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Optimizing the Analysis of Volatile Organic Compounds

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Abundance<br />

320000<br />

280000<br />

240000<br />

200000<br />

160000<br />

120000<br />

80000<br />

40000<br />

Figure 33.<br />

Optimize MS tuning to increase sensitivity.<br />

A - Before tune<br />

B - After tune<br />

Time 1.00 1.40 1.80 2.20 2.60 3.00 3.40 3.80 4.20 4.60 5.00 5.40 5.80<br />

Leak Checks: The MS is a powerful tool for determining <strong>the</strong> presence <strong>of</strong> leaks in <strong>the</strong><br />

GC/MS system because it is able to detect air and water. Check for leaks by turning on <strong>the</strong><br />

PFTBA valve and scanning for m/z 69, 18, and 28. By using <strong>the</strong> base peak for PFTBA (m/z<br />

69), a relative concentration <strong>of</strong> water/nitrogen can be determined. The combined relative<br />

abundance <strong>of</strong> 18/28 to 69 should be between 0.1% and 3%. Figure 34 shows an air/water<br />

value <strong>of</strong> 0.14% (0.05+0.09). If <strong>the</strong> value is below 0.1%, compare <strong>the</strong> current total abundance<br />

<strong>of</strong> ion 69 with its abundance at <strong>the</strong> last leak check. Instruments with large leaks have<br />

reduced sensitivity for 69 and may show abundances <strong>of</strong> 0 for lower ions, suggesting <strong>the</strong>re is<br />

no leak. This is due to saturation <strong>of</strong> <strong>the</strong> detector. If a leak is present, <strong>the</strong> instrument will not<br />

tune. An MS with a diffusion pump should be allowed more time to equilibrate because it is<br />

less efficient at removing low molecular weight contamination. After this preliminary<br />

air/water check, begin tuning <strong>the</strong> instrument. After <strong>the</strong> instrument passes tuning, check again<br />

for air and water.<br />

Figure 34.<br />

An initial air/water check on an Agilent 5971A MS, before tuning.<br />

33<br />

www.restekcorp.com

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