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Phage Display of Peptides in Ligand Selection 121<br />

gel electrophoresis could be used to analyze each fraction and the wash<br />

fractions; however, there will be no distinction between total serum antibodies<br />

and antibodies that bind to the peptide and have been eluted from the column.<br />

Therefore, we recommend performing an ELISA using the native antigen as<br />

the purified antibodies should bind to the same antigen epitope that the peptide<br />

mimics. An example of this is shown in Fig. 3A. The methods described in<br />

Subheading 3.2 can be used with the following modifications.<br />

Step 1: Coat wells of a microtiter plate with 2–10 μg/ml antigen.<br />

Step 3: The original, wash and eluted fractions should be diluted 1:10–1:50<br />

in PBST.<br />

Step 5: Anti-human IgG conjugated to HRP should be used at the manufacturers<br />

suggested concentration (usually 1/5000 dilution for Chemicon AP113P).<br />

The ELISA results should indicate which eluted fractions should be retained;<br />

these should be pooled and dialyzed into PBS and concentrated using an<br />

A<br />

0.5<br />

Absorbance 450nm<br />

B<br />

Absorbance 450nm<br />

0.4<br />

0.3<br />

0.2<br />

0.1<br />

2<br />

1.8<br />

1.6<br />

1.4<br />

1.2<br />

1<br />

0.8<br />

0.6<br />

0.4<br />

0.2<br />

0<br />

prepurificati<br />

on<br />

Flow PBS wash1 Bo rate<br />

wash<br />

PBS wash2 Elution1 Elution2 Elution3 Elution4 Elution5 Elution6<br />

0<br />

1000 10000 100000 1000000<br />

Dilution<br />

Fig. 3. (Continued)<br />

Original antigen<br />

Antigen 1<br />

Antigen 2

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