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(SAV) User Guide 15020619 D - Illumina

(SAV) User Guide 15020619 D - Illumina

(SAV) User Guide 15020619 D - Illumina

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If the Sequencing Analysis Viewer does not display metrics, check whether you pointed<br />

the Sequencing Analysis Viewer to a valid Run Folder, and whether you have the proper<br />

permissions to view the data. The Sequencing Analysis Viewer will display an error<br />

message if there is no valid Run Folder.<br />

Sequencing Analysis Viewer Files<br />

Sequencing Analysis Viewer uses the following files:<br />

} runinfo.xml files.<br />

} runparameters.xml (only for HiSeq ® /HiScan ® runs).<br />

} The Interop files can be found in the directory: \InterOp. The Interop<br />

files provide the following information:<br />

• Extraction Metrics<br />

• Quality Metrics<br />

• Error Metrics<br />

• Tile Metrics<br />

• Corrected Intensity Metrics<br />

• Control Metrics<br />

} Thumbnails (optional).<br />

7<br />

Part # <strong>15020619</strong> Rev D

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