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History of infectious disease &<br />

introduction to epidemiology<br />

• Goals and requirements for Bio067<br />

• Germ-theory of disease: A 350 year epic<br />

• Scientific methods<br />

• Epidemiology and public health<br />

• Environmental vs. mechanistic explanations<br />

of disease<br />

Bio 067 course website<br />

Explore, use and contribute!<br />

http://www.bowdoin.edu/faculty/a/amcbride/<br />

courses/bio067<br />

Goals for Biology 067<br />

• Understand the biology behind infectious diseases<br />

– What are infectious agents?<br />

– How do they interact with hosts?<br />

• Learn how scientific research leads to the<br />

identification and understanding of infectious agents<br />

• Explore factors that contribute to the spread of<br />

disease<br />

• Become skilled at asking questions and determining<br />

how they can be addressed<br />

Goals for Biology 067<br />

• Learn to analyze sources of information about<br />

infectious diseases<br />

• Practice working collaboratively with colleagues<br />

• Improve communication skills<br />

Requirements for Biology 067<br />

• Midterm & Final<br />

• Group project<br />

• Laboratory work<br />

• CLASS PARTICIPATION<br />

• Class activities, discussions of readings, asking questions<br />

Germ theory of disease: Timeline<br />

1530 1683 1796 1848 1854 1860s 1876<br />

Fracastoro<br />

Contagion spread<br />

by direct or<br />

indirect contact<br />

Van Leeuwenhoek<br />

“Animacules” in<br />

tooth plaque<br />

Pasteur<br />

Germ theory<br />

of disease<br />

Pictures from Encyclopedia Britannica<br />

http://search.eb.com<br />

1


Scientific Methods<br />

Scientific Methods<br />

Empiricism: Way to gain knowledge primarily<br />

guided by experience and observation<br />

Empiricism<br />

Theory or observation<br />

Review existing information<br />

Define/refine the hypothesis<br />

Hypothetico<br />

Deductive<br />

Reasoning<br />

“Hypothetico-deductive” reasoning:<br />

Hypothesis generation, testing, and refinement<br />

of hypothesis<br />

Design study<br />

Collect and analyze data<br />

Formulate conclusions<br />

Adapted from Gerstman “Epidemiology Kept Simple” (1998), Chapter 1<br />

Adapted from Gerstman “Epidemiology Kept Simple” (1998), Chapter 1<br />

Germ theory of disease: Timeline<br />

1530 1683 1796 1848 1854 1860s 1876<br />

Fracastoro<br />

Contagion spread<br />

by direct or<br />

indirect contact<br />

Van Leeuwenhoek<br />

“Animacules” in<br />

tooth plaque<br />

Jenner<br />

Vaccination to<br />

prevent smallpox<br />

Edward Jenner<br />

1798<br />

"An inquiry into the causes and<br />

effects of the variolae vaccinae, a<br />

disease discovered in some of the<br />

western counties of England,<br />

particularly Gloucestershire, and<br />

known by the name of The Cow Pox"<br />

Pictures from Encyclopedia Britannica<br />

http://search.eb.com<br />

Semmelweiss museum Budapest, Hungary<br />

in Milestones in Microbiology, ed. T. Brock<br />

(1961), (Washington, DC: ASM Press) pp. 121-125.<br />

Jenner's observations<br />

• During smallpox outbreaks, dairy-maids had<br />

lower incidence of smallpox than others.<br />

• When servants milked cows with cowpoxinfected<br />

udders, "inflamed spots" appeared on<br />

their hands.<br />

• When these subjects received smallpox<br />

inoculations, they did not show symptoms.<br />

(Jenner, E., 1798, p. 121)<br />

Hypothesis<br />

People with minor cases of cowpox become resistant to smallpox.<br />

Test<br />

May 14, 1796: Inserted "matter" from an infected dairy-maid's<br />

hand into "superficial incisions" in the arm of William Summers.<br />

May 23, 1796: Summers "was perceptibly indisposed."<br />

July 1, 1796: Inserted "variolous matter" from a smallpox patient<br />

into "slight punctures and incisions" Summers' arms.<br />

Result<br />

"No effect was produced on the constitution" of<br />

Summers following smallpox inoculation.<br />

(Jenner, E., 1798, p. 123)<br />

2


Germ theory of disease: Timeline<br />

Fracastoro<br />

Contagion spread<br />

by direct or<br />

indirect contact<br />

Van Leeuwenhoek<br />

“Animacules” in<br />

tooth plaque<br />

1530 1683 1796 1848 1854 1860s 1876<br />

Jenner<br />

Vaccination with<br />

cowpox protects<br />

from smallpox<br />

Semmelweis<br />

Antiseptic<br />

method<br />

Ignaz Semmelweis<br />

1818-1865<br />

•Assistant, obstetric clinic<br />

Vienna, 1844<br />

•Hospital childbirth mortality<br />

rate 25-30% (puerperal fever)<br />

•Hypothesis: Students carrying<br />

infection to mothers<br />

•Test: Wound transmission<br />

Pictures from Encyclopedia Britannica<br />

http://search.eb.com<br />

http://clendening.kumc.edu/dc/pc/semmelweis01.jpg<br />

Solution for Puerperal Fever<br />

Diseases in populations<br />

Endemic Epidemic Pandemic<br />

within upon all<br />

Handwashing<br />

Demios = the people<br />

Semmelweiss museum Budapest, Hungary<br />

Epidemiology and Public Health<br />

Germ theory of disease: Timeline<br />

Epidemiology: The study of the causes,<br />

transmission, incidence, and prevalence of<br />

disease and health-related events in populations<br />

Public Health: Organized community effort to<br />

prevent disease and promote health<br />

Fracastoro<br />

Contagion spread<br />

by direct or<br />

indirect contact<br />

Van Leeuwenhoek<br />

“Animacules” in<br />

tooth plaque<br />

1530 1683 1796 1848 1854 1860s 1876<br />

Jenner<br />

Vaccination with<br />

cowpox protects<br />

from smallpox<br />

Semmelweis<br />

Antiseptic<br />

method<br />

Snow<br />

Cholera in<br />

drinking<br />

water<br />

From Gerstman “Epidemiology Kept Simple” (1998), p. 3.<br />

Pictures from Encyclopedia Britannica<br />

http://search.eb.com<br />

3


John Snow’s map of the 1854 cholera epidemic<br />

See Fig. 1.2 and Table 1.4 in Gerstman Ch. 1<br />

Environmental vs. mechanistic<br />

views of disease<br />

Environmental/non-mechanistic view:<br />

Diseases are caused by environmental<br />

conditions and can therefore be controlled<br />

by improving the environment<br />

Mechanistic view: Diseases are caused by<br />

specific microbes and can therefore be<br />

controlled by fighting the microbe<br />

http://www.nationalgeographic.com/resources/ngo/education/ideas912/912choleraho3.html<br />

Germ theory of disease: Timeline<br />

Fracastoro<br />

Contagion spread<br />

by direct or<br />

indirect contact<br />

Van Leeuwenhoek<br />

“Animacules” in<br />

tooth plaque<br />

1530 1683 1796 1848 1854 1860s 1876<br />

Jenner<br />

Vaccination with<br />

cowpox protects<br />

from smallpox<br />

Semmelweis<br />

Antiseptic<br />

method<br />

Snow<br />

Cholera in<br />

drinking<br />

water<br />

Pasteur<br />

Germ theory<br />

of disease<br />

Koch<br />

Experimental<br />

procedure to<br />

determine<br />

infectious agent<br />

>20 key<br />

discoveries<br />

2000<br />

Information I will request by email<br />

Name Year Major (potential)<br />

Home town<br />

Science background (Bowdoin & before)<br />

Why are you taking Bio 067?<br />

What do you want to learn this semester?<br />

What question(s) do you have about emerging<br />

infectious diseases?<br />

Pictures from Encyclopedia Britannica<br />

http://search.eb.com<br />

4

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