on outsourcing and data management - icrisat
on outsourcing and data management - icrisat on outsourcing and data management - icrisat
Getting data • Your responsible for your own data you can’t expect the sequencer to keep a copy, We lodge everything in a subversion repository when it comes in. Check your organisations backup strategy. • While your are at it who has the library you were sequencing if the data is good can you go back to get more sequence from the library • Naming things is important • There is a lot of data but not a stupid amount but be careful to take account of the fact that you might need lots of analysis runs on the same data and you may want to hang on to them for a bit. They can however be offline. USB disks are cheep ! Sending them is also a good way to network big data sets.
Processing and analysis • We discussed many of the issues but realise that the whole thing is moving on. The technologies are changing and the analysis and visualization methods are evolving in response. • The published literature is often out of date. • There are a number of user groups either physical or online make use of them but also be sceptical. Sometimes those who make most noise are not the ones who actually know the time of day. • This might include me !!!!!! • Consider setting up your own user group if this helps. You can do a lot even through something like Webex.
- Page 1 and 2: Outsourcing and Data handling Issue
- Page 3 and 4: Outsourcing • We don’t own a ma
- Page 5 and 6: What are we sequencing and why ?
- Page 7: Once you have made the choice • M
- Page 11: NGS Meetings
Processing <strong>and</strong> analysis<br />
• We discussed many of the issues but realise that the whole<br />
thing is moving <strong>on</strong>. The technologies are changing <strong>and</strong> the<br />
analysis <strong>and</strong> visualizati<strong>on</strong> methods are evolving in resp<strong>on</strong>se.<br />
• The published literature is often out of date.<br />
• There are a number of user groups either physical or <strong>on</strong>line<br />
make use of them but also be sceptical. Sometimes those who<br />
make most noise are not the <strong>on</strong>es who actually know the time<br />
of day.<br />
• This might include me !!!!!!<br />
• C<strong>on</strong>sider setting up your own user group if this helps. You can<br />
do a lot even through something like Webex.
Change language