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Sample A: Cover Page of Thesis, Project, or Dissertation Proposal

Sample A: Cover Page of Thesis, Project, or Dissertation Proposal

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Chapter 5: Data Mining the Multiclass Dataset<br />

Lung cancer is the most prominent f<strong>or</strong>m <strong>of</strong> cancer w<strong>or</strong>ldwide, representing 12.3% <strong>of</strong> all cancer<br />

diagnoses [1]. It is a devastating disease, f<strong>or</strong> 90% <strong>of</strong> those diagnosed with lung cancer will<br />

eventually succumb to it, representing 17.8% <strong>of</strong> cancer deaths w<strong>or</strong>ldwide. Smoking tobacco is<br />

strongly c<strong>or</strong>related to the development <strong>of</strong> lung cancer, with 80-90% <strong>of</strong> all diagnoses being<br />

attributed to smokers, although only 11% <strong>of</strong> cigarette smokers will develop lung cancer [1].<br />

There exist four histologically distinct lung cancer variants: 3 are <strong>of</strong> non small cell lung cancer<br />

(NSCLC), and the other is small cell lung cancer (SMLC) [1]. NSMLC is the predominant f<strong>or</strong>m<br />

<strong>of</strong> lung cancer, encompassing 80% <strong>of</strong> all lung cancer cases [2]. Adenocarcinoma has surpassed<br />

squamous cell carcinoma in prevalence; both are subtypes <strong>of</strong> NSCLC, the most frequent subtype<br />

<strong>of</strong> lung cancer [1, 2]. Alarmingly, adenocarcinoma is most common in women, non-smokers, and<br />

the young [1, 2]. Adenocarcinomas are peripherally located in the lungs and develop from clara<br />

cells, alveoli, and mucin producing cells. Squamous carcinomas arise in the central airways and<br />

are the direct result <strong>of</strong> smoking, as there are no squamous epithelial cells in n<strong>or</strong>mal lungs.<br />

Surgical intervention f<strong>or</strong> patients without mediastinal involvement still results in only a 30-50%<br />

chance <strong>of</strong> disease-free survival, with long-term survival greatly reduced f<strong>or</strong> patients with<br />

mediastinal involvement [1].<br />

We have separated the samples from the Bhattacharjee dataset into several subsets, in <strong>or</strong>der to<br />

produce a NSCLC multiclass dataset consisting <strong>of</strong> adenocarcinomas, squamous cell carcinomas,<br />

and n<strong>or</strong>mal (actually adjacent) biopsies. There exist 155 samples which survived the BaFL<br />

114

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