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Docteur de l'université Automatic Segmentation and Shape Analysis ...

Docteur de l'université Automatic Segmentation and Shape Analysis ...

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Chapter 4 Statistical shape mo<strong>de</strong>l of Hippocampus 75<br />

In or<strong>de</strong>r to calculate the position f(θ, φ) for an arbitrary pair parameters (θ, φ),<br />

we first locate the parameters on the unit sphere, where<br />

r(θ, φ) = (sin θ cos φ, sin θ sin φ, cos θ) T , (4.9)<br />

is contained insi<strong>de</strong> the triangle with vertices<br />

r1 = (sin θ(vi1) cos φ(vi1), sin θ(vi1) sin φ(vi1), cos θ(vi1)) T ,<br />

r2 = (sin θ(vi2) cos φ(vi2), sin θ(vi2) sin φ(vi2), cos θ(vi2)) T ,<br />

r3 = (sin θ(vi3) cos φ(vi3), sin θ(vi3) sin φ(vi3), cos θ(vi3)) T .<br />

The barycentric coordinate<br />

for r can be calculated, such that<br />

(4.10)<br />

(w1, w2, w3), ∀i = 1, 2, 3 : 0 ≤ wi ≤ 1 (4.11)<br />

w1r1 + w2r2 + w3r3 = r. (4.12)<br />

The corresponding position for (θ, φ) can be obtained by a linear interpolation<br />

4.1.1.1 Initial parameterization by diffusion<br />

f(θ, φ) = w1p vi 1 + w2p vi 2 + w3p vi 3<br />

(4.13)<br />

Given the mesh representation for the input X of k vertices, two of the vertices<br />

vnorth, vsouth are selected as the north pole <strong>and</strong> the south pole<br />

θ(vnorth) = 0, (4.14)<br />

θ(vsouth) = π (4.15)<br />

which is used as Dirichlet condition of the Lapacian equation ∇ 2 θ = 0. The<br />

PDE is approximated on the mesh X by a linear system Aθ = b, where A is

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