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LIFE01200604005 Shri Somnath Ghosh - Homi Bhabha National ...

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14 S. <strong>Ghosh</strong> et al. / Mutation Research 716 (2011) 10–19<br />

Fig. 4. Phosphorylation of ATR at 4 h after exposure to 1 Gy -rays or carbon irradiation in A549 cells. (A) Representative image showing p-ATR foci 4 h after irradiation. Each<br />

phospho-ATR antibody was indirectly labeled with Molecular Probe 488 secondary antibody (green) and cells were mounted with ProLong Gold antifede with DAPI (blue). All<br />

images were captured using Carl Zeiss confocal microscope with the same exposure time. (B) Graph represents average numbers of foci per cell, percentage of cells showing<br />

the foci is marked above the bars. (C) Graph represents relative intensity of p-ATR as determined by ImageJ software. At least 100 cells per experiment were analyzed from<br />

three independent experiments. Data represents means ± SD of three independent experiments. (For interpretation of the references to color in this figure legend, the reader<br />

is referred to the web version of the article.)<br />

JNK did not show any activation after -rays irradiation (Fig. 7B).<br />

Interestingly, after carbon irradiation the activation pattern of these<br />

kinases was exact opposite. ERK was not activated at all after carbon<br />

irradiation (Fig. 7A) while JNK showed marginal activation at<br />

15 min that remained so till 1 h (Fig. 7B). The expression of total<br />

ERK did not change during the same period in the cells that had<br />

been exposed to either -rays or carbon beam.<br />

3.7. Apoptosis<br />

At 4 h after irradiation, morphological features of DAPI stained<br />

apoptotic nuclei were scored and many apoptotic nuclei were<br />

observed in cells irradiated with carbon ion but not in -rays irradiated<br />

cells (Fig. 8A and B).<br />

Upregulation of Bax expression was also observed as early as<br />

2 h after carbon ion irradiation indicating apoptotic tendency of the<br />

cells (Fig. 8C). -Rays irradiated cells did not show any upregulation<br />

of Bax (data not shown).<br />

4. Discussion<br />

Although 1 Gy dose of carbon ions was three times more toxic to<br />

the cells than -rays, both produced same number of -H2AX foci,<br />

indicators of DNA double strand breaks. This discrepancy between<br />

observed cytotoxicity and estimated -H2AX foci after high LET<br />

radiation has also been reported previously [28]. Since our aim<br />

was to find out signaling differences arising from DNA damaged<br />

by either of the radiations, we chose 1 Gy of both radiations rather<br />

than their equitoxic doses. The observed decrease in number of -<br />

H2AX foci 4 h after -rays irradiation indicates repair of damage<br />

and is supported by nearly 100% survival. However, the decrease in<br />

-H2AX foci after carbon ion irradiation was definitely not indicative<br />

of repair because the cell survival data contradicts the fact<br />

(Fig. 2). Foci formation is a biochemical kinetic process involving<br />

both formation and loss of foci [29], there is never an exact one-toone<br />

correspondence between the number of DSB and foci [30]. In<br />

addition, multiple DSB may be visible as a single focus due to DNA<br />

supercoiling [31]. For heavy ions, clustering of damage including<br />

DSB along the trajectory of the ion leads to further complexities<br />

in relating foci counts to damage numbers [14]. However, since<br />

total intensity of -H2AX was yet high at 4 h in carbon irradiated<br />

cells, indicating its phosphorylated state, it may represent sites of<br />

increased DNA damage after carbon irradiation, arising from misrepair<br />

or incomplete repair [32,33].<br />

Similar number of -H2AX foci at 15 min after both high and low<br />

LET radiations indicated that initial events might not differ much<br />

with the radiation quality. Activation of other molecules including<br />

ATM, ATR, BRCA1, Chk1, Chk2 and Bax was therefore followed

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