Zbornik - Društvo genetičara Srbije
Zbornik - Društvo genetičara Srbije
Zbornik - Društvo genetičara Srbije
Create successful ePaper yourself
Turn your PDF publications into a flip-book with our unique Google optimized e-Paper software.
48 ZBORNIK ABSTRAKATA III KONGRESA GENETIÈARA SRBIJE II-Usm-1<br />
Subotica, 30. novembar - 4. decembar 2004.<br />
ANALIZA SASTAVA MIKROBIOLOŠKIH ZAJEDNICA RIZOSFERA<br />
Ramonda nathaliae I Ramonda serbica<br />
Ivana Bratiæ, M. Saviæ, Lidija Ðokiæ i Branka Vasiljeviæ<br />
Institut za molekularnu genetiku i genetièko inenjerstvo, Beograd<br />
Ramonda nathaliae i Ramonda serbica su tercijalni relikti i endemiti Balkanskog<br />
poluostrva koji rastu u pukotinama stena na strmim kreènjaèkim liticama u Siæevaèkoj<br />
klisuri (Srbija). Cilj ovog rada je bio da se utvrdi sastav mikrobioloških zajednica<br />
rizosfera R. nathalia i R. serbica metodama PCR (reakcija lanèane polimerizacije) i<br />
RFLP (polimorfizam duina restrikcionih fragmenata). Za PCR metodu je korišæen<br />
univerzalni par prajmera koji selektivno amplifikuje fragment bakterijskog 16S rRNA<br />
gena. PCR fragmenti (duine oko 1300bp) su dobijeni iz ukupne DNA izolovane iz<br />
rizosfera R. serbica i R. nathaliae. PCR produkti su potom klonirani u pUC19 vektor i<br />
restrikciono analizirani pomoæu RsaI enzima. Restrikcioni profili su potvrdili prisustvo<br />
89 razlièitih operativnih taksonomskih jedinica (OTJ) poreklom iz rizosfere R. nathaliae,<br />
a samo 13 razlièitih OTJ poreklom iz rizosfere R. serbica.<br />
STUDY OF MICROBIAL COMMUNITY COMPOSITION FROM<br />
RHIZOSPHERE SOILS OF Ramonda nathaliae AND Ramonda serbica<br />
Ramonda nathaliae i Ramonda serbica, the Tertiary relict and the endemic species of the<br />
Balkan, grow in the rock fissures on steep limestone cliffs of the Sicevo gorge (Serbia).<br />
The aim of this study was to analyse microbial community composition of rhizosphere<br />
soils of R. nathaliae and R. serbica by PCR (polymerase chain reaction) and RFLP (restriction<br />
fragment length polymorfism) methods. A universal primer pair for PCR was<br />
designed to selectively amplify a fragment of bacterial 16S rRNA gene. PCR fragments<br />
(approximately 1300 bp) were amplified from total DNA that was isolated from<br />
rhizosphere soils of R. serbica and R. nathaliae. PCR products were cloned into pUC19<br />
plasmid and clones were subjected to restriction analysis employing restriction enzyme<br />
RsaI. Restriction profiles indicated the presence of 89 different operative taxonomic units<br />
(OTU) in the rhizosphere soil of R. nathalia, but only 13 different OTUs from the<br />
rhizosphere soil of R. serbica.