Boyer diss 2009 1046..

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and scanning resolution – these data are available upon request). These data were visualized with the software Amira 4.1.2-1, Aviso 5.0, and Image J and were critical for determining and illustrating patterns of articulation between carpal, tarsal, and metapodial bones. They were also useful for estimating joint positions and ranges of joint motion. Measurements and analysis Various measurements were taken (1) on physical specimens and casts using digital calipers, (2) on photographs using the software Sigma Scan Pro 5.0, or (3) on surfaces created from HRxCT scan images using the software Amira 4.1.2-1 and Aviso 5.0. These measurements are presented in tables organized by bone or region of a bone. Along with raw measurements, various natural logarithm shape ratios are often presented. The names of these measurements and ratios are abbreviated in table headings. These abbreviations and the measurements they represent are defined in the abbreviations section above. Measurements recorded here are used to assist in descriptions of the shapes of bones and to compare shape and size differences among bones of Plesiadapis cookei (UM 87990) and those of other taxa. In addition to providing a set of “new” measurements, all measurents used and defined by Sargis (2002a, b) and Szalay and Dagosto (1980) are recorded here. Some or all of their data are incorporated into analyses. Various analyses were undertaken using the programs SPSS 11.0 and PAST. Univariate comparisons.—Measurements and shape indices of P. cookei are compared to those of samples of P. tricuspidens and other plesiadapids using students t- test (Sokal and Rohlf, 1997). These analyses assume UM 87990 represents the mean for P. cookei, and determine the probability that distributions of measurements for other 278
plesiadapid samples have the same mean. When linear or area measurements are compared among taxa, the values were first natural-log transformed. This was done because variance in measurements of biological populations is typically only meaningful in proportion to the average value of the measurements for that population. A distributional result of this fact is that populations of biological measurements are theoretically (even if sometimes statistically imperceptibly) right skewed (Sokal and Rohlf, 1997; Gingerich, 2000). Logarithms express metrical data in terms of proportions and thereby provide a data format that can be analyzed to meaningfully address biological questions. For instance, the observation that an elephant population has absolutely greater variance in body mass than a mouse population is not very informative. However, finding a difference in variance in logarithms of body mass would deserve further consideration. Multivariate comparisons.—Principal coordinates (PC) analyses of Euclidean distance matrices are used to compare various sets of measurements of P. cookei to those of samples of extant and fossil taxa. Specifically, PC analyses are undertaken on variables sampling aspects of the skeleton in six different ways including variables sampling (1) the distal end of the humerus, (2) metacarpals, (3) astragalus, (4) calcaneum, (5) aspects of the vertebral column, and (6) combinations of long bone and body segment lengths. Size-standardized variables were created for these analyses by dividing each measurement for a given specimen by the geometric mean of all, or a subset, of the linear measurements for that specimen. This method of size-standardization has been shown to be successful by numerous researchers (e.g., Mosimann and Malley, 1979, Jungers et al., 1995; Hamrick et al., 1999). Any measurements that could conceivably have values of 279
Page 1 and 2:
NEW CRANIAL AND POSTCRANIAL REMAINS
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Stony Brook University The Graduate
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postcranial anatomy more accurately
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Table of Contents List of Figures .
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Zygomatic. . . . . . . . . . . . .
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Zygomatic. . . . . . . . . . . . .
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Humerus . . . . . . . . . . . . . .
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Description . . . . . . . . . . . .
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Description . . . . . . . . . . . .
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Craniodental material of Plesiadapi
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Figure 2.25. MNHN CR 965 Plesiadapi
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Figure 4.24. UM 87990 Plesiadapis c
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Table List Chapter 2 Table 2.1. Num
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Table 4.30. Caudal vertebrae measur
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CHAPTER 1: INTRODUCTION Plesiadapif
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primates, sharing many dental featu
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were acquired. Specifically, the
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of the plesiadapiform skeleton. Ext
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Gervais, M.P., 1877. Enumération d
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Szalay, F.S., 1972. Cranial morphol
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CHAPTER 2: A REEVALUATION OF CRANIA
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Information on the cranium of basal
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petrosal bulla predicts that a sutu
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History of descriptive study of ple
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Gingerich (1971) rebutted Szalay (1
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9c, Gingerich (1976) labeled a groo
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portion of the bulla medial to the
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Bloch and Silcox (2006) described t
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MATERIALS AND METHODS Material exam
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whitening, dark and light areas on
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SYSTEMATIC PALEONTOLOGY Class MAMMA
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efore meeting a large, anteroposter
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The canine is a simple, single-root
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existence and/or nature of contacts
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outlined. This includes description
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eneath it while also extending post
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y a pair of parallel grooves (Fig.
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the skull (Fig. 2.1). The length of
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margin clearly had a posteriorly pr
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groove measures about 0.29 mm in di
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2.13: 50). The suture with the supr
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preserved (Fig. 2.15: 55). In fact,
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the posterior septum, a deeply inci
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Plesiadapis tricuspidens MNHN CR 12
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is roughly 2.8 mm long. Medial to t
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is not convoluted like many other s
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110) and the only squamosal/alisphe
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two regions for the internal jugula
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ventral to the sinuous suture (132)
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provides measurements of these and
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of the promontorium of the Pellouin
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seen on the HRxCT scan is expressed
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primates, as well as treeshrews and
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canaliculus are present on the sept
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it is missing from the other side o
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observations and interpretations ma
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REFERENCES Beard, K.C., 1993. Phylo
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Russell, D.E., 1959. Le crâne de P
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TABLES Table 2.1. Numerical list of
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81 - Occipital/petrosal suture (Fig
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Table 2.2. Abbreviations for crania
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Table 2.3a. Petrosal features of pl
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Table 2.4. List of cranial measurem
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Shape variables (Table 2.6) ac/GM -
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Table 2.5. continued Specimen MNHN
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Appendix Table 2.1. Specimens scann
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Fig. 2.39 - bs, Ptr, rtp, s1, s2 Fi
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Figure 2.1. UALVP 46685 Pronothodec
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Figure 2.8. USNM 309902 Nannodectes
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Figure 2.9. USNM 309902 Nannodectes
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Figure 2.10. USNM 309902 Nannodecte
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Figure 2.15. AMNH 17388 Nannodectes
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Figure 2.16. AMNH 17388 Nannodectes
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Figure 2.22. MNHN CR 965, Plesiadap
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Figure 2.26. Pellouin skull Plesiad
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Figure 2.30. MaPhQ 33y Adapis paris
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Figure 2.32. SBU MRd-12 Sciurus car
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Figure 2.33. UMMZ 58983 Tupaia glis
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Figure 2.34. Boyer coll. Marmota mo
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Figure 2.35. UMMZ TS13 Lagostomus m
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Figure 2.36. AMNH 41527 Lagostomus
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Figure 2.37. AMNH 185638 Indri indr
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Figure 2.38. USNM 482353 Ignacius c
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Figure 2.39. UM 108207 Acidomomys h
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Figure 2.40. Reconstruction of ples
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CHAPTER 3: DESCRIPTION OF THE FIRST
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these species. Changing ecological
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Institutional abbreviations AMNH, A
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Methods of examination and document
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SYSTEMATIC PALEONTOLOGY Class MAMMA
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Premaxilla and premaxillary dentiti
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nerve and vessels in life (Fig. 3.5
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identifiable. No ethmoid foramina c
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process is quite large, projecting
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vestibuli. This groove’s point of
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9: 40). The right side reveals an a
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e seen as a wedge-shaped, rugose de
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process appears as solid bone. Admi
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16) for P. tricuspidens and Rose (1
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DENTAL FUNCTIONAL MORPHOLOGY OF P.
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Lower premolar molarization As indi
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SUMMARY AND CONCLUSION The skull of
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REFERENCES Bloch, J.I., Boyer, D.M.
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TABLES Table 3.1. List of anatomica
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Table 3.2. Anatomical abbreviations
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Table 3.3. Size comparison among pl
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Table 3.4 continued. European plesi
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Figure 3.1. Cranium of Plesiadapis
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Figure 3.3. Right maxillary teeth (
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Figure 3.4. Cranium of Plesiadapis
Page 255 and 256: Figure 3.5. Cranium of Plesiadapis
Page 259 and 260: Figure 3.8. Fragment from right nuc
Page 261 and 262: Figure 3.9. Right promontorium of P
Page 265 and 266: Figure 3.12. Right dentary of Plesi
Page 267 and 268: Figure 3.14. A, Plot of relief inde
Page 269 and 270: CHAPTER 4: THE FIRST KNOWN SKELETON
Page 271 and 272: among plesiadapiforms (e.g., Szalay
Page 273 and 274: Institutional and collections abbre
Page 275 and 276: CaL - capitulum (of humerus) antero
Page 277 and 278: HSV - head shape variable = ln(DEW/
Page 279 and 280: MSD - mid-shaft dorsoventral or ant
Page 281 and 282: Ry - ray (as in “digit ray”) S-
Page 283 and 284: History of descriptive study of the
Page 285 and 286: illustrations of this material, exc
Page 287 and 288: astragalus and calcaneum was highly
Page 289 and 290: discussion of the femur indicates t
Page 291 and 292: supinator crests. He also noted tha
Page 293 and 294: that it may not even be an archonta
Page 295 and 296: unstudied material. Specifically, h
Page 297 and 298: 5321), some metapodials (MNHN R 529
Page 299 and 300: Gingerich and Gunnell (1992) publis
Page 301 and 302: prehensility they provide, is an in
Page 303 and 304: euarchontans (Fig. 1.1). Their anal
Page 305: for comparison. These include isola
Page 309 and 310: Organization of results Each bone i
Page 311 and 312: Bloch and Boyer (2002) and N. inter
Page 313 and 314: clavicle reflects some basic aspect
Page 315 and 316: Humerus Description.—The right an
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Page 319 and 320: cookei is absolutely longer than an
Page 321 and 322: tuberosity. This crest probably del
Page 323 and 324: olecranon process to estimate its t
Page 325 and 326: distinct, convex distal radial face
Page 327 and 328: of the midcarpal joint), and its pr
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Page 331 and 332: matches the opposing facet on the t
Page 333 and 334: mobility at the trapezoid-trapezium
Page 335 and 336: Function.—The three proximal carp
Page 337 and 338: the bone presently being described:
Page 339 and 340: the “set 2” MC II is a larger,
Page 341 and 342: differs from MC II and III in havin
Page 343 and 344: even more pronounced. The distal en
Page 345 and 346: etween the distal carpals and the
Page 347 and 348: have stouter shaft diameters for th
Page 349 and 350: difference makes them more like kno
Page 351 and 352: antipronograde clinging postures, o
Page 353 and 354: foramina, and faces slightly proxim
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the thigh (Gambaryan, 1974). The ha
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The femoral shaft is smooth, lackin
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lacking a lateral extension of its
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The anteromedial side of the tibial
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fibular notch and the strong crest
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to the peroneal surface. The perone
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could even be described as having t
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Function.—The functional features
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flexor fibularis groove surface. Ex
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tubercle, which is centrally locate
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Cuboid Description.—The right cub
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Ectocuneiform Description.—A left
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Metatarsals Hallucal metatarsal des
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articulation with the entocuneiform
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medial side facet on MT IV from a v
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Vertebral column Vertebral column d
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measurements, see caption of Fig. 4
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transverse processes, and the poste
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taxa appear to have slightly more p
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dorsoventrally than craniocaudally.
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The zygapophyses increase in size b
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vertebrae. It is also similar to th
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identifications have been reversed.
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preserved. The ribs are slender and
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Carpolestes simpsoni (UM 101963) an
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third metacarpal, similar to arbore
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autapomorphy, because it appears th
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Jenkins (1974) found that Tupaia gl
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Nannodectes and other plesiadapids,
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are consistent with more frequent u
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differences generated from informat
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Perry, M. Silcox, R. Secord and man
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ubriventer: implications for the fu
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Linnaeus, C., 1758. Systema naturae
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Stern, J.T.,Jr., 1988. Essentials o
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Table 4.3A. Measurements of the pro
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Table 4.3C. Comparative shape varia
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Table 4.5A. Measurements and shape
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Table 4.10. Measurements and shape
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Table 4.13. Measurements of plesiad
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Table 4.17B. Measurements of the di
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Table 4.18B. Measurements of the di
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Table 4.20B. Measurements 11-18 of
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Table 4.21A. Measurements 1-10 and
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Table 4.23. Measurements and shape
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Table 4.35. Body segment lengths (m
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Table 4.37A. Parameters for Gingeri
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Table 4.38C. Summary of plesiadapid
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Appendix Table 4.1B. Plesiadapis co
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Appendix Table 4.3. Other plesiadap
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Figure 4.2. Plesiadapis cookei (UM
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Figure 4.4. Plot of principal coord
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Figure 4.6. Surface reconstructions
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Figure 4.10. Surface reconstruction
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Figure 4.14. Plesiadapis cookei or
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Figure 4.17. Plot of principal coor
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Figure 4.30 472
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Figure 4.31. Measurements of astrag
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Figure 4.33 476
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Figure 4.34. Measurements of calcan
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Figure 4.40. Stereophotographic vie
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Figure 4.46. 490
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Figure 4.47 492
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Figure 4.50. 496
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INTRODUCTION Bloch et al. (2007) an
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have a lacrimal bone that retains i
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Institutional abbreviations AMNH, A
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level cladogram. A total of 33 cran
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plesiadapiform Ignacius graybullian
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RESULTS Phylogenetic reconstruction
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Optimization of postcranial traits
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Therefore, character optimization r
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carpolestid bulla is not split into
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2008). I therefore changed the codi
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Re-coding and optimization of crani
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and paromomyids. This, however, is
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REFERENCES Beard, K.C., 1989. Postc
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Novacek, M.J., 1986. The skull of l
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TABLES Table 5.1. Dental characters
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Table 5.2. Dental character matrix.
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asisphenoid and basioccipital bones
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111 (p3). Deltopectoral crest of hu
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158 (p50). Metatarsal I facet on en
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Table 5.4C. Postcranial characters
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Table 5.7. Posterior carotid forame
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Figure 5.2. 542
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Figure 5.3 544
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Figure 5.4. Plot of posterior carot
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ostral end of the nasals) and prema
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its body size would fit predictions
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vertically-to-caudally projecting t
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More generally speaking, this disse
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Figure 6.1. CT reconstruction of Pl
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BIBLIOGRAPHY Alexander, R.M., Jayes
Page 588 and 589:
Coleman, M. N. and Boyer, D.M. 2008
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Godinot, M., Beard, K.C., 1991. Fos
Page 592 and 593:
MacPhee, R.D.E., 1981. Auditory Reg
Page 594 and 595:
Savage, D.E., Russell, D.E., 1983.
Page 596 and 597:
Szalay, F.S., Drawhorn, G., 1980. E
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