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Developing 384-plex SNP marker sets for breeding and ... - icrisat

Developing 384-plex SNP marker sets for breeding and ... - icrisat

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SSR <strong>marker</strong>s have some disadvantages<br />

• High polymorphism<br />

rate, but having<br />

many alleles makes<br />

precise scoring<br />

difficult<br />

• SSR data is difficult<br />

to merge across labs<br />

<strong>and</strong> groups<br />

• Not easy to run in a<br />

high-throughput<br />

system due to<br />

limitations in<br />

multi<strong>plex</strong> levels<br />

www.gramene.org

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