genomewide characterization of host-pathogen interactions by ...

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Maren Depke References Kwan T, Liu J, DuBow M, Gros P, Pelletier J. The complete genomes and proteomes of 27 Staphylococcus aureus bacteriophages. Proc Natl Acad Sci U S A. 2005 Apr 5;102(14):5174-9. Epub 2005 Mar 23. Lam TK, Gutierrez-Juarez R, Pocai A, Bhanot S, Tso P, Schwartz GJ, Rossetti L. Brain glucose metabolism controls the hepatic secretion of triglyceride-rich lipoproteins. Nat Med. 2007 Feb; 13(2):171-80. Epub 2007 Feb 4. Lambert GW, Straznicky NE, Lambert EA, Dixon JB, Schlaich MP. Sympathetic nervous activation in obesity and the metabolic syndrome – Causes, consequences and therapeutic implications. Pharmacol Ther. 2010 May;126(2):159-72. Epub 2010 Feb 19. Lang CH, Bagby GJ, Spitzer JJ. Carbohydrate dynamics in the hypermetabolic septic rat. Metabolism. 1984 Oct;33(10):959-63. Laye JP, Gill JH. Phospholipase A2 expression in tumours: a target for therapeutic intervention? Drug Discov Today. 2003 Aug1; 8(15):710-6. Le Bail O, Schmidt-Ullrich R, Israël A. Promoter analysis of the gene encoding the IκB-α/MAD3 inhibitor of NF-κB: positive regulation by members of the rel/NF-κB family. EMBO J. 1993 Dec 15;12(13):5043-9. Lecordier L, Vanhollebeke B, Poelvoorde P, Tebabi P, Paturiaux-Hanocq F, Andris F, Lins L, Pays E. C-terminal mutants of apolipoprotein L-I efficiently kill both Trypanosoma brucei brucei and Trypanosoma brucei rhodesiense. PLoS Pathog. 2009 Dec;5(12):e1000685. Epub 2009 Dec 4. Lee LY, Miyamoto YJ, McIntyre BW, Höök M, McCrea KW, McDevitt D, Brown EL. The Staphylococcus aureus Map protein is an immunomodulator that interferes with T cell-mediated responses. J Clin Invest. 2002 Nov;110(10):1461-71. Lee LY, Höök M, Haviland D, Wetsel RA, Yonter EO, Syribeys P, Vernachio J, Brown EL. Inhibition of complement activation by a secreted Staphylococcus aureus protein. J Infect Dis. 2004 Aug 1; 190(3):571-9. Epub 2004 Jul 6. Lee LY, Liang X, Höök M, Brown EL. Identification and characterization of the C3 binding domain of the Staphylococcus aureus extracellular fibrinogenbinding protein (Efb). J Biol Chem. 2004 Dec 3;279(49):50710-6. Epub 2004 Aug 26. Leibowitz SF, Wortley KE. Hypothalamic control of energy balance: different peptides, different functions. Peptides. 2004 Mar;25(3):473-504. Leon LR. Invited review: cytokine regulation of fever: studies using gene knockout mice. J Appl Physiol. 2002 Jun;92(6):2648- 55. Leonard BE. HPA and immune axes in stress: involvement of the serotonergic system. Neuroimmunomodulation. 2006;13(5-6): 268-76. Epub 2007 Aug 6. Levels JH, Lemaire LC, van den Ende AE, van Deventer SJ, van Lanschot JJ. Lipid composition and lipopolysaccharide binding capacity of lipoproteins in plasma and lymph of patients with systemic inflammatory response syndrome and multiple organ failure. Crit Care Med. 2003 Jun;31(6):1647-53. Li G, Zhang J, Sun Y, Wang H, Wang Y. The evolutionarily dynamic IFN-inducible GTPase proteins play conserved immune functions in vertebrates and cephalochordates. Mol Biol Evol. 2009 Jul;26(7):1619-30. Epub 2009 Apr 15. Liang X, Yu C, Sun J, Liu H, Landwehr C, Holmes D, Ji Y. Inactivation of a two-component signal transduction system, SaeRS, eliminates adherence and attenuates virulence of Staphylococcus aureus. Infect Immun. 2006 Aug;74(8):4655-65. Liao F, Rabin RL, Yannelli JR, Koniaris LG, Vanguri P, Farber JM. Human Mig chemokine: biochemical and functional characterization. J Exp Med. 1995 Nov 1;182(5):1301-14. Li-Hawkins J, Lund EG, Bronson AD, Russell DW. Expression cloning of an oxysterol 7α-hydroxylase selective for 24-hydroxycholesterol. J Biol Chem. 2000 Jun 2; 275(22):16543-9. 220

Maren Depke References Limmer A, Ohl J, Kurts C, Ljunggren HG, Reiss Y, Groettrup M, Momburg F, Arnold B, Knolle PA. Efficient presentation of exogenous antigen by liver endothelial cells to CD8+ T cells results in antigen-specific T-cell tolerance. Nat Med. 2000 Dec;6(12):1348-54. Lin CH, Sheu SY, Lee HM, Ho YS, Lee WS, Ko WC, Sheu JR. Involvement of protein kinase C-γ in IL-1β-induced cyclooxygenase-2 expression in human pulmonary epithelial cells. Mol Pharmacol. 2000 Jan;57(1):36-43. Lin CH, Kuan IH, Lee HM, Lee WS, Sheu JR, Ho YS, Wang CH, Kuo HP. Induction of cyclooxygenase-2 protein by lipoteichoic acid from Staphylococcus aureus in human pulmonary epithelial cells: involvement of a nuclear factor-κB-dependent pathway. Br J Pharmacol. 2001 Oct;134(3):543-52. Lindsay JA, Holden MT. Staphylococcus aureus: superbug, super genome? Trends Microbiol. 2004 Aug;12(8):378-85. Lindsay JA, Ruzin A, Ross HF, Kurepina N, Novick RP. The gene for toxic shock toxin is carried by a family of mobile pathogenicity islands in Staphylococcus aureus. Mol Microbiol. 1998 Jul;29(2):527-43. Linge HM, Collin M, Giwercman A, Malm J, Bjartell A, Egesten A. The antibacterial chemokine MIG/CXCL9 is constitutively expressed in epithelial cells of the male urogenital tract and is present in seminal plasma. J Interferon Cytokine Res. 2008 Mar;28(3):191-6. Liptay S, Schmid RM, Nabel EG, Nabel GJ. Transcriptional regulation of NF-κB2: evidence for κB-mediated positive and negative autoregulation. Mol Cell Biol. 1994 Dec;14(12):7695-703. Liu GY, Essex A, Buchanan JT, Datta V, Hoffman HM, Bastian JF, Fierer J, Nizet V. Staphylococcus aureus golden pigment impairs neutrophil killing and promotes virulence through its antioxidant activity. J Exp Med. 2005 Jul 18;202(2):209-15. Epub 2005 Jul 11. Liu J, Shue E, Ewalt KL, Schimmel P. A new gamma-interferon-inducible promoter and splice variants of an anti-angiogenic human tRNA synthetase. Nucleic Acids Res. 2004 Feb 2;32(2):719-27. Print 2004. Liu Z, Lu H, Jiang Z, Pastuszyn A, Hu CA. Apolipoprotein l6, a novel proapoptotic Bcl-2 homology 3-only protein, induces mitochondria-mediated apoptosis in cancer cells. Mol Cancer Res. 2005 Jan;3(1):21-31. Livermore DM. Antibiotic resistance in staphylococci. Int J Antimicrob Agents. 2000 Nov;16 Suppl 1:S3-10. Livermore DM. Has the era of untreatable infections arrived? J Antimicrob Chemother. 2009 Sep;64 Suppl 1:i29-36. Loetscher M, Gerber B, Loetscher P, Jones SA, Piali L, Clark-Lewis I, Baggiolini M, Moser B. Chemokine receptor specific for IP10 and Mig: structure, function, and expression in activated T-lymphocytes. J Exp Med. 1996 Sep 1;184(3):963-9. Loetscher P, Pellegrino A, Gong JH, Mattioli I, Loetscher M, Bardi G, Baggiolini M, Clark-Lewis I. The ligands of CXC chemokine receptor 3, I-TAC, Mig, and IP10, are natural antagonists for CCR3. J Biol Chem. 2001 Feb 2;276(5):2986-91. Epub 2000 Nov 10. Lorenz U, Hüttinger C, Schäfer T, Ziebuhr W, Thiede A, Hacker J, Engelmann S, Hecker M, Ohlsen K. The alternative sigma factor sigma B of Staphylococcus aureus modulates virulence in experimental central venous catheter-related infections. Microbes Infect. 2008 Mar;10(3):217-23. Epub 2007 Nov 28. Loukissa A, Cardozo C, Altschuller-Felberg C, Nelson JE. Control of LMP7 expression in human endothelial cells by cytokines regulating cellular and humoral immunity. Cytokine. 2000 Sep;12(9):1326-30. Lowy FD. Staphylococcus aureus infections. N Engl J Med. 1998 Aug 20;339(8):520-32. Lowy FD. Is Staphylococcus aureus an intracellular pathogen? Trends Microbiol. 2000 Aug;8(8):341-3. Lundberg U. Stress hormones in health and illness: the roles of work and gender. Psychoneuroendocrinology. 2005 Nov; 30(10):1017-21. 221

Maren Depke<br />

References<br />

Kwan T, Liu J, DuBow M, Gros P, Pelletier J.<br />

The complete genomes and proteomes <strong>of</strong> 27 Staphylococcus aureus bacteriophages. Proc Natl Acad Sci U S A. 2005<br />

Apr 5;102(14):5174-9. Epub 2005 Mar 23.<br />

Lam TK, Gutierrez-Juarez R, Pocai A, Bhanot S, Tso P, Schwartz GJ, Rossetti L.<br />

Brain glucose metabolism controls the hepatic secretion <strong>of</strong> triglyceride-rich lipoproteins. Nat Med. 2007 Feb;<br />

13(2):171-80. Epub 2007 Feb 4.<br />

Lambert GW, Straznicky NE, Lambert EA, Dixon JB, Schlaich MP.<br />

Sympathetic nervous activation in obesity and the metabolic syndrome – Causes, consequences and therapeutic<br />

implications. Pharmacol Ther. 2010 May;126(2):159-72. Epub 2010 Feb 19.<br />

Lang CH, Bag<strong>by</strong> GJ, Spitzer JJ.<br />

Carbohydrate dynamics in the hypermetabolic septic rat. Metabolism. 1984 Oct;33(10):959-63.<br />

Laye JP, Gill JH.<br />

Phospholipase A2 expression in tumours: a target for therapeutic intervention? Drug Discov Today. 2003 Aug1;<br />

8(15):710-6.<br />

Le Bail O, Schmidt-Ullrich R, Israël A.<br />

Promoter analysis <strong>of</strong> the gene encoding the IκB-α/MAD3 inhibitor <strong>of</strong> NF-κB: positive regulation <strong>by</strong> members <strong>of</strong> the<br />

rel/NF-κB family. EMBO J. 1993 Dec 15;12(13):5043-9.<br />

Lecordier L, Vanhollebeke B, Poelvoorde P, Tebabi P, Paturiaux-Hanocq F, Andris F, Lins L, Pays E.<br />

C-terminal mutants <strong>of</strong> apolipoprotein L-I efficiently kill both Trypanosoma brucei brucei and Trypanosoma brucei<br />

rhodesiense. PLoS Pathog. 2009 Dec;5(12):e1000685. Epub 2009 Dec 4.<br />

Lee LY, Miyamoto YJ, McIntyre BW, Höök M, McCrea KW, McDevitt D, Brown EL.<br />

The Staphylococcus aureus Map protein is an immunomodulator that interferes with T cell-mediated responses.<br />

J Clin Invest. 2002 Nov;110(10):1461-71.<br />

Lee LY, Höök M, Haviland D, Wetsel RA, Yonter EO, Syribeys P, Vernachio J, Brown EL.<br />

Inhibition <strong>of</strong> complement activation <strong>by</strong> a secreted Staphylococcus aureus protein. J Infect Dis. 2004 Aug 1;<br />

190(3):571-9. Epub 2004 Jul 6.<br />

Lee LY, Liang X, Höök M, Brown EL.<br />

Identification and <strong>characterization</strong> <strong>of</strong> the C3 binding domain <strong>of</strong> the Staphylococcus aureus extracellular fibrinogenbinding<br />

protein (Efb). J Biol Chem. 2004 Dec 3;279(49):50710-6. Epub 2004 Aug 26.<br />

Leibowitz SF, Wortley KE.<br />

Hypothalamic control <strong>of</strong> energy balance: different peptides, different functions. Peptides. 2004 Mar;25(3):473-504.<br />

Leon LR.<br />

Invited review: cytokine regulation <strong>of</strong> fever: studies using gene knockout mice. J Appl Physiol. 2002 Jun;92(6):2648-<br />

55.<br />

Leonard BE.<br />

HPA and immune axes in stress: involvement <strong>of</strong> the serotonergic system. Neuroimmunomodulation. 2006;13(5-6):<br />

268-76. Epub 2007 Aug 6.<br />

Levels JH, Lemaire LC, van den Ende AE, van Deventer SJ, van Lanschot JJ.<br />

Lipid composition and lipopolysaccharide binding capacity <strong>of</strong> lipoproteins in plasma and lymph <strong>of</strong> patients with<br />

systemic inflammatory response syndrome and multiple organ failure. Crit Care Med. 2003 Jun;31(6):1647-53.<br />

Li G, Zhang J, Sun Y, Wang H, Wang Y.<br />

The evolutionarily dynamic IFN-inducible GTPase proteins play conserved immune functions in vertebrates and<br />

cephalochordates. Mol Biol Evol. 2009 Jul;26(7):1619-30. Epub 2009 Apr 15.<br />

Liang X, Yu C, Sun J, Liu H, Landwehr C, Holmes D, Ji Y.<br />

Inactivation <strong>of</strong> a two-component signal transduction system, SaeRS, eliminates adherence and attenuates virulence<br />

<strong>of</strong> Staphylococcus aureus. Infect Immun. 2006 Aug;74(8):4655-65.<br />

Liao F, Rabin RL, Yannelli JR, Koniaris LG, Vanguri P, Farber JM.<br />

Human Mig chemokine: biochemical and functional <strong>characterization</strong>. J Exp Med. 1995 Nov 1;182(5):1301-14.<br />

Li-Hawkins J, Lund EG, Bronson AD, Russell DW.<br />

Expression cloning <strong>of</strong> an oxysterol 7α-hydroxylase selective for 24-hydroxycholesterol. J Biol Chem. 2000 Jun 2;<br />

275(22):16543-9.<br />

220

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