Species-Specific Identification of Campylobacters by Partial 16S ...
Species-Specific Identification of Campylobacters by Partial 16S ...
Species-Specific Identification of Campylobacters by Partial 16S ...
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VOL. 41, 2003 SPECIES-SPECIFIC IDENTIFICATION OF CAMPYLOBACTERS 2539<br />
TABLE 1—Continued<br />
<strong>Species</strong> Strain Source (if known) GenBank accession no. b Reference<br />
C. upsaliensis (n 10) LMG 8851 Human, United Kingdom AF550640 This study<br />
LMG 7915 Human, United States (AF550640) This study<br />
SK H5 Canine, Germany (AF550640) This study, 33<br />
J31.000 Human, Austria (AF550640) This study<br />
LMG 8853 Human, Australia AF550641 This study<br />
H29 Canine, Germany AF550642 This study, 33<br />
H37 E/1 Canine, Germany AF550643 This study, 33<br />
H53 E/ccda Canine, Germany AF550644 This study, 33<br />
L461 Human, Austria AF550645 This study<br />
CCUG 14913 Canine, Sweden L14628<br />
C. helveticus (n 4) LMG 12639 Feline, Switzerland AF550646 This study<br />
CCUG 30563 Feline, Switzerland AF550647 This study<br />
CCUG34016 Feline, Sweden AF550648, AF550649 This study<br />
NCTC 12470 T Feline U03022<br />
C. curvus (n 5) LMG 11034 Human, United States AF550650 This study<br />
LMG 11127 Belgium AF550651 This study<br />
LMG 13936 Human, Belgium AF550652 This study<br />
ATCC 35224 T Human, United States L04313<br />
C10ETOH<br />
L06976<br />
C. concisus (n 5) LMG 7545 Human, Sweden AF550653 This study<br />
LMG 7961 Human, Sweden (AF550653) This study<br />
LMG 13937 Human, Belgium AF550654 This study<br />
ATCC 33237 T Human L04322<br />
FDC 288 Tanner<br />
L06977<br />
C. showae (n 3) LMG 12636 Human, United States AF550655 This study<br />
CCUG 11641 Human, Sweden L06975<br />
CCUG 30254 T Human, United States L06974<br />
C. gracilis (n 5) LMG 7616 United States AF550656 This study<br />
CCUG 13143 Human, United States AF550657 This study<br />
CCUG 27721 United States AF550658 This study<br />
ATCC 33236 T Human, United States L04320<br />
L37787<br />
C. rectus (n 4) LMG 7611 Human, Sweden AF550659 This study<br />
LMG 7612 Human, Sweden (AF550659) This study<br />
ATCC 33238 T Human L04317<br />
CCUG 19168 Human, Sweden L06973<br />
C. mucosalis (n 5) ATCC 49352 Porcine, Scotland AF550660 This study<br />
ATCC 49353 Porcine, Scotland AF550661 This study<br />
ATCC 49354 Porcine, Scotland AF550662 This study<br />
ATCC 43265 Porcine AF550663 This study<br />
CCUG 6822 T Porcine L06978<br />
C. hyointestinalis subsp.<br />
hyointestinalis (n 10)<br />
C. hyointestinalis subsp.<br />
lawsonii (n 6)<br />
H01/12 Human, Austria (AF097681) This study<br />
ATCC35217 Porcine, United States M65010<br />
NCTC11608 T Porcine, United States AF097689 19<br />
SVS 3038 Porcine, Denmark AF097691 19<br />
SCRL 0425 Bovine, Scotland AF097681 19<br />
SCRL 0943 Bovine, Scotland AF097682 19<br />
SVS 3035 Porcine, Denmark AF097690 19<br />
MGH 97-2652<br />
AF219235<br />
H00/108 Human, Austria AF499005 17<br />
NADC 2006<br />
M65009<br />
CCUG 27631 Porcine, Sweden AF097683 19<br />
CHY 4 Porcine, England AF097684 19<br />
CHY 5 Porcine, England AF097685 19<br />
CHY 6 Porcine, England AF097686 19<br />
CHY 7 Porcine, England AF097687 19<br />
CHY 8 Porcine, England AF097688 19<br />
C. lanienae (n 5) S-K FAVW Porcine, Austria AF550664 This study<br />
NCTC 13004 T Human, Switzerland AF043425 30<br />
UB 994 Human, Switzerland AF043424 30<br />
UB 993 Human, Switzerland AF043423 30<br />
UB 992 Human, Switzerland AF043422 30<br />
C. hominis (n 4) NCTC 13146 T Human, England AJ251584<br />
HS-C Human, England AF062492<br />
HS-B Human, England AF062491<br />
HS-A Human, England AF062490<br />
Downloaded from jcm.asm.org at UNIVERSITATSBIBLIOTHEK on June 1, 2010<br />
a A total <strong>of</strong> 135 sequences were tested.<br />
b The <strong>16S</strong> rDNA sequences submitted to GenBank are given in boldface. Campylobacter strains sharing identical sequences are indicated <strong>by</strong> parentheses and were<br />
not submitted to GenBank.<br />
c Synonymous strains derived from different culture collections.
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