AEBAR <strong>2012</strong>: Appendices Savage, C., 2009. Development of bioindicators for the assimilation of terrestrial nutrient inputs in coastal ecosystems as a tool for watershed management, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 30, 35 p. Savage, C., Thrush, S., Lohrer, A., Hewitt, J., <strong>2012</strong>. Ecosystem Services Transcend Boundaries: Estuaries Provide Resource Subsidies <strong>and</strong> Influence Functional Diversity in Coastal Benthic Communities. PLoS ONE 7 (8 ): e42708. doi:42710.41371/journal.pone.0042708. Schiaparelli, S., Alvaro, M., Bohn, J., Albertelli, G., 2010 'Hitchhiker' polynoid polychaetes in cold deep waters <strong>and</strong> their potential influence on benthic soft bottom food webs. Antarctic Science 22: 399-407. Schiaparelli, S., Lörz, A., Cattaneo-Vietti, R., 2006. Diversity <strong>and</strong> distribution of mollusc assemblages on the Victoria L<strong>and</strong> coast <strong>and</strong> the Balleny Isl<strong>and</strong>s, Ross Sea, Antarctica. Antarctic Science 18 (4): 615-631. Schiaparelli, S., Olivero, M., Taviani, M., Griffiths, H., Lörz, A., Albertelli, G., 2008. Circumpolar distribution of the pycnogonidectoparasitic gastropod Dickdellia labioflecta (Dell, 1990) (Mollusca: Zerotulidae). Antarctic Science 20: 497-498. Schwarz, A., Taylor, R., Hewitt, J., Phillips, N., Shima, J., Cole, R., Budd, R., 2006. Impacts of terrestrial runoff on the biodiversity of rocky reefs, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 7, 109 p. Schwarz, A.-M., Hawes, I., Andrew, N., Mercer, S., Cummings, V., Thrush, S., 2005. Primary production potential of nongeniculate coralline algae at Cape Evans, Ross Sea, Antarctica. Marine Ecology Progress Series 294: 131-140. Schwarz, A.-M., Hawes, I., Andrew, N., Norkko, A., Cummings, V., Thrush, S., 2003. Macroalgal photosynthesis near the southern global limit for growth; Cape Evans, Ross Sea, Antarctica. Polar Biology 26: 789-799. Sewell, M.A., 2005. Examination of the meroplankton community in the southwestern Ross Sea, Antarctica, using a collapsible plankton net. Polar Biology. 28:119–131. Sewell, M.A., 2006. The meroplankton community of the northern Ross Sea: a preliminary comparison with the McMurdo Sound region. Antarctic. Science. 18:595–602. Sewell, M., Lavery, S., Baker, C., 2006 Whose larva is that? Molecular identification of larvae of the Ross Sea, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 3, 57 p. Sharp, B., Parker, S., Pinkerton, M., (lead authors), also Breen, B., Cummings, V., Dunn, A., Grant, S., Hanchet, S., Keys, H., Lockhart, S., Lyver, P.B., O’Driscoll, R., Williams, M., Wilson, P., 2010. Bioregionalisation <strong>and</strong> Spatial Ecosystem Processes in the Ross Sea Region, CCAMLR document WG-EMM-10/30, Hobart, Australiap. Sharp, B., Parker, S., Smith, N., 2009. An Impact Assessment Framework for Bottom Fishing Methods in the CCAMLR Convention Area. CCAMLR Science 16: 195-210. Sharp, B., Waugh, S., Walker, N., 2011. A risk assessment framework for incidental seabird mortality associated with New Zeal<strong>and</strong> fishing in the New Zeal<strong>and</strong> EEZ., Unpublished report held by the Ministry of Fisheries, Wellington., 39 p. Slooten, E., Dawson, S., Rayment, W., Childerhouse, S., 2005. Distribution of Maui's dolphin, Cephalorynchus hectori maui, New Zeal<strong>and</strong> Fisheries Assessment Report. 2005/28, 21 p. Smith, A., Gordon, D., 2011. Bryozoans of southern New Zeal<strong>and</strong>: a field identification guide, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report. No. 75, 65 p. Smith, F., 2006. Balleny Isl<strong>and</strong>s Ecology Research Voyage Report, R.V. Tiama, Unpublished report held at Ministry of Fisheries for project ZBD2005/01p. Smith, I., 2011. Estimating the magnitude of pre-European Maori marine harvest in two New Zeal<strong>and</strong> study areas, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report, No. 82, 72 p. Smith, M., Baird, S., 2005a. Factors that may influence the level of incidental mortality of New Zeal<strong>and</strong> sea lions (Phocarctos hookeri) in the squid (Nototodarus spp.) trawl fishery in SQU 6T, New Zeal<strong>and</strong> Fisheries Assessment Report 2005/20, 35 p. Smith, M., Baird, S., 2005b. Representativeness of past observer coverage, <strong>and</strong> future coverage required for estimation of New Zeal<strong>and</strong> sea lion (Phocarctos hookeri)captures in the SQU 6T fishery., New Zeal<strong>and</strong> Fisheries Assessment Report 39 p. Smith, M., Baird, S., 2007a. Estimation of incidental captures of New Zeal<strong>and</strong> sea lions (Phocarctos hookeri) in New Zeal<strong>and</strong> fisheries in 2003-04, with particular reference to the SQU 6T squid trawl fishery, New Zeal<strong>and</strong> Fisheries Assessment Report 2007/7, 32 p. Smith, M., Baird, S., 2007b. Estimation of incidental captures of New Zeal<strong>and</strong> sea lions (Phocarctos hookeri) in New Zeal<strong>and</strong> fisheries in 2004-05, with particular reference to the SQU 6T squid trawl fishery., New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 12, 31 p. Smith, M., Baird, S., 2008a. Observer coverage required for the prediction of incidental capture of New Zeal<strong>and</strong> fur seals in New Zeal<strong>and</strong> commercial fisheries, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report. No. 26, 76 p. Smith, M., Baird, S., 2008b. Observer coverage required for the prediction of incidental capture of seabirds in New Zeal<strong>and</strong> commercial fisheries, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 25, 107 p. Smith, M., Baird, S., 2009. Model-based estimation of New Zeal<strong>and</strong> fur seal (Arctocephalus forsteri) incidental captures <strong>and</strong> strike rates for trawl fishing in New Zeal<strong>and</strong> waters for the years 1994-95 to 2005-06, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 40, 90 p. Smith, M., Baird, S., 2011. Predicted incidental captures of New Zeal<strong>and</strong> sea lions (Phocarctos hookeri) in the Auckl<strong>and</strong> Isl<strong>and</strong>s SQU 6T squid trawl fishery for 1995 to 2006., New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report. No. 71, 40 p. Smith, P., Notman, P., 2005. Inventory of biological samples collected from Antarctic toothfish Dissostichus mawsoni over summer 2005, Unpublished Final Research Report for Ministry of Fisheries Project ANT200401, Objective 5p. Smith, P., Roberts, C., Stewart, A., McVeagh, M., Struthers, C., 2007. Identification <strong>and</strong> speciation of Antarctic skates, Unpublished Final Research Report to the Ministry of Fisheries ANT2005/02, objective 5, 27 p. Smith, P., Steinke, D., McMillan, P., McVeagh, S., Struthers, C., 2008. DNA database for commercial marine fish, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 22, 62 p. Smith, P., Steinke, D., McMillan, P., Stewart, A., McVeagh, S., Diaz De Astarloa, J., Welsford, D., Ward, R., 2011a. DNA barcoding highlights a cryptic species of grenadier (genus Macrourus) in the Southern Ocean Journal of Fish Biology 78 (1): 355-365. Smith, P., Steinke, D., McMillan, P., Stewart, A., Ward, R., 2011b. DNA barcoding of morids (Actinopterygii, Moridae) reveals deep divergence in the anti tropical Halargyreus johnsoni but little distinction between Antimora rostrata <strong>and</strong> A. microlepis Mitochondrial DNA (doi:10.3109/19401736.2010.532329). Snelder, T.H., Leathwick, J.R., Dey, K.L., Rowden, A.A., Weatherhead, M.A., Fenwick, G.D., Francis, M.P., Gorman, R.M., Grieve, J.M., Hadfield, M.G., Hewitt, J.E., Richardson, K.M., Uddstrom, M.J., Zeldis, J.R., 2005. The New Zeal<strong>and</strong> Marine <strong>Environment</strong>al Classification, Unpublished Report for the Ministry for the <strong>Environment</strong>, 80 p. 385
AEBAR <strong>2012</strong>: Appendices Snelder, T., Leathwick, J., Dey, K., Rowden, A., Weatherhead, M., 2006. Development of an ecological marine classification in the New Zeal<strong>and</strong> region. <strong>Environment</strong>al Management 39: 12-29. Speed, S., 2005. <strong>Review</strong> of the effects of aquaculture <strong>and</strong> enhancement stock sources on wild fisheries resources <strong>and</strong> the marine environment- report on Objective 1 & 2, Unpublished Final Research Report for the Ministry of Fisheries, 128 p. Speed, S., McLary, D., Jones, E., 2006 The implications of marine reserves for fisheries resources <strong>and</strong> management in the New Zeal<strong>and</strong> context, Unpublished Final Research Report for the Ministry of fisheries, 72 p. Stein, D., <strong>2012</strong>. Snailfishes (Family Liparidae) of the Ross Sea, Antarctica, <strong>and</strong> closely adjacent waters. Zootaxa 3285 ( ISBN 978-1-86977-870-5 (Online edition)): 120. Stevens, D., 2006. Stomach contents of sub-adult Antarctic toothfish (Dissostichus mawsoni) from the western Ross Sea, Antarctica, Unpublished Final Research Report to Ministry of Fisheries, New Zeal<strong>and</strong> for project ANT2004-01, Objective 4., xx p. Stevens, D., Dunn, M., 2010. Different food preferences in four sympatric deep-sea Macrourid fishes. Marine Biology DOI 10.1007/s00227-010-1542-1. Stevens, D., Hurst, R., Bagley, N., 2011. Feeding habits of New Zeal<strong>and</strong> fishes: a literature review <strong>and</strong> summary of research trawl database records 1960 to 2000, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report, No. 85, 218 p. Stevens, D., Smith, M., Grimes, P., Devine, J., Sutton, C., MacGibbon, D., Maolagain, C., 2010. Age, growth, <strong>and</strong> maturity of four New Zeal<strong>and</strong> rattail species, <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> Biodoversity Report. No. 59, 39 p. Strugnell, J., Watts, P., Smith, P., Allcock, A., Submitted. Persistent genetic signatures of historic climatic events in an Antarctic octopus.p. Sutherl<strong>and</strong>, D., 2008. Surface-associated diatoms from marine habitats at Cape Evans, Antarctica, including the first record of living Eunotogramma marginopunctatum. Polar Biology DOI 10.1007/s00300-008-0426-z. Sutton, C., Manning, M., Stevens, D., Marriott, P., 2006. Biological parameters for icefish (Chionobathyscus dewitti) in the Ross Sea, Antarctica, Unpublished Final Research Report to the Ministry of Fisheries. Project ANT2005/02, objective 5, 27 p. Taylor, P., 1992. Incidental catch of non-fish species by setnets in New Zeal<strong>and</strong> waters, New Zeal<strong>and</strong> Fisheries Assessment Research Document 92/21, 23 p. Thatje, S., Lörz, A., 2005. First record of lithodid crabs from Antarctic waters off the Balleny Isl<strong>and</strong>s. Polar Biology 28 (4): 334- 337. Thompson, F., Abraham, E., 2009a. Six monthly summary of the capture of protected species in New Zeal<strong>and</strong> commercial fisheries, summer 2007-08, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report. No. 35, 22 p. Thompson, F., Abraham, E., 2009b. Dolphin bycatch in New Zeal<strong>and</strong> trawl fisheries, 1995-96 to 2006-07, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 36, 24 p. Thompson, F., Abraham, E., 2009c. Estimation of the capture of New Zeal<strong>and</strong> sea lions (Phocarctos hookeri) in trawl fisheries from 1995-96 to 2006-07, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 41, 31 p. Thompson, F., Abraham, E., 2010. Estimation of fur seal (Arctocephalus forsteri) bycatch in New Zeal<strong>and</strong> trawl fisheries, 2002- 03 to 2008-09, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 61, 37 p. Thompson, F., Abraham, E., 2011. Estimation of the capture of New Zeal<strong>and</strong> sea lions (Phocarctos hookeri) in trawl fisheries, from 1995-96 to 2008-09, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 66, 25 p. Thompson, F., Abraham, E., Berkenbusch, K., 2010a. Common dolphin (Delphinus delphis) bycatch in New Zeal<strong>and</strong> mackerel trawl fisheries, 1995–96 to 2008–09, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 63, 20 p. Thompson, F., Abraham, E., Berkenbusch, K., 2011. Marine mammal bycatch in New Zeal<strong>and</strong> trawl fisheries, 1995-96 to 2009- 10, Draft Final Research Report for Ministry of Fisheries project PRO2010-01 (Unpublished report held by the Ministry of Fisheries, Wellington), 80 p. Thompson, F., Abraham, E., Oliver, MD, 2010b. Estimation of fur seal bycatch in New Zeal<strong>and</strong> trawl fisheries, 2002-03 to 2007- 08, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report. No. 56, 29 p. Thompson, F., Oliver, M., Abraham, E., 2010c. Estimation of the capture of New Zeal<strong>and</strong> sea lions (Phocarctos hookeri) in trawl fisheries, from 1995-96 to 2007-08, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 52, 25 p. Thrush, S., Cummings, V., 2011. Massive icebergs, alteration in primary food resources <strong>and</strong> change in benthic communities at Cape Evans, Antarctica. Marine Ecology. Thrush, S., Dayton, P., Cattaneo-Vietti, R., Chiantore, M., Cummings, V., Andrew, N., Hawes, I., Kim, S., Kvitek, R., Schwarz, A.-M., 2006. Broad-scale factors influencing the biodiversity of coastal benthic communities of the Ross Sea, Deep Sea Research II. 53, 959-971 p. Thrush, S., Hewitt, J., Cummings, V., Norkko, A., Chiantore, M., 2010. β-diversity <strong>and</strong> species accumulation in Antarctic coastal benthic communities: the role of habitat, distance <strong>and</strong> productivity on ecological connectivity. , PLoSONE http://dx.plos.org/10.1371/journal.pone.0011899p. Thrush, S., Lohrer, D., Savage, C., In Press. Carbonate sediments: the positive <strong>and</strong> negative effects of l<strong>and</strong>-coast interactions of functional diversity, <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report, xx p. Tracey, D., Anderson, O., Clark, M., Oliver, M., (Comps.), 2005. A guide to common deepsea invertebrates in New Zeal<strong>and</strong> waters, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 1, 160 p. Tracey, D., Anderson, O., Naylor, J.C., 2011a. A guide to common deepsea invertebrates in New Zeal<strong>and</strong> waters, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 86, 317 p. Tracey, D., Rowden, A., Mackay, K., Compton, T., 2011b. Habitat-forming cold-water corals show affinity for seamounts in the New Zeal<strong>and</strong> region. . Marine Ecology Progress Series 430: 1-22. Tracey, D., Anderson, O., Naylor, J.R., (Comps.), 2007. A guide to common deepsea invertebrates in New Zeal<strong>and</strong> waters, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No.10., 282 p. Tracey, D., Carter, M., Parker, S., 2010. Evaluation of VME taxa monitoring by scientific observers, Unpublished Final Research Report for Ministry of Fisheries Research Project ANT2009/01 Objective 8, 17 p. Tracey, D., Parker, S., Mackay, E., Anderson, O., Ramm, K., 2008. Classification guide for potentially vulnerable invertebrate taxa in the SPRFMO Area, Idenitifcation guide for Ministry of fisheries 1p. Tuck, I., Cole, R., Devine, J., 2009. Ecosystem indicators for New Zeal<strong>and</strong> fisheries, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 42, 188 p. Tuck, I., Drury, J., Kelly, M., Gerring, P., 2010. Designing a programme to monitor the recovery of the benthic community between North Cape <strong>and</strong> Cape Reinga, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 53, 78 p. Tuck, I., Hewitt, J., In Press. Monitoring change in benthic communities in Spirits bay, <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report, xx p. 386
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PROTECTED SPECIES AEBAR 2012: Appen
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PROTECTED SPECIES continued Project
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