View - ResearchGate
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196 Urh et al. 2.3. Detection of Protein–Protein Interactions by Isolation of Pre-Formed Bait–Prey Complexes Follow the steps as in Subheading 2.2. 2.4. Detection of Protein–Protein Interactions In Vivo 1. HaloLink Resin (cat. no. G1911 or G1912, Promega). 2. Binding buffer: Same as Subheading 2.1., step 3, except the concentration of IGEPAL-CA630 is reduced to 0.001%. 3. Wash buffer: Same as Subheading 2.1., step 4, except the concentration of BSA is reduced to 0.5%. 4. Elution buffer: Same as Subheading 2.2., step 5. 2.5. Detection of Protein–DNA Interactions 1. HaloLink resin (cat. no. G1911 or G1912, Promega). 2. HaloLink Equilibration Buffer: 1× Tris-EDTA buffer (TE) pH 7 (10 mM Tris– HCl pH 7.0, 1 mM EDTA) 0.05% IGEPAL or 0.5% Triton X-100. 3. Tris buffered saline (TBS) buffer, 1×: 100 mM Tris–HCl pH 7.6, 150 mM NaCl. 4. Phosphate-buffered saline (PBS) buffer, Dulbecco’s PBS, 1× (cat. no. 14190, Invitrogen). 5. Lysis buffer: 50 mM Tris–HCl pH 7.5, 150 mM NaCl, 5 mM EDTA, 1% Triton X-100, 0.1% sodium deoxycholate (NaDOC). 6. High salt lysis buffer: 50 mM Tris–HCl pH 7.5, 700 mM NaCl, 5 mM EDTA, 1%, Triton X-100, 0.1% NaDOC. 7. Reversal buffer: 1× TE pH 7, 300 mM NaCl. 2.6. Enzyme Immobilization and Analysis of Enzymatic Activity on the Surface 1. HaloLink Resin (cat. no. G1911 or G1912, Promega). 2. Binding buffer: Same as Subheading 2.1., step 3. 3. Wash buffer: Same as Subheading 2.1., step 4. 2.7. One-Step Purification of Fusion Proteins 1. HaloLink Resin (cat. no. G1911 or G1912, Promega). 2. Binding buffer: Same as Subheading 2.1., step 3. 3. Wash buffer: Same as Subheading 2.1., step 4. 2.8. Cloning Vectors The HaloTag-containing Flexi® Vectors are available for the cloning of desired proteins. The protein of interest can be fused to HaloTag using Flexi®
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196 Urh et al.<br />
2.3. Detection of Protein–Protein Interactions by Isolation<br />
of Pre-Formed Bait–Prey Complexes<br />
Follow the steps as in Subheading 2.2.<br />
2.4. Detection of Protein–Protein Interactions In Vivo<br />
1. HaloLink Resin (cat. no. G1911 or G1912, Promega).<br />
2. Binding buffer: Same as Subheading 2.1., step 3, except the concentration of<br />
IGEPAL-CA630 is reduced to 0.001%.<br />
3. Wash buffer: Same as Subheading 2.1., step 4, except the concentration of BSA<br />
is reduced to 0.5%.<br />
4. Elution buffer: Same as Subheading 2.2., step 5.<br />
2.5. Detection of Protein–DNA Interactions<br />
1. HaloLink resin (cat. no. G1911 or G1912, Promega).<br />
2. HaloLink Equilibration Buffer: 1× Tris-EDTA buffer (TE) pH 7 (10 mM Tris–<br />
HCl pH 7.0, 1 mM EDTA) 0.05% IGEPAL or 0.5% Triton X-100.<br />
3. Tris buffered saline (TBS) buffer, 1×: 100 mM Tris–HCl pH 7.6, 150 mM NaCl.<br />
4. Phosphate-buffered saline (PBS) buffer, Dulbecco’s PBS, 1× (cat. no. 14190,<br />
Invitrogen).<br />
5. Lysis buffer: 50 mM Tris–HCl pH 7.5, 150 mM NaCl, 5 mM EDTA, 1% Triton<br />
X-100, 0.1% sodium deoxycholate (NaDOC).<br />
6. High salt lysis buffer: 50 mM Tris–HCl pH 7.5, 700 mM NaCl, 5 mM EDTA,<br />
1%, Triton X-100, 0.1% NaDOC.<br />
7. Reversal buffer: 1× TE pH 7, 300 mM NaCl.<br />
2.6. Enzyme Immobilization and Analysis of Enzymatic Activity<br />
on the Surface<br />
1. HaloLink Resin (cat. no. G1911 or G1912, Promega).<br />
2. Binding buffer: Same as Subheading 2.1., step 3.<br />
3. Wash buffer: Same as Subheading 2.1., step 4.<br />
2.7. One-Step Purification of Fusion Proteins<br />
1. HaloLink Resin (cat. no. G1911 or G1912, Promega).<br />
2. Binding buffer: Same as Subheading 2.1., step 3.<br />
3. Wash buffer: Same as Subheading 2.1., step 4.<br />
2.8. Cloning Vectors<br />
The HaloTag-containing Flexi® Vectors are available for the cloning of<br />
desired proteins. The protein of interest can be fused to HaloTag using Flexi®