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292 Tchaga<br />

5. Use the BCA Protein Assay (Pierce; Cat. no. 23235) for protein quantitation.<br />

6. Start preparing the columns while centrifuging the samples.<br />

7. If extract or lysate is not translucent, you can clarify the sample by passing it<br />

through a 0.45-μm filter or filter paper.<br />

8. Use the BCA Protein Assay (Pierce; Cat. no. 23235) for protein quantitation.<br />

9. We recommend a maximum sample load of 8 mg of total protein over a single<br />

column. If loading higher amounts, additional washing steps should be performed.<br />

Up to 5 ml of extract can be added to the column at a time. If your sample<br />

volume is larger than 5 ml, then add the extract in steps.<br />

10. This type of purification is referred to as mixed batch/gravity flow chromatography<br />

in which the adsorption of the target proteins is carried under batch mixing<br />

of the sample with the resin, followed by gravity-based adsorption, washing, and<br />

elution.<br />

11. Optional: If a cold room environment is not available perform this and the<br />

following steps at room temperature, otherwise continue at 4ºC.<br />

Acknowledgments<br />

I thank Dr. Andrew Farmer for helping with the linguistic review of this<br />

article.<br />

References<br />

1. Karr, D.B. and Emerich, D.W. (1989) Protein phosphorylation in Bradyrhizobium<br />

japonicum bacteroids and cultures. J. Bacteriol. 171(6), 3420–3426.<br />

2. Bourret, R.B., Hess J.F., Borkovich, K.A., Pakula, A.A., and Simon, M.I. (1989)<br />

Protein phosphorylation in chemotaxis and two-component regulatory systems of<br />

bacteria. J. Biol. Chem. 264(13), 7085–7088.<br />

3. Kennelly, P.J. and Potts, M. (1996) Fancy meeting you here! A fresh look at<br />

“prokaryotic” protein phosphorylation. J. Bacteriol. 178(16), 4759–4764.<br />

4. Klumpp, S. and Krieglstein, J. (2002) Phosphorylation and dephosphorylation of<br />

histidine residues in proteins. Eur. J. Biochem. 269(4), 1067–1071.<br />

5. Eichler, J. and Adams, M.W.W. (2005) Posttranslational protein modification in<br />

archaea. Microbiol. Mol. Biol. Rev. 69(3), 393–425.<br />

6. Ficarro, S.B., et al. (2003) Phosphoproteome analysis of capacitated human sperm.<br />

Evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosincontaining<br />

protein/p97 during capacitation. J. Biol. Chem. 278(13), 11579–11589.<br />

7. Ficarro, S.B., et al. (2002) Phosphoproteome analysis by mass spectrometry and<br />

its application to Saccharomyces cerevisiae. Nat. Biotechnol. 20(3), 301–305.<br />

8. Matthews, H.R. (1995) Protein kinases and phosphatases that act on histidine,<br />

lysine, or arginine residues in eukaryotic proteins: a possible regulator of the<br />

mitogen-activated protein kinase cascade. Pharmacol. Ther. 67(3), 323–350.<br />

9. Porath, J., Carlsson, J., Olsson, I., and Belfrage, G. (1975) Metal chelate affinity<br />

chromatography, a new approach to protein fractionation. Nature 258, 598–599.

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