AEBAR <strong>2012</strong>: Appendices Leathwick JR, Rowden A, Nodder S, Gorman R, Bardsley S, Pinkerton M, Baird SJ, Hadfield M, Currie K, Goh A 2010. Development of a benthic-optimised marine environment classification for waters within the New Zeal<strong>and</strong> EEZ. Final Research Report for Ministry of Fisheries Research Project BEN200601, Objective 5. Leduc, D., Rowden, A., Bowden, D., Probert, P., Pilditch, C., <strong>2012</strong>a. Direct evidence for a unimodal relationship between productivity <strong>and</strong> deep-sea benthic diversity. Marine Ecology Progress Series 454: 53-64. Leduc, D., Rowden, A., Bowden, D., Probert, P., Pilditch, C., Nodder, S., <strong>2012</strong>b. Unimodal relationship between biomass <strong>and</strong> species richness of deep-sea nematodes: implications for the link between productivity <strong>and</strong> diversity. Marine Ecology Progress Series 454: 53-64. Linse, K., Cope, T., Lörz, A., S<strong>and</strong>s, C., 2007. Is the Scotia Sea a centre of Antarctic marine diversification? Some evidence of cryptic speciation in the circum-Antarctic bivalve Lissarca notorcadensis (Arcoidea : Philobryidae). Polar Biology 30: 1059-1068. Livingston, M., 2004. A sampling programme to construct <strong>and</strong> quantify food-webs in two key areas supporting important fish <strong>and</strong> invertebrate species in New Zeal<strong>and</strong>, Unpublished Final Research Report for Ministry of Fisheries Project ENV2002-07, Objective 1 NIWA, xx p. Livingston, M., 2009. Towards a National Marine <strong>Environment</strong> Monitoring Programme in New Zeal<strong>and</strong>: A discussion paper submitted to the <strong>Biodiversity</strong> Research Advisory Group Workshop on Marine <strong>Environment</strong>al Monitoring, Unpublished report held at MPI, Wellington, xx p. Livingston, M., Clark, M., Baird, S., 2003. Trends in incidental catch of major fisheries on the Chatham Rise for Orfishing years 1989-90 to 1998-99., New Zeal<strong>and</strong> Fisheries Assessment Report 2003/52, 74 p. Lohrer, A., Chiaroni, L., Thrush, S.F., Hewitt, J., 2010. Isolated <strong>and</strong> interactive effects of two key species on ecosystem function <strong>and</strong> trophic linkages in New Zeal<strong>and</strong> soft-sediment habitats, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 44, 69 p. Lohrer, A., Cummings, V., Thrush, S., <strong>2012</strong>. Altered sea ice thickness <strong>and</strong> permanence affects benthic ecosystem functioning in coastal Antarctica. Ecosystems 10.1007/s10021-10012-19610-10027. Lorrey, A., Goff, J., McFadgen, B., Chagué-Goff, C., Neil, H., MacDiarmid, A., In Press. A synthesis of climatic <strong>and</strong> geophysical driver activity in New Zeal<strong>and</strong> <strong>and</strong> environmental changes during the last 1000 years, New Zeal<strong>and</strong> <strong>Aquatic</strong> Enviornment <strong>and</strong> <strong>Biodiversity</strong> Report, xx p. Lörz, A., 2009. Synopsis of Amphipoda from two recent Ross Sea voyages with description of a new species of Epimeria (Epimeriidae, Amphipoda, Crustacea). Zootaxa 2167: 59-68. Lörz, A., 2010a. Deep-sea Rhachotropis (Crustacea: Amphipoda: Eusiridae) from New Zeal<strong>and</strong> <strong>and</strong> the Ross Sea with key to the Pacific, Indian Ocean <strong>and</strong> Antarctic species. Zootaxa 2482: 22-48. Lörz, A., 2010b. New Zeal<strong>and</strong> Amphipoda, Conference presentation, XIVth International Colloquium on Amphipoda, Seville, Spain p. Lörz, A.-N., 2010c. Deep-sea Rhachotropis (Crustacea: Amphipoda: Eusiridae) from New Zeal<strong>and</strong> <strong>and</strong> the Ross Sea with key to the Pacific, Indian Ocean <strong>and</strong> Antarctic species. Zootaxa 2482 22-48. Lörz, A., 2011a. <strong>Biodiversity</strong> of unknown New Zeal<strong>and</strong> habitat: bathyal invertebrate assemblages in the benthic boundary layer. Marine <strong>Biodiversity</strong> 41 (2): 287-297. Lörz, A., 2011b. Pacific Epimeriidae (Amphipoda, Crustacea): Epimeria. Journal of the Marine Biological Association of the United Kingdom 91 (2): 471-477. Lörz, A., Maas, E., Linse, K., Coleman, C., 2009 Do circum-Antarctic species exist in peracarid Amphipoda? A case study in the genus Epimeria Costa, 1851 (Crustacea, Peracarida, Epimeriidae). In: Bruce N (Ed) Advances in the taxonomy <strong>and</strong> biogeography of Crustacea in the Southern Hemisphere. ZooKeys 18: 91-128. Lörz, A., Maas, E., Linse, K., Fenwick, G., 2007. Epimeria schiaparelli sp. nov., an amphipod crustacean (family Epimeriidae) from the Ross Sea, Antarctica, with molecular characterisation of the species complex. Zootaxa 1402: 23-37. Lörz, A., Smith, P., Linse, K., Steinke, D., <strong>2012</strong>a. First Molecular Evidence for Underestimated <strong>Biodiversity</strong> of Rhachotropis (Crustacea, Amphipoda), with Description of a New Species. . PLoS ONE 7 (3): e32365. doi:32310.31371/journal.pone.0032365. Lörz, A.-N., Berkenbusch, K., Nodder, S., Ahyong, S., Bowden, D., McMillan, P., Gordon, D., Mills, L., Mackay, K., <strong>2012</strong>b. A review of deep-sea biodiversity associated with trench, canyon <strong>and</strong> abyssal habitats deeper than 1500 m in New Zeal<strong>and</strong> waters New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report, No. 92, 133 p. Lörz, A., Smith, P., Linse, K., Steinke, D., In Prep. Molecular insights to deep-sea Rhachotropis from New Zeal<strong>and</strong> <strong>and</strong> the Ross Sea with description of a new species. Lörz, A., Smith, P., Linse, K., Steinke, D., In press. High genetic diversity within Epimeria georgiana (Amphipoda) from the southern Scotia Arc. Marine <strong>Biodiversity</strong>. Lörz, A.-N., Coleman, O., 2009. Living jems: jewel-like creatures from the deep. Water <strong>and</strong> Atmosphere 17 (1): 16-17. Lundquist, C., Thrush, S., Coco, G., Hewitt, J., 2010. Interactions between distributions <strong>and</strong> dispersal decrease persistence thresholds of a marine benthic community. Marine Ecology Progress Series 413: 217-228. Lyle, J., 2011. SRP2010-03: Fur seal interactions with SED excluder device, Unpublished Final Research Report for Ministry ofFisheries, 26 July 2011, 20 p. Maas, E., Voyles, K., Pickmere, S., Hall, J., Bowden, D., Clark, M., 2010a. Bacterial <strong>and</strong> Archaeal diversity <strong>and</strong> exo-enzyme activity in Ross Sea, Antarctica sediments. , Poster presented at SAME 11- Symposium on <strong>Aquatic</strong> Microbial Ecology, Piran, Slovenia, 30th August - 4th September 2010.p. Maas, E., Law, C., Hall, J., Chang, H., Bury, S., Robinson, K., Thompson, K., Voyles, M., 2010b. Impacts of ocean acidification on planktonic ecosystems of the southern ocean, Unpublished Final Research Report for Ministry of Fisheries Project ZBD2008-22, held by the Ministry of Fisheries, 44 p. MacDiarmid, A., Cleaver, P., Stirling, B., In Press a. Historical evidence for the state <strong>and</strong> exploitation of the marine environment in the Hauraki Gulf <strong>and</strong> along the Otago-Catlins shelf 1769 - 1950, New Zeal<strong>and</strong> <strong>Aquatic</strong> Enviornment <strong>and</strong> <strong>Biodiversity</strong> Report xx p. MacDiarmid, A., Smith, I., Paul, L., Francis, M., McKenzie, A., Parsons, D., Hartill, B., Stirling, B., Cleaver, P., In Press b. A complete history of the exploitation of an ecologically important inshore finfish species in the Hauraki Gulf, New Zeal<strong>and</strong>: a synthesis of archaeological, historical <strong>and</strong> fisheries data, New Zeal<strong>and</strong> <strong>Aquatic</strong> Enviornment <strong>and</strong> <strong>Biodiversity</strong> Report <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report xx p. MacDiarmid, A., Beaumont, J., MacDiarmid, A., Morrison, M., McKenzie, A., Abraham, E., Taylor, R., Gill<strong>and</strong>ers, B., Bury, S., Cowles, A., Parsons, D., Cole, R., Pinkerton, M., Walker, J., In Press c. Rocky reef ecosystems – how do they function, New Zeal<strong>and</strong> <strong>Aquatic</strong> Enviornment <strong>and</strong> <strong>Biodiversity</strong> Report xx p. 381
AEBAR <strong>2012</strong>: Appendices MacDiarmid, A., McKenzie, A., Sturman, J., Beaumont, J., Mikaloff-Fletcher, S., Dunne, J., <strong>2012</strong>. Assessment of anthropogenic threats to New Zeal<strong>and</strong> marine habitats, <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 93, 255 p. MacDiarmid, A., Stewart, R., In Press. Routine <strong>and</strong> opportunistic sampling of Ross Sea <strong>and</strong> Balleny Isl<strong>and</strong>s <strong>Biodiversity</strong>, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report xx p. MacKenzie, D., Fletcher, D., 2006. Characterisation of seabird captures in NZ fisheries, Unpublished Final Research Report prepared for the Ministry of Fisheries, Proteus Wildlife Research Consultants, 99 p. MacKenzie, D., Fletcher, D., 2010. Designing a programme of indicators of population performance with respect to captures of seabirds in New Zeal<strong>and</strong> fisheries, Unpublished Final Research Report for Ministry of fisheries project ENV2005-08, held by the Ministry of Fisheriesp. Marriot, P., Horn, P., McMillan, P., 2003. Species identification <strong>and</strong> age estimation for the ridge-scaled Macrourid (Macrourus whitsoni) the Ross Sea. CCAMLR Science 10: 37-51. Mattlin, R., 1993. Incidental catch of fur seals in the west coast South Isl<strong>and</strong> hoki trawl fishery, 1989-92, New Zeal<strong>and</strong> Fisheries Assessment Report 1993/19p. Mattlin, R., 2004. QMA SQU6T New Zeal<strong>and</strong> sea lion incidental catch <strong>and</strong> necropsy data for the fishing years 2000-01, 2001- 02 <strong>and</strong> 2002-03, Unpublished Report prepared for the NZ Ministry of Fisheries, Wellington, NZ. July 2004, 21 p. Mattlin, R.H., 1993. Incidental catch of fur seals in the west coast South Isl<strong>and</strong> hoki trawl fishery, 1989-92, New Zeal<strong>and</strong> Fisheries Assessment Research Document 93/19., 17 p. Maunder, M., 2007. Assessment of risk of yellow-eyed penguins Megadyptes antipodes from fisheries incidental mortality in New Zeal<strong>and</strong> fisheries <strong>and</strong> definition of information requirements for managing fisheries related risk Unpublished Final Research Report for the Ministry of Fisheries, 29 p. Maxwell, K., MacDiarmid, A., In Press. Oral histories of Maori marine resource state <strong>and</strong> use in the Hauraki Gulf <strong>and</strong> along the Otago-Catlins coast 1940-2008, Darft <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report xx p. McElderry, H., Schrader, J., Anderson, S., 2007. Electronic Monitoring to Assess Protected Species Interactions in New Zeal<strong>and</strong> Longline Fisheries: A Pilot Study Unpublished report prepared for the New Zeal<strong>and</strong> Ministry of Fisheries, Wellington, NZ by Archipelago Marine Research Ltd., Victoria, British Columbia, Canada., 45 p. McElderry, H., Schrader, J., Anderson, S., 2008. Electronic monitoring to assess protected species interactions in New Zeal<strong>and</strong> longline fisheries: a pilot study, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 24, 39 p. McMillan, P., Griggs, L., Francis, M., Marriott, P., Paul, L., Mackay, E., Wood, B., Sui, H., Wei, F., 2011a. New Zeal<strong>and</strong> fishes. 1: A guide to common species caught by trawling, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report. No. 68, 331 p. McMillan, P., Griggs, L., Francis, M., Marriott, P., Paul, L., Mackay, E., Wood, B., Sui, H., Wei, F., 2011b. New Zeal<strong>and</strong> fishes. 2: A guide to less common species caught by trawling, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report. No 78, 184 p. McMillan, P., Griggs, L., Francis, M., Marriott, P., Paul, L., Mackay, E., Wood, B., Sui, H., Wei, F., 2011c. New Zeal<strong>and</strong> fishes 3: A guide to common species caught by surface fishing methods, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 69, 147 p. McMillan, P., Iwamoto, T., Stewart, A., Smith, P., <strong>2012</strong>. A new species of grenadier, genus Macrourus (Teleostei, Gadiformes, Macrouridae) from the Antarctic <strong>and</strong> a revision of the genus. Zootaxa 3165: 1-24. McMillan, P., Marriott, P., Hanchet, S., Fenaughty, J., Mackay, E., Sui, H., 2007. Field identification guide to the main fishes caught in the Ross Sea long-line fishery., Unpublished Final Research Report to the Ministry of Fisheries. Project ANT2005/02, objective 7. , 14 p. Meynier, L., 2010. New Zeal<strong>and</strong> sea lion bio-energetic modelling, Unpublished Final Report for Project IPA2009-09. Presented to AEWG May 17 2011, Wellington, New Zeal<strong>and</strong>, 34 p. Michael, K., Kroger, K., Richardson, K., Hill, N., 2006. Summary of information in support of the Foveaux Strait Oyster Fishery Plan: the Foveaux Strait ecosystem <strong>and</strong> effects of oyster dredging, Unpublished Final Research Report for Ministry of Fisheries project ZBD2005-04, xx p. Middleton, D., Abraham, E., 2007. The efficacy of warp strike mitigation devices: trials in the 2006 squid fishery, Unpublished Final Research Report for the Ministry of Fisheries for project IPA2006-02, xx p. Ministry of Fisheries, 2008. Bottom Fishery Impact Assessment: Bottom Fishing Activities by New Zeal<strong>and</strong> Vessels Fishing in the High Seas in the SPRFMO Area during 2008 <strong>and</strong> 2009, Available from http://www.southpacificrfmo.org/benthicimpact-assessments/, Wellington, 102 p. Mitchell, J., 2008. Initial environmental evaluation (IEE) NZ IPY-CAML voyage 2008 report, Unpublished Report prepared for Antarctic Policy Unit, Ministry of Foreign Affairs <strong>and</strong> Trade., 35 p. Mitchell, J., Clark, M., 2004. Voyage report TAN04-02. Western Ross Sea voyage 2004. Hydrographic <strong>and</strong> biodiversity survey RV Tangaroa 27 January to 13 March 2004. Cape Adare, Cape Hallett, Possession Isl<strong>and</strong>s <strong>and</strong> Balleny Isl<strong>and</strong>s, Antarctica. , NIWA Voyage Report TAN04-02, Unpublished report held in NIWA library, Wellington, 102 p. Mitchell, J., MacDiarmid, A., 2006. Voyage Report TAN06-02 Eatern Ross Sea Voyage, Unpublished report for MFish project ZBD2005-03, xx p. Mormede, S., Baird, S., Smith, M., 2008 Factors that may influence the probability of fur seal capture in selected New Zeal<strong>and</strong> fisheries, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report. No. 19, 42 p. Morrison, M., D, P., 2008. Distribution <strong>and</strong> abundance of toheroa (Paphies ventricosa) on Ninety Mile Beach, March 2006, New Zeal<strong>and</strong> Fisheries Assessment Report 2008/26, 27 p. Morrison, M., Lowe, M., Parsons, D., Usmar, N., McLeod, I., 2009. A review of l<strong>and</strong>-based effects on coastal fisheries <strong>and</strong> supporting biodiversity in New Zeal<strong>and</strong>, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 37, 100 p. Murray, T., Taylor, P., Greaves, J., Bartle, J., Molloy, J., 1992. Seabird bycatch by Southern Fishery longline vessels in New Zeal<strong>and</strong> waters, New Zeal<strong>and</strong> Fisheries Assessment Research Document 92/22, 21 p. Naylor, J., Webber, W., Booth, J., 2005. A guide to common offshore crabs in New Zeal<strong>and</strong> waters., New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 2, 47 p. Neil, H., MacDiarmid, A., Marriot, P., Paul, L., Horn, P., In Press. Insights into historical New Zeal<strong>and</strong> marine shelf productivity using ancient fish otoliths, Unpublished Final Research Report for Project ZBD200505 MS6 - Part B, Ministry of Fisheries, Wellington, New Zeal<strong>and</strong>., xx p. Neill, K., D’Archino, R., Farr, T., Nelson, W., <strong>2012</strong>. Macroalgal diversity associated with soft sediment habitats in New Zeal<strong>and</strong>, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 87, 130 p. Nelson, W., Cummings, V., D’Archino, R., Halliday, J., Marriott, P., Neill, K., 2010. Macroalgae <strong>and</strong> benthic biodiversity of the Balleny Isl<strong>and</strong>s, Southern Ocean, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 55, 99 p. 382
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PROTECTED SPECIES AEBAR 2012: Appen
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PROTECTED SPECIES continued Project
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