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LIFE01200604005 Shri Somnath Ghosh - Homi Bhabha National ...

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S. <strong>Ghosh</strong> et al. / Mutation Research 716 (2011) 10–19 13<br />

Fig. 3. Phosphorylation of ATM at 4 h after exposure to 1 Gy -rays or carbon irradiation in A549 cells. (A) Representative image showing p-ATM foci 4 h after irradiation.<br />

Each phospho-ATM antibody was indirectly labeled with Molecular Probe 488 secondary antibody (green) and cells were mounted with ProLong Gold antifede with DAPI<br />

(blue). All images were captured using Carl Zeiss confocal microscope with the same exposure time. (B) Graph represents average numbers of foci per cell, percentage of<br />

cells showing the foci is marked above the bars. (C) Graph represents relative intensity of p-ATM as determined by ImageJ software. At least 100 cells per experiment were<br />

analyzed from three independent experiments. Data represents means ± SD of three independent experiments. (For interpretation of the references to color in this figure<br />

legend, the reader is referred to the web version of the article.)<br />

DNA damage response network that include H2AX, BRCA1, Chk1/2<br />

and p53. Phospho ATM foci and intensity were scored at 4 h after -<br />

rays or carbon irradiation. At 4 h after gamma irradiation, 88% cells<br />

showed that pATM foci with the average foci per cell was 6.5 ± 4.4,<br />

as against 25% control cells (3.4 ± 1.67) (Fig. 3). Like -H2AX foci,<br />

small number of ATM foci 4 h after -rays irradiation indicates that<br />

by 4 h most of the repair has taken place. However, at 4 h after carbon<br />

ion irradiation only 52% of the cells showed the foci but the<br />

average pATM foci per cell (21 ± 10) was much higher as compared<br />

to 4 h after -rays (Fig. 3). Total intensity levels of phospho ATM<br />

matched with the number of foci observed (Fig. 3C).<br />

ATR, another important DNA damage sensor, which is known to<br />

respond late to the IR induced damage, was also looked for its activation<br />

at 4 h. After -rays irradiation, 53% of the cells showed ATR<br />

foci (2.8 ± 1.64), as against no foci in any of the control-unirradiated<br />

cells. On the other hand, 4 h after carbon ion irradiation although<br />

only 10% of cells showed the foci, the average foci per cell (7 ± 4.5)<br />

were thrice that of -rays irradiated cells (Fig. 4). Total intensity<br />

levels of phospho ATR matched with the number of foci observed<br />

(Fig. 4C).<br />

3.4. BRCA1 foci<br />

Another important protein involved in DSB repair is the tumor<br />

suppressor protein BRCA1 which is phosphorylated by ATM and is<br />

also a part of RIF. 4 h after -rays irradiation, 55% cells displayed<br />

BRCA1 foci (13 ± 8) while 100% of carbon irradiated cells displayed<br />

BRCA1 foci (7.5 ± 0.64) (Fig. 5) and the foci, although less in number<br />

were larger in size than -ray induced foci. The intensity of<br />

phosphorylation of BRCA1 as determined by ImageJ software was<br />

higher in carbon irradiated cells (Fig. 5C). Presence of BRCA1 foci<br />

in all cells irradiated after carbon irradiation indicates that BRCA1<br />

might be the important player in response to complex DNA damage<br />

induced by high LET radiation.<br />

3.5. Activation of downstream effectors, Chk1 and Chk2<br />

Activation of ATM, ATR and BRCA1 after DNA damage leads to<br />

the activation of further downstream components including Chk1<br />

and Chk2. After activation in the nuclei, Chk1 and Chk2 move to<br />

cytoplasm. Phospho Chk1, the major target of ATR, was found to<br />

increase in nuclei of carbon-irradiated cells but not in -rays irradiated<br />

cells (Fig. 6A). Marginal activation of Chk2, the preferred<br />

substrate of ATM, was observed in the nucleus in all the cells irrespective<br />

of radiation quality (Fig. 6B).<br />

3.6. Activation of intracellular MAPKs, ERK and JNK<br />

ERK1/2 showed significant activation 1 h after -rays irradiation<br />

and thereafter the increase was persistent till 4 h (Fig. 7A), while

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