Sample A: Cover Page of Thesis, Project, or Dissertation Proposal

cur, conn=UpdateWorkReg(cur, conn, 'Intersect_'+k, exp,
'Intersect_'+k, usr, k+'_sr'+str(rgr), 'statistical_filter', notes+i)
desc=['probeset_id','pm_mm_other','x','y','probe_index','SRIs']
fp.write('\nCreated Table:\tIntersect_'+k+'\n')
fp=UpdateOntology3(usr, pswd, db, desc, exp,
'Intersect_'+k, 'Intersect_'+k, notes+i, 'statistical rigor not
enforced', fp)
conn.close()
fp.close()
# Intersect all two class datasets
def ModelIntersect(usr, pswd, db, logfile, gt=4):
cur, conn= make_connect(usr, pswd, db)
states=get_unique_states(cur)
vals=['probe_index', 'x', 'y', 'pm_mm_other']
exp=get_exp(usr, pswd, db)
notes='intersection of '
fp=open(logfile, 'a')
for i in range(len(states)-1):
class1=states[i]
pt=find(class1,' ')
if pt>0:
class1=states[i][:pt]+states[i][pt+1:]
msk1, Lmsk1, state1, cel1=get_inc_state(cur, states[i])
tmp1='create table temp1 as select
intersect_'+class1+'.probeset_id'
for k in vals:
tmp1=tmp1+ ', intersect_'+class1+'.'+k
for k in msk1:
tmp1=tmp1+ ', intersect_'+class1+'.'+k+' as '+k
for j in range(i+1, len(states)):
tmp=tmp1
class2=states[j]
pt=find(class2,' ')
if pt>0:
class2=states[j][:pt]+states[j][pt+1:]
msk2, Lmsk2, state2, cel2=get_inc_state(cur,
states[j])
for k in msk2:
tmp=tmp+ ', intersect_'+class2+'.'+k+' as '+k
tmp=tmp+' where intersect_'+class1+'.x =
intersect_'+class2+'.x and intersect_'+class1+'.y =
intersect_'+class2+'.y '
tmp=tmp+ 'order by intersect_'+class1+'.probeset_id,
intersect_'+class1+'.probe_index'
cur.execute(tmp)
conn.commit()
#print '\n\n', tmp, '\n\n'
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