Partition function for RNA secondary structure
Partition function for RNA secondary structure
Partition function for RNA secondary structure
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Energy minimization <strong>for</strong> several<br />
species<br />
• “Prediction of hybridization and melting <strong>for</strong><br />
double-stranded nucleic acids”, Dimitrov, Zuker,<br />
Biophysical Journal 87:215-226 (2004) –<br />
computation of Boltzmann partition <strong>function</strong><br />
• “Secondary <strong>structure</strong> prediction of interacting<br />
<strong>RNA</strong> molecules”, Andronescu, Zhang, Condon,<br />
JMB 345:987-1001 (345)<br />
Peter Clote<br />
July 2007