JUQUEEN - Prace Training Portal

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<strong>JUQUEEN</strong> – Application Stack I/O libraries HDF5 MPI I/O SIONlib netCDF Tools DDT Scalasca (1.4.2) Totalview hpctoolkit (5.2.1) Score-P Vampir PAPI (4.4.0) Tau (2.21.2) 28
Running Simulations – Batch System Execution of applications managed by LoadLeveler – Users submit jobs using a job command file – LoadLeveler allocates computing resources to run jobs – The scheduling of jobs depends on • Availability of resources • Job priority (jobs with lager core counts are privileged) – Jobs run in queues (job classes) • Classes chosen by LoadLeveler according to core count of job • Jobs requesting the full system (currently 8 racks) run on dedicated days 29
Page 1 and 2: JUQUEEN: Application Stack and Best
Page 3 and 4: Outline Supercomputing@JSC Jülich
Page 5 and 6: Jülich Supercomputing Centre (JSC)
Page 7 and 8: Integration of JSC in Networks and
Page 9 and 10: Supercomputer Systems@JSC: Dual Con
Page 11 and 12: User Support @ JSC - Overview Cross
Page 15 and 16: JUQUEEN - System Architecture IBM B
Page 19 and 20: Accounting Billing - Jobs charged f
Page 21 and 22: Module Environment Module concept -
Page 23 and 24: Module Environment Six module categ
Page 25 and 26: Module Environment $ module help ar
Page 27: JUQUEEN - Application Stack Mathema
Page 31 and 32: LoadLeveler - Job Command File ASCI
Page 33 and 34: LoadLeveler - Blue Gene/Q Keywords
Page 35 and 36: Running Simulations - runjob Comman
Page 37 and 38: Running Simulations - MPI/OpenMP Co
Page 39 and 40: Monitoring of Jobs • LoadLeveler
Page 43 and 44: Compilers for CN Language Compiler
Page 45 and 46: Basic Compiler Options - XL Compile
Page 47 and 48: MPI Message-Passing Interface - Bas
Page 49 and 50: Creating static Libraries Preferred
Page 53 and 54: Example: Compilers Diagnostics subr
Page 55 and 56: Quad floating Point eXtension unit
Page 57 and 58: IBM XL Compiler Support for QPX Usa
Page 59 and 60: IBM XL QPX Intrinsics • New intri
Page 61 and 62: Thread Level Speculation (TLS) •
Page 63 and 64: Thread Level Speculation Loop: save
Page 65 and 66: Transactional Memory • Enabling b
Page 67 and 68: Choosing Shape and Mapping • Shap
Page 69 and 70: MPI Tuning - BG/Q Extensions Blue G
Page 71 and 72: Time (s) File I/O - Task-local File
Page 73 and 74: SIONlib - An Alternative to Task-Lo
Page 75 and 76: SIONlib - An Alternative to Task-Lo
Page 77 and 78: Performance Analysis Goal: Detectio
Page 79 and 80:
Scalasca Toolset for callpath and c
Page 81 and 82:
Outline Supercomputing@JSC Jülich
Page 83 and 84:
Using Debuggers Prepare executable:
Page 85:
Thank You! JSC user and application
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JUQUEEN - Prace Training Portal

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