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A spatially resolved study of ionized regions in galaxies at different ...

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3.3. D<strong>at</strong>a Reduction 57<br />

is required. Before compar<strong>in</strong>g the 1D count-r<strong>at</strong>e spectrum with the flux table calibr<strong>at</strong>ion it<br />

is advisable to fit a cont<strong>in</strong>uum curve to the spectra. This is specially important <strong>in</strong> the red<br />

part <strong>of</strong> the spectra (8000-11000 Å range), where absorption fe<strong>at</strong>ures from the <strong>at</strong>mosphere<br />

can depress some parts <strong>of</strong> the spectra, <strong>in</strong>troduc<strong>in</strong>g spurious fe<strong>at</strong>ures <strong>in</strong> the cont<strong>in</strong>uum <strong>of</strong> the<br />

standard star, and therefore <strong>in</strong> the f<strong>in</strong>al flux r<strong>at</strong>io curve.<br />

Figure 3.10 shows an example <strong>of</strong> the absorption effects <strong>in</strong> the spectrum <strong>of</strong> the standard<br />

star BD+17 ◦ 4708. The upper panel shows the absolute flux distribution taken from the<br />

standard star table. Notice the almost absence <strong>of</strong> fe<strong>at</strong>ures <strong>in</strong> the cont<strong>in</strong>uum. The lower panel<br />

shows <strong>in</strong> solid (blue) l<strong>in</strong>e the 1D spectrum (<strong>in</strong> counts) extracted follow<strong>in</strong>g the steps described<br />

above and <strong>in</strong> dashed (green) a fitted cont<strong>in</strong>uum. It can be clearly seen the strong <strong>at</strong>mospheric<br />

w<strong>at</strong>er-vapour absorptions bands along the spectrum, specially <strong>in</strong> the range where the sulphur<br />

emission l<strong>in</strong>es [Siii] λλ 9069,9532 Å l<strong>in</strong>es are loc<strong>at</strong>ed. The fitted cont<strong>in</strong>uum is then used to<br />

obta<strong>in</strong> the flux r<strong>at</strong>io between the counts and the flux calibr<strong>at</strong>ed table.<br />

It is advisable to have several measurements <strong>of</strong> <strong>different</strong> standard stars along the night,<br />

or several exposures <strong>of</strong> the same star <strong>at</strong> <strong>different</strong> airmasses <strong>in</strong> order to have a represent<strong>at</strong>ive<br />

sensitivity function. Then, an average sensitivity function is computed from those with the<br />

same <strong>in</strong>strumental setup. If the conditions <strong>of</strong> the <strong>at</strong>mosphere changed significantly from one<br />

star to another, a gray shift over the the sensitivity function can be performed. This is done<br />

by shift<strong>in</strong>g the d<strong>at</strong>a so th<strong>at</strong> the mean sensitivity <strong>of</strong> each star is the same as the star with<br />

the gre<strong>at</strong>est mean sensitivity. This compens<strong>at</strong>es for variable grey ext<strong>in</strong>ction due to clouds.<br />

Sometimes it is necessary to delete one star if its slope/shape is very <strong>different</strong> from others.<br />

Unfortun<strong>at</strong>ely, our set <strong>of</strong> d<strong>at</strong>a had only one observ<strong>at</strong>ion <strong>of</strong> a standard star per night, so<br />

we had to derive a flux r<strong>at</strong>io for each wavelength range only from one curve. Despite this<br />

fact, after flux calibr<strong>at</strong>ion, <strong>in</strong> the overlapp<strong>in</strong>g region <strong>of</strong> the spectra taken for both setups,<br />

the agreement <strong>in</strong> the average cont<strong>in</strong>uum level <strong>in</strong> a fiber-to-fiber comparison was about 5 per<br />

cent.<br />

3.3.7 Sky-subtraction<br />

The emission from the Earth’s <strong>at</strong>mosphere contributes to the detected signal. Sky emission<br />

l<strong>in</strong>es can be easily identified <strong>in</strong> the RSS d<strong>at</strong>a as vertical l<strong>in</strong>es. Many IFUs provide special<br />

fibers placed with an <strong>of</strong>fset from the observed object to obta<strong>in</strong> a clear sky spectrum. When<br />

these fibers are not available or the target is surrounded by contam<strong>in</strong><strong>at</strong><strong>in</strong>g emission from<br />

adjacent objects, the usual method consists on tak<strong>in</strong>g an additional exposure <strong>of</strong> the nearby<br />

sky after or before the exposure <strong>of</strong> the target itself, bear<strong>in</strong>g <strong>in</strong> m<strong>in</strong>d th<strong>at</strong> there should not<br />

be any significant contam<strong>in</strong><strong>at</strong><strong>in</strong>g emission from other sources. If the sky is derived form an<br />

external sky-frame, the sky subtraction should be performed after the flux calibr<strong>at</strong>ion. If it<br />

is derived from the same d<strong>at</strong>aset, the substraction can be done before. If the target does not<br />

fill all the FOV <strong>of</strong> the IFU, E3D can be used <strong>in</strong> a similar way as for the sky subtraction <strong>of</strong>

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