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ALCF Science 1 - Argonne National Laboratory

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argonne leadership computing facility<br />

Materials <strong>Science</strong><br />

Large-Scale Condensed Matter and Fluid Dynamics Simulations<br />

Simulating Brain Blood Flow to Better Diagnose, Treat Aneurisms<br />

Patient-specific brain blood flow simulations are aiming to improve<br />

diagnosis and treatment of aneurisms. Researchers from University<br />

College London have made significant progress in studying three<br />

patients’ internal carotid artery aneurysms. In conducting the<br />

simulations, the researchers used HemeLB, a sparse-geometry<br />

optimized lattice Boltzmann code, on Intrepid, the 557-teraflops IBM<br />

Blue Gene/P, at the <strong>Argonne</strong> Leadership Computing Facility. Intrepid<br />

allows flow calculation at speeds fast enough to be clinically useful.<br />

The simulations involved a number of steps—acquiring angiography<br />

data, transferring it to local resources, pre-processing locally, staging<br />

to remote resources for simulation, and reporting (using interactive<br />

steering and visualization).<br />

INCITE Allocation:<br />

40 Million Hours<br />

INCITE PROGRAM<br />

37<br />

0.00<br />

0.03 0.05 0.08 0.10 (m/s) 0.00 0.25 0.50 0.75 1.00<br />

(Pa)<br />

90.00 92.50 95.00 97.50 100.00<br />

(mmhg)<br />

0.00<br />

0.25<br />

0.50<br />

0.75<br />

1.00<br />

(Pa)<br />

A visualization of one<br />

aneurysm. Top Left: volume<br />

rendered velocity. Top<br />

Right: volume-rendered<br />

von Mises stress. Bottom<br />

Left: external pressure and<br />

streaklines. Bottom Right:<br />

external von Mises stress<br />

and streaklines.<br />

Contact Peter Coveney<br />

University College London | p.v.coveney@ucl.ac.uk

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