 and 300: 270 4. The program creates five out
Page 301 and 302: 272 B.2.3.4 Program to Generate Sym
Page 303 and 304: 274 ylabel('frequency'); title('Ins
Page 305 and 306: 276 The program will run and output
Page 307 and 308: 278 axis([0 1 0 2]); grid on; xlabe
Page 309 and 310: 280 vagal=sum(TFDs(HFC,1:k)); symto
Page 311 and 312: 282 plot(J,symtopar); %plot(A,symto
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284 4. Remove the constant levels a
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286 Make sure the agreement is quit
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288 B.2.6 Principal Components Anal
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290 Columns 12 through 15 'LF_pcoh_
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292 I= 1.0000 -0.0000 -0.0000 -0.00
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294 variances = 3.4083 1.2140 1.141
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296 B.2.7 Cluster Analysis Program
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298 end [R,C]=size(Data); if length
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300 B.2.8 Cross-correlation Program
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302 C.3 Partial coherence of HR and
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304 [13] Madwed, J., and R. Cohen.
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306 [41] Mallat, S. G., "A Theory f
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[70] Tazebay, M.V., R.T. Saliba and
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