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Immunoaffinity Chromatography 59 absorbance must be used during coupling with NHS-activated supports. Vendors who offer activated supports include GE (http://www.amershambioscienes.com), Millipore (http://www.millipore.com), BioRad (http://www.biorad.com), JT Baker (http://www.jtbaker.com), and Tosoh Bioscience (http://www.tosohbiosep.com). 3. NHS-activated Sepharose HP is only available in prepacked HiTrap columns; however, NHS-activated Sepharose 4 Fast Flow is available as unpacked gel in a range of resin volumes. The unpacked gel has the advantage of allowing packing of a broad range of column sizes. 4. As NHS interferes with absorbance measurements near 280 nm, A 280 nm will not be effective for determination of coupling efficiency. 5. A flow rate of between 1 and 5 ml/min (30–150 cm/h) may be applicable for a 2.5 cm (long) by 1.6 cm (in diameter) column of NHS-activated Sepharose HP. This resin has an average diameter of 34 μm and should provide relatively low pressure drop. However, excessive pressure should be avoided as this can damage the packing of the column (normally the resin is not damaged as it is compressible). 6. If the load has previously been partially purified by some other means (ion exchange chromatography, precipitation, and so on), the purification will be enhanced by putting the load into a good loading buffer such as 10 mM HEPES, 500 mM NaCl, 0.01% Tween 80, pH 7. This can be accomplished by dialysis (described above) of the load into the buffer or by dilution of the protein solution with the buffer until the desired pH is reached (dilution should not be less than 1 part load to 2 parts buffer). This prepared load should be 0.2 μm filtered and loaded onto the column as described above. 7. Clarification to a final 0.2-μm filtration can be accomplished at small scale by centrifugation followed by vacuum filtration with a glass fiber prefilter (provided that the protein of interest does not bind to the glass prefilter). Centrifugation at Gt=10 6 sec will remove cells and large cell debris. Small insoluble particles that can foul the column will be removed by 0.2-μm filtration. If only filtration is to be employed, the following filter train works quite well for most mammalian cell culture supernatants: Sartorius Sartopure PP2 1.2-μm filter followed by a Sartopore 2 0.45/0.2-μm filter. 8. The amount of product to load depends on a number of factors, including protein size, load composition, and chromatography resin. In this example, 0.03 mg of target protein per ml of resin was loaded. Loading more than the capacity of the column will result in loss of the product in the flow-through and wash. References 1. Janeway, C. A., Travers, P., Walprot, M., and Shlomchik M.J. (2005) Immunobiology, The Immune System in Health and Disease, pp 151. Garland Science, New York. 2. Harlow, E. and Lane, D. (1988) Antibodies: A Laboratory Manual, pp 53–244. Cold Spring Harbor Laboratory, United States of America.

Immunoaffinity Chromatography 59<br />

absorbance must be used during coupling with NHS-activated supports. Vendors<br />

who offer activated supports include GE (http://www.amershambioscienes.com),<br />

Millipore (http://www.millipore.com), BioRad (http://www.biorad.com), JT Baker<br />

(http://www.jtbaker.com), and Tosoh Bioscience (http://www.tosohbiosep.com).<br />

3. NHS-activated Sepharose HP is only available in prepacked HiTrap columns;<br />

however, NHS-activated Sepharose 4 Fast Flow is available as unpacked gel in a<br />

range of resin volumes. The unpacked gel has the advantage of allowing packing<br />

of a broad range of column sizes.<br />

4. As NHS interferes with absorbance measurements near 280 nm, A 280 nm will not be<br />

effective for determination of coupling efficiency.<br />

5. A flow rate of between 1 and 5 ml/min (30–150 cm/h) may be applicable for a<br />

2.5 cm (long) by 1.6 cm (in diameter) column of NHS-activated Sepharose HP.<br />

This resin has an average diameter of 34 μm and should provide relatively low<br />

pressure drop. However, excessive pressure should be avoided as this can damage<br />

the packing of the column (normally the resin is not damaged as it is compressible).<br />

6. If the load has previously been partially purified by some other means (ion exchange<br />

chromatography, precipitation, and so on), the purification will be enhanced by<br />

putting the load into a good loading buffer such as 10 mM HEPES, 500 mM NaCl,<br />

0.01% Tween 80, pH 7. This can be accomplished by dialysis (described above) of<br />

the load into the buffer or by dilution of the protein solution with the buffer until<br />

the desired pH is reached (dilution should not be less than 1 part load to 2 parts<br />

buffer). This prepared load should be 0.2 μm filtered and loaded onto the column<br />

as described above.<br />

7. Clarification to a final 0.2-μm filtration can be accomplished at small scale by<br />

centrifugation followed by vacuum filtration with a glass fiber prefilter (provided<br />

that the protein of interest does not bind to the glass prefilter). Centrifugation at<br />

Gt=10 6 sec will remove cells and large cell debris. Small insoluble particles that<br />

can foul the column will be removed by 0.2-μm filtration. If only filtration is to<br />

be employed, the following filter train works quite well for most mammalian cell<br />

culture supernatants: Sartorius Sartopure PP2 1.2-μm filter followed by a Sartopore<br />

2 0.45/0.2-μm filter.<br />

8. The amount of product to load depends on a number of factors, including protein<br />

size, load composition, and chromatography resin. In this example, 0.03 mg of<br />

target protein per ml of resin was loaded. Loading more than the capacity of the<br />

column will result in loss of the product in the flow-through and wash.<br />

References<br />

1. Janeway, C. A., Travers, P., Walprot, M., and Shlomchik M.J. (2005) Immunobiology,<br />

The Immune System in Health and Disease, pp 151. Garland Science,<br />

New York.<br />

2. Harlow, E. and Lane, D. (1988) Antibodies: A Laboratory Manual, pp 53–244. Cold<br />

Spring Harbor Laboratory, United States of America.

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