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Thermoelectric Properties of Fe0.2Co3.8Sb12-xTex ... - Physics

Thermoelectric Properties of Fe0.2Co3.8Sb12-xTex ... - Physics

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Unzipping Force Analysis to determine binding specificity <strong>of</strong><br />

RNA Polymerase to T7A1 promoter sequence<br />

Sudeesh K †,1 , Subho Ghosh* ,1 , Dipankar Chatterji*, A K Sood †<br />

† Department <strong>of</strong> <strong>Physics</strong>, Indian Institute <strong>of</strong> Science<br />

* Molecular Biophysics unit, Indian Institute <strong>of</strong> Science<br />

Abstract:- Transciption is one <strong>of</strong> the important steps in the central dogma <strong>of</strong> molecular biology. Using<br />

RNA Polymerase <strong>of</strong> Escherichia coli and T7A1 promoter from T7 phage as the model system, we<br />

probe the sequence dependence <strong>of</strong> the unzipping force <strong>of</strong> transcription at the single molecule level. We<br />

unzip wild type and various mutated sequences <strong>of</strong> DNA with RNA-polymerase attached to each <strong>of</strong><br />

them and determine the change in the binding force at the beginning <strong>of</strong> the unzipping <strong>of</strong> the<br />

transcription bubble. We thus determine the role <strong>of</strong> each individual base pair <strong>of</strong> the consensus<br />

promoter sequence affecting the binding <strong>of</strong> RNA-Polymerase to the promoter.<br />

1) S.K and S.G contributed equally for the work

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