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Biochemical activity of bacteria

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<strong>Biochemical</strong> <strong>activity</strong> <strong>of</strong> <strong>bacteria</strong><br />

Arash Ravandi<br />

Carbohydrate metabolism and<br />

terminal oxidation


• All <strong>bacteria</strong> utilize energy sources to produce<br />

ATP.<br />

• Source <strong>of</strong> energy for <strong>bacteria</strong>:<br />

C: from sugar and lipid → energy &<br />

biosynthesis<br />

N: from protein → biosynthesis<br />

O: from air →energy<br />

• Heterophilic <strong>bacteria</strong> use carbohydrate as<br />

energy source, they use enzymes to utilize<br />

simple sugars like glucose and<br />

monosaccharides


• Major carbohydrate metabolism pathway:<br />

• 1.Embden-meyerh<strong>of</strong>-parnas (EMP)<br />

glycolysis<br />

• 2.Entner-Doudor<strong>of</strong>f (ED)<br />

• 3.Penthose phosphate (PP)<br />

• 4.Kreb´s cycle


• Each <strong>bacteria</strong> has it´s own collection <strong>of</strong><br />

enzymes<br />

this is useful to identify <strong>bacteria</strong>l species by<br />

checking products from the oxidation and<br />

fermentation <strong>of</strong> these carbohydrates.<br />

fermentation kit


Detection:<br />

• PH indicator: to detect metabolic acids<br />

that produce by <strong>bacteria</strong> after oxidation<br />

and fermentation <strong>of</strong> sugars. Example:<br />

Phenol red<br />

• Reagent: after <strong>bacteria</strong> have grown it<br />

reacts with specific byproduct or<br />

intermediates in the metabolic pathway.<br />

• Gas production, Example: Durham tubes


Durham tube PH indicator


• Metabolic <strong>activity</strong> test:<br />

ATP assay: measure ATP by luciferase<br />

system

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