Introduction to Enzyme and Coenzyme Chemistry - E-Library Home
Introduction to Enzyme and Coenzyme Chemistry - E-Library Home
Introduction to Enzyme and Coenzyme Chemistry - E-Library Home
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<strong>Enzyme</strong>s are Wonderful Catalysts 33<br />
be illustrated by intramolecular reactions in organic chemistry, which is where<br />
we shall begin the discussion.<br />
3.3 Proximity effects<br />
There are many examples of organic reactions that are intramolecular: that is,<br />
they involve two or more functional groups within the same molecule, rather<br />
than functional groups in diVerent molecules. Intramolecular reactions generally<br />
proceed much more rapidly <strong>and</strong> under much milder reaction conditions<br />
than their intermolecular counterparts, which makes sense since the two<br />
reacting groups are already ‘in close proximity’ <strong>to</strong> one another. But how can<br />
can we explain these eVects<br />
A useful concept in quantitating proximity eVects is that of eVective concentration.<br />
In order <strong>to</strong> deWne the eVective concentration of a participating group<br />
(nucleophile, base, etc.), we compare the rate of the intramolecular reaction<br />
with the rate of the corresponding intermolecular reaction where the reagent<br />
<strong>and</strong> the participating group are present in separate molecules. The eVective<br />
concentration of the participating group is deWned as the concentration of<br />
reagent present in the intermolecular reaction required <strong>to</strong> give the same rate<br />
as the intramolecular reaction.<br />
I will illustrate this using data for the rates of hydrolysis of a series of phenyl<br />
esters in aqueous solution at pH 7, given in Figure 3.5. The reference reaction in<br />
this case is the hydrolysis of phenyl acetate catalysed by sodium acetate at the<br />
same pH. <strong>Introduction</strong> of a carboxylate group in<strong>to</strong> the same molecule as the<br />
ester leads <strong>to</strong> an enhancement of the rate of ester hydrolysis, which for phenyl<br />
succinate (see Figure 3.5 (3) ) is 23 000-fold faster than phenyl acetate (see<br />
Figure 3.5 (1) ). This remarkable rate acceleration is because the neighbouring<br />
carboxylate group can attack the ester <strong>to</strong> form a cyclic anhydride intermediate,<br />
shown in Figure 3.6. This intermediate is more reactive than the original ester<br />
group <strong>and</strong> so hydrolyses rapidly.<br />
Note that the rate acceleration is largest when a Wve-membered anhydride is<br />
formed, since Wve-membered ring formation is kinetically favoured over<br />
six-membered ring formation, which in turn is greatly favoured over three-,<br />
four- <strong>and</strong> seven-membered ring formation. The eVective concentration can be<br />
worked out by comparing the rates of these intramolecular reactions with the<br />
rates of the intermolecular reaction between phenyl acetate <strong>and</strong> sodium acetate<br />
in water. For phenyl succinate an eVective concentration of 4 000 m is found, so<br />
the hydrolysis of phenyl succinate proceeds much faster than if phenyl acetate<br />
was surrounded completely by acetate ions! Here we start <strong>to</strong> see the catalytic<br />
potential of proximity eVects.<br />
In the same series of phenyl esters, if the possible ring size of Wve is<br />
maintained, but a cis- double bond is placed in between the reacting groups,