166 BIBLIOGRAPHY Kendall, D. G. (1977). The diffusion of shape. Advances in Applied Probability, 9(3):428–430. 2.2 Kendall, D. G. (1984). <strong>Shape</strong> manifolds, procrustean metrics, <strong>and</strong> complex pro- jective spaces. Bulletin of the London Mathematical Society, 16(2):81 –121. 2.2, 5.2 Kendall, D. G. (1989). A survey of the statistical theory of shape. Statistical Science, 4(2):87–99. 2.2 Kendall, D. G., Bar<strong>de</strong>n, D., Carne, T. K., <strong>and</strong> Le, H. (1999). <strong>Shape</strong> <strong>and</strong> shape theory. Wiley, New York. 2.2, 2.2 Khan, A. R., Cherbuin, N., Wen, W., Anstey, K. J., Sach<strong>de</strong>v, P., <strong>and</strong> Beg, M. F. (2011). Optimal weights for local multi-atlas fusion using supervised learning <strong>and</strong> dynamic information (SuperDyn): validation on hippocampus segmenta- tion. NeuroImage, 56(1):126–139. 2.1.2.3 Khan, A. R., Wang, L., <strong>and</strong> Beg, M. F. (2008). FreeSurfer-initiated fully- automated subcortical brain segmentation in MRI using large <strong>de</strong>formation dif- feomorphic metric mapping. NeuroImage, 41(3):735–746. 2.1.2.3 Klemencic, J., Pluim, J., Viergever, M., Schnack, H., <strong>and</strong> Valencic, V. (2004). Non-rigid registration based active appearance mo<strong>de</strong>ls for 3D medical image seg- mentation. Journal of Imaging Science <strong>and</strong> Technology, 48(2):166–171. 2.1.2.3 Kloppel, S., Stonnington, C. M., Chu, C., Draganski, B., Scahill, R. I., Rohrer, J. D., Fox, N. C., Jack, C. R., Ashburner, J., <strong>and</strong> Frackowiak, R. S. J. (2008). <strong>Automatic</strong> classification of MR scans in Alzheimer’s disease. Brain, 131(3):681–689. 5.3 Kolmogorov, V. <strong>and</strong> Zabin, R. (2004). What energy functions can be minimized via graph cuts? IEEE Transactions on Pattern <strong>Analysis</strong> <strong>and</strong> Machine Intelligence, 26(2):147–159. 2.1.2.3
BIBLIOGRAPHY 167 Konrad, C., Ukas, T., Nebel, C., Arolt, V., Toga, A., <strong>and</strong> Narr, K. (2009). Defining the human hippocampus in cerebral magnetic resonance images–An overview of current segmentation protocols. NeuroImage, 47(4):1185–1195. 2.1.1 Korf, E. S. C., Wahlund, L., Visser, P. J., <strong>and</strong> Scheltens, P. (2004). Medial temporal lobe atrophy on MRI predicts <strong>de</strong>mentia in patients with mild cognitive impairment. Neurology, 63(1):94 –100. 1.1.3.2 Kotcheff, A. C. <strong>and</strong> Taylor, C. J. (1998). <strong>Automatic</strong> construction of eigenshape mo<strong>de</strong>ls by direct optimization. Medical Image <strong>Analysis</strong>, 2(4):303–314. 2.2.3 Kovacevic, S., Rafii, M. S., <strong>and</strong> Brewer, J. B. (2009). High-throughput, fully automated volumetry for prediction of MMSE <strong>and</strong> CDR <strong>de</strong>cline in mild cognitive impairment. Alzheimer Disease & Associated Disor<strong>de</strong>rs, 23(2):139–145. 1.1.3.2 Kraepelin, E. (1910). Psychiatrie: ein Lehrbuch für Studieren<strong>de</strong> und Ärzte. Barth, Leipzig. 1.1.1 La Joie, R., Fouquet, M., Mézenge, F., Lan<strong>de</strong>au, B., Villain, N., Mevel, K., Pélerin, A., Eustache, F., Desgranges, B., <strong>and</strong> Chételat, G. (2010). Differential effect of age on hippocampal subfields assessed using a new high-resolution 3T MR sequence. NeuroImage, 53(2):506–514. 5.6.2, 5.6.2, 5.13 Laga, H., Takahashi, H., <strong>and</strong> Nakajima, M. (2006). Spherical wavelet <strong>de</strong>scriptors for content-based 3D mo<strong>de</strong>l retrieval. In IEEE International Conference on <strong>Shape</strong> Mo<strong>de</strong>ling <strong>and</strong> Applications, 2006. SMI 2006, pages 15–15. IEEE. 2.2.1 Larsen, R., Eiriksson, H., <strong>and</strong> Stegmann, M. B. (2001). Q-MAF shape <strong>de</strong>composi- tion. In Niessen, W. J. <strong>and</strong> Viergever, M. A., editors, Medical Image Computing <strong>and</strong> Computer-Assisted Intervention – MICCAI 2001, volume 2208 of LNCS, pages 837–844, Berlin, Hei<strong>de</strong>lberg. Springer Berlin Hei<strong>de</strong>lberg. 2.2.2 Leff, H. S. <strong>and</strong> Rex, A. F. (1990). Resource letter MD-1: Maxwell’s <strong>de</strong>mon. American Journal of Physics, 58(3):201. 1
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