AEBAR <strong>2012</strong>: Marine <strong>Biodiversity</strong> Rowden, A.A., O'Shea, S., Clark, M.R. (2002). Benthic biodiversity of seamounts on the northwest Chatham Rise. Marine <strong>Biodiversity</strong> Biosecurity Report No. 2. 21 p. Rowden, A.A.; Clark, M.R.; Wright, I.C. (2005). Physical characterisation <strong>and</strong> a biologically focused classification of "seamounts" in the New Zeal<strong>and</strong> region. New Zeal<strong>and</strong> Journal of Marine <strong>and</strong> Freshwater Research 39: 1039-1059. Russell LK, Hepburn CD, Hurd CL, Stuart MD. 2008 The exp<strong>and</strong>ing range of Undaria pinnatifida in southern New Zeal<strong>and</strong>: distribution, dispersal mechanisms <strong>and</strong> the invasion of wave-exposed environments. Biol Invasions.;10:103–115. Safi, K.; Robinson, K.; Hall, J.; Schwarz, J.; Maas, E. (<strong>2012</strong>). Ross Sea deep-ocean <strong>and</strong> epipelagic microzooplankton during the summerautumn transition period. <strong>Aquatic</strong> Microbial Ecology 67(2): 123-137. Savage C, Thrush SF, Lohrer AM, Hewitt JE (<strong>2012</strong>) Ecosystem Services Transcend Boundaries: Estuaries Provide Resource Subsidies <strong>and</strong> Influence Functional Diversity in Coastal Benthic Communities. PLoS ONE 7(8): e42708. doi:10.1371/journal.pone.0042708 Savage, C. (2009). Development of bioindicators for the assimilation of terrestrial nutrient inputs in coastal ecosystems as a tool for watershed management. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 30. 35 p. Schiaparelli S, Alvaro MC, Bohn J, Albertelli G (2010) 'Hitchhiker' polynoid polychaetes in cold deep waters <strong>and</strong> their potential influence on benthic soft bottom food webs. Antarctic Science 22:399-407 Schiel. D.R. (2011) Biogeographic patterns <strong>and</strong> long-term changes on New Zeal<strong>and</strong> coastal reefs: Non-trophic cascades from diffuse <strong>and</strong> local impacts. Journal of Experimental Marine Biology <strong>and</strong> Ecology 400:1-2, 33-51 Online publication date: 1-Apr-2011 Read More: http://www.esajournals.org/doi/abs/10.1890/03-3107 Schwarz, A., Taylor, R., Hewitt, J., Phillips, N., Shima, J., Cole, R., Budd, R. (2006). Impacts of terrestrial runoff on the biodiversity of rocky reefs. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No 7. 109 p. Schwarz, A-M., Hawes, I., Andrew, N., Mercer, S., Cummings, V., Thrush, S. (2005). Primary production potential of non-geniculate coralline algae at Cape Evans, Ross Sea, Antarctica. Marine Ecology Progress Series 294: 131-140. Schwarz, A-M., Hawes, I., Andrew, N., Norkko, A., Cummings, V., Thrush, S. (2003). Macroalgal photosynthesis near the southern global limit for growth; Cape Evans, Ross Sea, Antarctica. Polar Biology 26: 789-799. Sewell, M.A., (2005). Examination of the meroplankton community in the southwestern Ross Sea, Antarctica, using a collapsible plankton net. Polar Biol. 28:119–131. Sewell, M.A., (2006). The meroplankton community of the northern Ross Sea: a preliminary comparison with the McMurdo Sound region. Antarct. Sci. 18:595–602. Sewell, M.A., Lavery, S., Baker, C.S. (2006). Whose larva is that? Molecular identification of planktonic larvae of the Ross Sea. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 3. 57 p. Sharp, B.R., S.J. Parker, M.H. Pinkerton (lead authors); also B.B. Breen, V. Cummings, A. Dunn, S.M. Grant, S.M. Hanchet, H.J.R. Keys, S.J. Lockhart, P.O’B. Lyver, R.L. O’Driscoll, M.J.M. Williams, P.R. Wilson. (2010). Bioregionalisation <strong>and</strong> Spatial Ecosystem Processes in the Ross Sea Region. CCAMLR document WG-EMM-10/30, Hobart, Australia. Smith AM. (2009) Bryozoans as southern sentinels of ocean acidification: a major role for a minor phylum. Mar Freshw Res.;60:475–482. Smith AM. Gordon, D. (2011). Bryozoans of southern New Zeal<strong>and</strong> Field Identification Guide AEBR. Smith PJ, Steinke D, McMillan PJ, Stewart AL, McVeagh SM, Diaz De Astarloa JM, Welsford D, Ward RD. (2011). DNA barcoding highlights a cryptic species of grenadier (genus Macrourus) in the Southern Ocean. Journal of Fish Biology, 78(1):355-65. Smith PJ, Steinke, D, McMillan PJ, Stewart AL, Ward RD. (2011). DNA barcoding of morids (Actinopterygii, Moridae) reveals deep divergence in the anti tropical Halargyreus johnsoni but little distinction between Antimora rostrata <strong>and</strong> A. microlepis. Mitochondrial DNA, (doi:10.3109/19401736.2010.532329). Smith, F. (2006). Balleny Isl<strong>and</strong>s Ecology Research Voyage Report, R.V. Tiama. Unpublished report held at Ministry of Fisheries for project ZBD2005/01. Smith, I.W.G. (2005). Retreat <strong>and</strong> resilience: Fur seals <strong>and</strong> human settlement in New Zeal<strong>and</strong>. In: Monks, G.G. (ed) The Exploitation <strong>and</strong> Cultural Importance of Marine Mammals. Oxford, Oxbow Books. 6-18. Smith, I.W.G. (2011). Estimating the magnitude of pre-European Maori marine harvest in two New Zeal<strong>and</strong> study areas, New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report, No. 82, p. 72 p) Smith, P.J., Steinke, D., McMillan, P.J., McVeagh, S.M., Struthers, C.D. (2008). DNA database for commercial marine fish. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 22. 62 p. Snelder T, Leathwick J, Dey K, Rowden A, Weatherhead M, (2006). Development of an ecological marine classification in the New Zeal<strong>and</strong> region. Envir Managemt.;39:12–29. Stein D. (<strong>2012</strong>). Snailfishes (Family Liparidae) of the Ross Sea, Antarctica, <strong>and</strong> closely adjacent waters. Zootaxa 3285. 120 pp. ISBN 978- 1-86977-870-5 (Online edition) Stevens DW. Dunn MR. (2010). Different food preferences in four sympatric deep-sea Macrourid fishes. Marine Biology. DOI 10.1007/s00227-010-1542-1 Stevens, D.W.; Hurst, R.J.; Bagley, N.W. (2011). Feeding habits of New Zeal<strong>and</strong> fishes: a literature review <strong>and</strong> summary of research trawl database records 1960 to 2000. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No Sutherl<strong>and</strong> DL. (2008). Surface-associated diatoms from marine habitats at Cape Evans, Antarctica, including the first record of living Eunotogramma marginopunctatum. Polar Biology DOI 10.1007/s00300-008-0426-z. Thrush SF <strong>and</strong> Dayton PK (2002) Disturbance to marine benthic habitats by trawling <strong>and</strong> dredging: implications for marine biodiversity. <strong>Annual</strong> <strong>Review</strong> of Ecology <strong>and</strong> Systematics 33:449–473 Thrush, S.F. <strong>and</strong> Cummings, V.J. (2011). Massive icebergs, alteration in primary food resources <strong>and</strong> change in benthic communities at Cape Evans, Antarctica. Marine Ecology, 32:289–299. Thrush, S.F. & Dayton, P. (2010). What can ecology contribute to Ecosystem-based Management of marine fisheries? <strong>Annual</strong> <strong>Review</strong>s in Marine Science, 2:419-441. Thrush, S.F. & Lohrer, A.M. (<strong>2012</strong>). Why bother going outside: the role of observational studies in underst<strong>and</strong>ing biodiversity-ecosystem function relationships. In, Marine biodiversity futures <strong>and</strong> ecosystem functioning Frameworks, methodologies <strong>and</strong> integration, edited by D. M. Paterson, M. Solan <strong>and</strong> R. Aspenal, Oxford University Press, p198-212. Thrush, S.F. D. Lohrer <strong>and</strong> C. Savage (in press) Carbonate sediments: the positive <strong>and</strong> negative effects of l<strong>and</strong>-coast interactions on functional diversity, AEBR report; Thrush, S.F., Chiantore, M., Asnagi, V., Hewitt, J., Fiorentino, D. & Cattaneo-Vietti, R. (2011). Habitat-diversity relationships in rocky shore algal turf infaunal communities Marine Ecology Progress Series, 424:119-132. Thrush, S.F., Cummings, V.J. (in press) Massive icebergs, alteration in primary food resources <strong>and</strong> change in benthic communities at Cape Evans, Antarctica. Marine Ecology. Thrush, S.F., Cummings, V.J. (2011). Massive icebergs, alteration in primary food resources <strong>and</strong> change in benthic communities at Cape Evans, Antarctica. Marine Ecology 32 (3): 289–299. doi: 10.1111/j.1439-0485.2011.00462.x 293
AEBAR <strong>2012</strong>: Marine <strong>Biodiversity</strong> Thrush, S.F., Dayton, P.K., Cattaneo-Vietti, R., Chiantore, M., Cummings, V.J., Andrew, N.L., Hawes, I., Kim, S., Kvitek, R., Schwarz, A.- M. (2006). Broad-scale factors influencing the biodiversity of coastal benthic communities of the Ross Sea. Deep Sea Research II 53: 959–971. Thrush, S.F., Hewitt, J., Cummings, V.J., Norkko, A. & Chiantore, M. (2010). β-Diversity <strong>and</strong> species accumulation in Antarctic coastal benthos: Influence of habitat, distance <strong>and</strong> productivity on ecological connectivity. PLoS ONE,5:E11899. Thrush, S.F., Hewitt, J.E. & Lohrer, A.M. (<strong>2012</strong>). Interaction networks in coastal soft-sediments highlight the potential for change in ecological resilience. Ecological Applications, 22:1213–1223. Thrush, S.F., Hewitt, J.E., Lohrer A.M., Chiaroni L.D. (In press). When small changes matter: the role of cross-scale interactions between habitat <strong>and</strong> ecological connectivity in recovery. Ecological Applications. Thrush, S.F.; Hewitt, J.E.; Cummings, V.J.; Green, M.O.; Funnell, G.A.; Wilkinson, M.R. (2000). The generality of field experiments: interactions between local <strong>and</strong> broad-scale processes. Ecology 81: 399–415. Thrush, S.F.; Pridmore, R.D.; Bell, R.G.; Cummings, V.J.; Dayton, P.K.; Ford, R.; Grant, J.; Hewitt, J.E.; Hines, A.H.; Hume, T.M.; Lawrie, S.M.; Legendre, P.; McArdle, B.H.; Morrisey, D.; Schneider, D.C.; Turner, S.J.; Walters, R.; Whitlatch, R.B.; Wilkinson, M.R. (1997). The s<strong>and</strong>flat habitat: Scaling from experiments to conclusions. Journal of Experimental Marine Biology <strong>and</strong> Ecology 216: 1_9. [did not see this referred to in the text] Tittensor, D.P., A.R. Baco, P.E. Brewin, M.R. Clark, M. Consalvey, J. Hall-Spencer, A.A. Rowden, T. Schlacher, K.I. Stocks <strong>and</strong> A.D. Rogers (2009). Predicting global habitat suitability for stony corals on seamounts. Journal of Biogeography, 36: 1111–1128. Townsend, M., Thrush, S. & Carbines, M. (2011). Simplfying the complex: an ecosystem principles approach to goods <strong>and</strong> services management in marine coastal systems. Marine Ecology Progress Series, 434:291-301. Tracey, D.; Baird, S.J.; S<strong>and</strong>ers, B.M.; Smith, M.H. (2011). Distribution of protected corals in relation to fishing effort <strong>and</strong> assessment of accuracy of observer identification. NIWA Client Report No: WLG2011-33 prepared for Department of Conservation, Wellington. 74 p. Tracey, D., Carter, M., Parker, S. (2010). Evaluation of VME taxa monitoring by scientific observers. Final Research Report for Ministry of Fisheries Research Project ANT2009/01 Objective 8. 17 p. Tracey, D., Rowden, A., Mackay, K., Compton, T. (2011). Habitat-forming coldwater corals show affinity for seamounts in the New Zeal<strong>and</strong> region. Mar Ecol Prog Ser 430, 1–22. Tracey, D., Susan Jane Baird, S.J. Brian S<strong>and</strong>ers, B., Smith, M. H. Smith (2011). Identification of Protected Corals: distribution in relation to fishing effort <strong>and</strong> accuracy of observer identifications (MCSINT 2010/03). Final Report prepared for Marine Conservation Services (MCS), Department of Conservation | Te Papa Atawhai. 74 p. Tracey, D.M., Anderson, O.F., Clark, M.R., Oliver, M.D. (2005). A guide to common deepsea invertebrates in New Zeal<strong>and</strong> waters. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 1. 160 p. Tracey, D.M., Anderson, O.F., Naylor, J. R. (2007). A guide to common deepsea invertebrates in New Zeal<strong>and</strong> waters. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 10. 282 p. Tracey, D.M.; Anderson, O.F.; Naylor, R.J. (2011). A guide to common deepsea invertebrates in New Zeal<strong>and</strong> waters. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report 86. 317 p. Tuck, I., Cole, R., Devine, J. (2009). Ecosystem indicators for New Zeal<strong>and</strong> fisheries. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 42. 188 p. Tuck, I., Drury, J., Kelly, M., Gerring, P. (2010). Designing a programme to monitor the recovery of the benthic community between North Cape <strong>and</strong> Cape Reinga. New Zeal<strong>and</strong> <strong>Aquatic</strong> <strong>Environment</strong> <strong>and</strong> <strong>Biodiversity</strong> Report No. 53. 78 p. Turner SJ, Thrush SF, Hewitt JE, Cummings VJ, Funnell GA. (1999). Fishing impacts <strong>and</strong> the degradation or loss of habitat structure. Fish Managemt Ecol.;6:401–420. Varian, S.J. (2005). A summary of the values of the Balleny Isl<strong>and</strong>s, Antarctica. Marine <strong>Biodiversity</strong> Biosecurity Report No. 6. 13 p. Williams R, Gould B, Christian S. Shipwrecks 2008— an international biosecurity risk? Surveillance.;35:4–6. Williams, A.; Schlacher, T.A.; Rowden, A.A.; Althaus, F.; Clark, M.R.; Bowden, D.A.; Stewart, R.; Bax, N.J.; Consalvey, M.; Kloser, R.J. (2010) Seamount megabenthic assemblages fail to recover from trawling impacts. Marine Ecology 31(suppl. 1): 183–199. Wing, S.R. (2005) Fiordl<strong>and</strong> <strong>Biodiversity</strong> Research Cruise Final Research Report ZBD2003-04 Woelkerling, Wm J.; Nelson, W.A. (2004). A baseline summary <strong>and</strong> analysis of the taxonomic biodiversity of coralline red algae (Corallinales, Rhodophyta) recorded from the New Zeal<strong>and</strong> region. Cryptogamie Algologie 25: 39-106. Woodin, S.A., Wethey, D.S., Hewitt, J.E. & Thrush, S.F. (<strong>2012</strong>). Small scale terrestrial clay deposits on intertidal s<strong>and</strong>flats: Behavioral changes <strong>and</strong> productivity reduction. Journal of Experimental Marine Biology <strong>and</strong> Ecology,413:184–191. 294
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ISBN: 978-0-478-40503-3 (print) ISB