2008 Barcelona - European Society of Human Genetics

2008 Barcelona - European Society of Human Genetics 2008 Barcelona - European Society of Human Genetics

24.08.2013 Views

Normal variation, population genetics, genetic epidemiology Methods: To investigate possible biologic gender differences in normal α-galactosidase activity, plasma and leukocyte enzyme activities were determined in eight male and nine female healthy unrelated Caucasian young adults . All subjects had been genotyped and carried the standard genomic sequence for the 5’ untranslated region of the α-galactosidase gene, a region that may contain single nucleotide polymorphisms affecting the level of gene expression . Differences in gender means were compared by the independent samples t-test . Results: The mean (±SD) α-galactosidase activity levels were 28.7 (±3.7) and 27.5 (±4.7) μkat/Kg in leukocytes (p=0.57) whereas mean plasma activities±SD were 2 .2 (±0 .5) and 2 .9 (±0 .7) nkat/L (p=0 .03), respectively for males and females . Conclusion: There seems to be a gender difference in normal plasma α-galactosidase activity. This finding, if confirmed in a larger sample, may have to be taken into account in the definition of normal laboratory reference ranges and may warrant a reassessment of the sensitivity of the plasma α-galactosidase assay for the identification of females with Fabry disease . We hypothesize that a higher fractional post-translational sialylation of the newly synthesized enzyme in the female Golgi apparatus may contribute to this difference . P07.009 Familial amyloid polyneuropathy (AttR V30m): a change in paradigm? A. Sousa 1,2 , A. M. Silva 3 , L. Maia 3 , T. Coelho 3 ; 1 ICBAS (Instituto Ciências Biomédicas Abel Salazar), U.P., Porto, Portugal, 2 IBMC (Instituto Biologia Molecular e Celular), U.P, Porto, Portugal, 3 Unidade Clínica de Paramiloidose, HGSA (Hospital Geral Santo Antonio), Porto, Portugal. Andrade first described FAP (1952) as a disease occurring between 25 and 35 yrs . He reported 64 patients, 13 of which had no family history of the disease . Later PE Becker established its AD mode of inheritance and interpreted isolated cases not as a de novo mutation but as the expression of incomplete penetrance of the gene in one of the parents. This hypothesis could only be tested after the finding of the mutation in 1985 . Our aims were: 1) to estimate the number of probands with no affected parent at time of diagnosis; 2) to study age at onset of proband and its changes over time . Between 1939 and 2005, 2075 patients (525 families) were diagnosed at HGSA. Families were classified as “new” when the proband reported no similar disease in earlier generations . Age-at-onset varied from 20-80 yrs (mean 37 .1 in women, 32 .4 in men) . 209 probands (40%) had no affected parent at time of diagnosis . This type of family represented 68% of those diagnosed in last decade (only 27% before 1985) . Mean age-at-onset of probands of “new” families was 46 .0 yrs (vs. 32 .3 yrs for “classical” families) and it has increased over time, being 49 .5 yrs in last decade . Regarding FAP two realities coexist in Portugal: families with several generations of affected (where probands have “classical” onset) and probands with late-onset who report no similar disease in previous generations . The mutation may cross generations without clinical manifestations, then expresses as late-onset and later anticipation occurs . P07.010 the ß 2 -adrenergic receptor gene polymorphism and arterial hypertension in children S. V. Kuzmina 1 , M. A. Bogdanova 2 , O. S. Romashkina 2 , O. A. Mutafyan 1 , V. I. Larionova 2 ; 1 St.Petersburg State Medical Academy of Postgraduate Studies, Saint-Petersburg, Russian Federation, 2 St.Petersburg State Pediatric Medical Academy, Saint-Petersburg, Russian Federation. The ß 2 -adrenergic receptor (ADRB2) is thought to be associated with arterial hypertension (AH) and its altered function can results in increased blood pressure (BP) . Q/E27 polymorphism of ADRB2 gene is considered functionally important . Though some reports indicate that polymorphism in the ADRB2gene is associated with essential hypertension, its role in BP levels remains unclear . The aim of this study were to investigate distribution of ADRB2 genotypes and allele frequencies of Q/E27 polymorphism in hypertensive and normotensive children and to compare clinical systolic BP levels between carriers of the different genotypes . 84 children with systolic AH (aged 7-17) and 90 normotensive children (aged 7-17) were include the study . Arterial hypertension was defined as systolic/diastolic blood pressure measurements higher than 95 age-gender-height percentile of the adopted reference values . DNA was extracted from blood samples according to standard protocols . The Q/E27 polymorphism was genotyped by using the PCR restriction fragment length polymorphism analysis . The distribution of ADRB2 genotypes and allele frequencies did not differ significantly between patients with AH and control subjects. Clinical systolic BP in patients with QQ- genotype was 133,65±11,5 mm Hg, QE-genotype was 133,43±8,4 mm Hg, EE- genotype was 132,52±7,5 mm Hg . Clinical systolic BP differences among genotypes were not found . The allelic and genotypic frequencies of the Q/E27 polymorphism in hypertensive and control subject Q/E27 Hypertensive (n=84) Control (n=90) p QQ 17 (20,2%) 14 (15,6%) 0,722 QE 46 (54,8%) 52 (57,8%) EE 21 (25,0%) 24 (26,7%) Q 80 (47,6%) 80 (44,4%) 0,5527 E 88 (52,4%) 100 (55,6%) P07.011 iL4 genetic polymorphisms contribution to madeira population risk of asthma A. G. Berenguer1 , R. Câmara2 , A. T. G. Fernandes1 , S. Oliveira2 , A. Brehm1 ; 1 2 Human Genetics Laboratory, Funchal, Portugal, Imunoallergology Unit, Central Hospital of Funchal, Funchal, Portugal. The allergic disease prevalence is influenced by both environmental exposure and the population’s genetic predisposition to the disease . Five different polymorphisms of previously associated genes to some of asthma’s phenotypic characteristics namely IL4RP2 and IL4-590 (C/T) at 5q31-32; ADRB2 16A/G at 5q31-32; ADAM33 S1 (G/A) and ADAM33 V4 (C/G) at 20p13 were studied in 28 asthmatic children with positive skin prick test to house dust mite from affected sib-pair families composed by two children and their biological parents . Allele frequencies from asthmatic patients were then compared to a sample from Madeira general population . Both genotypic and allelic frequencies as well as comparisons between both groups were accessed by ARLEQUIN 3 .1 . We have found significant differences regarding both IL4RP2 and IL4- 590 (C/T) polymorphisms between the two groups (p

Normal variation, population genetics, genetic epidemiology posed to tobacco smoke (mother smoked actively) . For the exposure scenario “mother smokes during the first trimester of pregnancy”, the OR for AE within the first years of the children’s life are statistically significant (at the age of 1 year: OR . [95%CI: 1 .0-41]; 1 1 / 2 : OR . [95%CI: 2 .0-43 .9]; 2: OR . [95%CI: 1 .2-24 .6] as well as 6 years: OR . [95%CI: 0 .8-15 .5], adjusted to gender, positive family history of atopy, vaccination and infections and refurbishing during pregnancy) . Children without tobacco smoke exposure show no association between the genotype combination and a higher risk for AE . Additionally, “smoking after pregnancy” could confirm the previously association, but only by a trend due to the small subgroup . These associations show a putative role of the gene-environment-interactions in the manifestation of AE. However, an identification of a closer time-frame of risk toward the exposure “mother smokes” is not yet possible . P07.013 Prevalence of mutations in the OTOF, PJVK and DDP genes in subjects with auditory neuropathy M. Rodríguez-Ballesteros 1,2 , L. A. Aguirre 1,2 , H. del Águila 1 , R. Reynoso 3 , C. Morera 4 , R. Santarelli 5 , E. Arslan 5 , C. Curet 3 , C. Völter 6 , C. Vincent 7 , E. Gómez- Rosas 1,2 , M. Villamar 1,2 , M. A. Moreno-Pelayo 1,2 , J. Moreno-Barral 3 , F. Moreno 1,2 , I. del Castillo 1,2 ; 1 Unidad de Genética Molecular, Hospital Ramón y Cajal, Madrid, Spain, 2 Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), ISCIII, Madrid, Spain, 3 Facultad de Ciencias Médicas, Univ. Nacional de Córdoba, Córdoba, Argentina, 4 Servicio de ORL, Hospital Universitario La Fe, Valencia, Spain, 5 Department of Medical and Surgical Specialities, Audiology and Phoniatric Service, Univ. of Padova, Padua, Italy, 6 ENT Department, University of Würzburg, Würzburg, Germany, 7 Department of Otology and Otoneurosurgery, Centre Hospitalier Universitaire, Lille, France. Auditory neuropathy (AN) encompasses a variety of disorders characterized by normal otoacoustic emissions (OAE) and absent or grossly abnormal auditory brainstem responses (ABR) in the affected subjects . AN can result from environmental or genetic causes . It can be part of a systemic neurodegenerative disorder or it can be an isolated clinical entity . The primary lesion in AN can be located in the inner hair cells, in the auditory nerve, or in the synapse in between . In the last few years, several genes have been shown to be involved in AN . We have investigated the prevalence of mutations in the genes encoding otoferlin, pejvakin and TIMM8a (OTOF, DFNB59 and DDP1, respectively) in subjects with isolated auditory neuropathy . A cohort of 36 unrelated subjects with isolated auditory neuropathy were screened for mutations in these genes by DNA sequencing of all exons and flanking intronic sequences . In 25 subjects (69%), we found two mutant alleles of OTOF, two of the mutations being novel . In one subject (2 .8%), we found a novel mutation in the DDP1 gene . Mutations in this gene are responsible for Mohr-Tranebjaerg syndrome, an X-linked condition associating deafness and muscular dystonia . The affected child did not present with dystonia at the age at which the study was performed . No mutations were found in the DFNB59 gene . Our results show that mutations in the OTOF gene are a major cause of inherited auditory neuropathy and suggest that cohorts of apparently isolated auditory neuropathy may contain additional cases of the rare Mohr-Tranebjaerg syndrome . P07.014 Specific genetic diagnoses in Autism Spectrum Disorders. A 10year genetic study of 159 patients from 5 psychiatric outpatient care units S. Lapuyade 1 , M. Assouline 1 , S. Martin 1 , J. Malen 2 , G. Rolland-Manuel 3 , A. Terkmani 4 , J. Lena 5 , J. Amiel 5 , J. Bonnefont 5 , L. Colleaux 5 , V. Cormier-Daire 5 , M. De Blois 5 , S. Lyonnet 5 , V. Malan 5 , A. Philippe 5 , O. Raoul 5 , M. Rio 5 , A. Munnich 5 , S. Whalen 5 ; 1 Hôpital de Jour Santos Dumont, Paris, France, 2 Hôpital de Jour Sésame Autisme, Chevilly-La-Rue, France, 3 Hôpital de Jour d’Antony, Antony, France, 4 IME Alternat, Antony, France, 5 Département de génétique, Hôpital Necker Enfants Malades, Paris, France. Since 1998, a collaborative study has been undertaken between the genetic department of Necker Enfants Malades hospital and 5 psychiatric outpatient care units of Île-de-France region . From 1998 to 2008, 159 patients with autistic spectrum disorders (ASDs) have undergone on-site genetic consultation gathering the following data: family and personal medical history, detailed psychiatric evaluation, dysmorphological and neurological clinical examination . Blood and/or urine samples were collected for genetic testing each time a specific disorder was suggested after the first consultation, or for systematic screening of common ASD-related disorders . Systematic screening comprised high resolution banding karyotype, with 22q13 and 15q11q13 FISH analyses, FMR1 gene triplet expansion testing, and metabolic screening (blood aminoacid and urine organic acid chromatographies, AICAR, urinary creatin and guanidinoacetate, N-glycosylation, lactate, pyruvate, ammonium). CGH-array analysis was undertaken in 6% of patients thus far . Most of the 159 ASD patients (50 females and 106 males) had associated mental retardation ranging from mild to profound . 21 specific diagnoses were obtained for 30 patients: fragile X (8 patients), 15q11q13 duplication (2 patients), 22qter deletion, 22q11 .2 deletion, 1p36 deletion, Williams syndrome, trisomy X, Turner syndrome, interstitial 19q deletion, mosaic ring 15, 8q23q24 duplication, 17p11 .2 duplication, 1q31 duplication, 1q21 duplication, AP1S2 mutation, Prader-Willi, Cornelia de Lange, CHARGE and Rubinstein-Taybi syndromes, creatin transporter deficiency (2 patients), GAMT deficiency, phenylketonuria, and histidinaemia . We present a cohort of 159 patients with ASD. 23 specific genetic disorders were found in 32 patients (20,1 %) . These results emphasize the importance of on site evaluation of these patients . P07.015 Analysis of AcE and At1R gene polymorphisms in Balkan Endemic Nephropathy Z. Krcunovic 1 , I. Novakovic 1 , N. Maksimovic 1 , D. Bukvic 2 , S. Simic-Ogrizovic 3 , L. Djukanovic 3 , S. Jankovic 4 ; 1 Institute of Human Genetics, School of Medicine, Belgrade, Serbia, 2 Institute of Endemic Nephropathy, Lazarevac, Serbia, 3 Institute of Nephrology and Urology, Belgrade, Serbia, 4 Institute of Epidemiology, Belgrade, Serbia. Balkan endemic nephropathy (BEN) is a multifactorial disorder with still unexplained hereditary component . Similarity of BEN and cyclosporine nephropathy suggests possible common ethiopathogenetic mechanisms . Considering the role of renin-angiotensin system in emergence of cyclosporine nephropathy and other types of kidney disease, candidate genes for association studies in BEN were chosen . We performed analysis of I/D polymorphism in gene encoding for angiotensin-converting enzyme (ACE) and A1166C polymorphism in gene encoding for type I receptor for angiotensin II (AT1R) . The study was carried out in a group of 50 patients with BEN diagnosis according to criteria of Danilovic, derived from endemic region in Kolubara district . Two control groups consisted of 50 healthy persons (C) and of 45 patients with other nephropathies (NBEN), both matched by age and gender . DNA for gene analysis was extracted from peripheral blood leukocytes . For detection of ACE I/D and AT1R A1166C gene polymorphisms PCR and PCR/RFLPS methods were used, respectively . We found that frequency of ACE DD genotype was 41 .66%, 43 .14% and 84 .61% in BEN, C and NBEN group, respectively . For AT1R A1166C gene polymorphism frequency of CC genotype was 10 .41%, 8 .69% and 5 .72%, respectively . Our results showed no difference in analysed genotypes between BEN and C group. However, we found significantly higher frequency of ACE DD genotype and lower frequency of AT1R 1166 CC genotype in NBEN group . Although these results do not indicate significant role of ACE and AT1R gene polymorphisms in BEN, we will proceed in investigation of other members of renin-angiotensin system . P07.016 compound heterozygosity between Hbs and b-thalassemia. implication for the neonatal diagnostic of hemoglobinopathies S. Pissard 1,2 , N. Ellachtar 3 , C. Albert 1 , C. Godart 1 , F. Galacteros 4 , H. Puehringer 5 , C. Oberkanins 5 , H. Wajcman 3 ; 1 laboratory of genetics, AP-HP,Hop Henri Mondor, creteil, France, 2 INSERM, U841 eq 11, Creteil, France, 3 INSERM, U841 eq 11, creteil, France, 4 UMGGR, AP-HP, Hop Henri mondor, creteil, France, 5 ViennaLab Diagnostics, Vienna, Austria. Compound heterozygosity between Hb S and b-thalassemia is a form of sickle cell anemia (SCA) with a clinical severity varying considerably . The clinical phenotype depend upon the type of thalassemic defect but also on other factors . To clarify the spectrum of b-thal associated with

Normal variation, population genetics, genetic epidemiology<br />

Methods: To investigate possible biologic gender differences in normal<br />

α-galactosidase activity, plasma and leukocyte enzyme activities were<br />

determined in eight male and nine female healthy unrelated Caucasian<br />

young adults . All subjects had been genotyped and carried the<br />

standard genomic sequence for the 5’ untranslated region <strong>of</strong> the α-galactosidase<br />

gene, a region that may contain single nucleotide polymorphisms<br />

affecting the level <strong>of</strong> gene expression . Differences in gender<br />

means were compared by the independent samples t-test .<br />

Results: The mean (±SD) α-galactosidase activity levels were 28.7<br />

(±3.7) and 27.5 (±4.7) μkat/Kg in leukocytes (p=0.57) whereas mean<br />

plasma activities±SD were 2 .2 (±0 .5) and 2 .9 (±0 .7) nkat/L (p=0 .03),<br />

respectively for males and females .<br />

Conclusion: There seems to be a gender difference in normal plasma<br />

α-galactosidase activity. This finding, if confirmed in a larger sample,<br />

may have to be taken into account in the definition <strong>of</strong> normal laboratory<br />

reference ranges and may warrant a reassessment <strong>of</strong> the sensitivity <strong>of</strong><br />

the plasma α-galactosidase assay for the identification <strong>of</strong> females with<br />

Fabry disease . We hypothesize that a higher fractional post-translational<br />

sialylation <strong>of</strong> the newly synthesized enzyme in the female Golgi<br />

apparatus may contribute to this difference .<br />

P07.009<br />

Familial amyloid polyneuropathy (AttR V30m): a change in<br />

paradigm?<br />

A. Sousa 1,2 , A. M. Silva 3 , L. Maia 3 , T. Coelho 3 ;<br />

1 ICBAS (Instituto Ciências Biomédicas Abel Salazar), U.P., Porto, Portugal,<br />

2 IBMC (Instituto Biologia Molecular e Celular), U.P, Porto, Portugal, 3 Unidade<br />

Clínica de Paramiloidose, HGSA (Hospital Geral Santo Antonio), Porto, Portugal.<br />

Andrade first described FAP (1952) as a disease occurring between<br />

25 and 35 yrs . He reported 64 patients, 13 <strong>of</strong> which had no family<br />

history <strong>of</strong> the disease . Later PE Becker established its AD mode <strong>of</strong><br />

inheritance and interpreted isolated cases not as a de novo mutation<br />

but as the expression <strong>of</strong> incomplete penetrance <strong>of</strong> the gene in one <strong>of</strong><br />

the parents. This hypothesis could only be tested after the finding <strong>of</strong><br />

the mutation in 1985 .<br />

Our aims were: 1) to estimate the number <strong>of</strong> probands with no affected<br />

parent at time <strong>of</strong> diagnosis; 2) to study age at onset <strong>of</strong> proband and its<br />

changes over time . Between 1939 and 2005, 2075 patients (525 families)<br />

were diagnosed at HGSA. Families were classified as “new” when<br />

the proband reported no similar disease in earlier generations .<br />

Age-at-onset varied from 20-80 yrs (mean 37 .1 in women, 32 .4 in<br />

men) . 209 probands (40%) had no affected parent at time <strong>of</strong> diagnosis<br />

. This type <strong>of</strong> family represented 68% <strong>of</strong> those diagnosed in last<br />

decade (only 27% before 1985) . Mean age-at-onset <strong>of</strong> probands <strong>of</strong><br />

“new” families was 46 .0 yrs (vs. 32 .3 yrs for “classical” families) and it<br />

has increased over time, being 49 .5 yrs in last decade .<br />

Regarding FAP two realities coexist in Portugal: families with several<br />

generations <strong>of</strong> affected (where probands have “classical” onset) and<br />

probands with late-onset who report no similar disease in previous<br />

generations . The mutation may cross generations without clinical manifestations,<br />

then expresses as late-onset and later anticipation occurs .<br />

P07.010<br />

the ß 2 -adrenergic receptor gene polymorphism and arterial<br />

hypertension in children<br />

S. V. Kuzmina 1 , M. A. Bogdanova 2 , O. S. Romashkina 2 , O. A. Mutafyan 1 , V. I.<br />

Larionova 2 ;<br />

1 St.Petersburg State Medical Academy <strong>of</strong> Postgraduate Studies, Saint-Petersburg,<br />

Russian Federation, 2 St.Petersburg State Pediatric Medical Academy,<br />

Saint-Petersburg, Russian Federation.<br />

The ß 2 -adrenergic receptor (ADRB2) is thought to be associated with<br />

arterial hypertension (AH) and its altered function can results in increased<br />

blood pressure (BP) . Q/E27 polymorphism <strong>of</strong> ADRB2 gene is<br />

considered functionally important .<br />

Though some reports indicate that polymorphism in the ADRB2gene<br />

is associated with essential hypertension, its role in BP levels remains<br />

unclear .<br />

The aim <strong>of</strong> this study were to investigate distribution <strong>of</strong> ADRB2 genotypes<br />

and allele frequencies <strong>of</strong> Q/E27 polymorphism in hypertensive<br />

and normotensive children and to compare clinical systolic BP levels<br />

between carriers <strong>of</strong> the different genotypes .<br />

84 children with systolic AH (aged 7-17) and 90 normotensive children<br />

(aged 7-17) were include the study .<br />

Arterial hypertension was defined as systolic/diastolic blood pressure<br />

measurements higher than 95 age-gender-height percentile <strong>of</strong> the adopted<br />

reference values .<br />

DNA was extracted from blood samples according to standard protocols<br />

. The Q/E27 polymorphism was genotyped by using the PCR<br />

restriction fragment length polymorphism analysis .<br />

The distribution <strong>of</strong> ADRB2 genotypes and allele frequencies did not<br />

differ significantly between patients with AH and control subjects.<br />

Clinical systolic BP in patients with QQ- genotype was 133,65±11,5<br />

mm Hg, QE-genotype was 133,43±8,4 mm Hg, EE- genotype was<br />

132,52±7,5 mm Hg . Clinical systolic BP differences among genotypes<br />

were not found .<br />

The allelic and genotypic frequencies <strong>of</strong> the Q/E27 polymorphism in<br />

hypertensive and control subject<br />

Q/E27 Hypertensive (n=84) Control (n=90) p<br />

QQ 17 (20,2%) 14 (15,6%) 0,722<br />

QE 46 (54,8%) 52 (57,8%)<br />

EE 21 (25,0%) 24 (26,7%)<br />

Q 80 (47,6%) 80 (44,4%) 0,5527<br />

E 88 (52,4%) 100 (55,6%)<br />

P07.011<br />

iL4 genetic polymorphisms contribution to madeira population<br />

risk <strong>of</strong> asthma<br />

A. G. Berenguer1 , R. Câmara2 , A. T. G. Fernandes1 , S. Oliveira2 , A. Brehm1 ;<br />

1 2 <strong>Human</strong> <strong>Genetics</strong> Laboratory, Funchal, Portugal, Imunoallergology Unit, Central<br />

Hospital <strong>of</strong> Funchal, Funchal, Portugal.<br />

The allergic disease prevalence is influenced by both environmental<br />

exposure and the population’s genetic predisposition to the disease .<br />

Five different polymorphisms <strong>of</strong> previously associated genes to some<br />

<strong>of</strong> asthma’s phenotypic characteristics namely IL4RP2 and IL4-590<br />

(C/T) at 5q31-32; ADRB2 16A/G at 5q31-32; ADAM33 S1 (G/A) and<br />

ADAM33 V4 (C/G) at 20p13 were studied in 28 asthmatic children<br />

with positive skin prick test to house dust mite from affected sib-pair<br />

families composed by two children and their biological parents . Allele<br />

frequencies from asthmatic patients were then compared to a sample<br />

from Madeira general population . Both genotypic and allelic frequencies<br />

as well as comparisons between both groups were accessed by<br />

ARLEQUIN 3 .1 .<br />

We have found significant differences regarding both IL4RP2 and IL4-<br />

590 (C/T) polymorphisms between the two groups (p

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