pdf - A test of psbK-psbI and atpF-atpH as potential plant DNA - ArBOL

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Nature Precedings : hdl:10101/npre.2008.1896.1 : Posted 16 May 2008 matK trnH- atpF- psbK- 4 loci matK+ matK+atpF- matK+psbK- matK+ matK+ psbA atpH psbI trnHpsbA 12 atpH+trnHpsbA psbI+trnHpsbA atpFatpH matK+psbKpsbI+psbKpsbI atpF-atpH Mean of all interspecific distances 0.0134 0.0255 0.0345 0.0106 0.0172 0.0175 0.0189 0.0157 0.0168 0.0118 0.0150 St. deviation +/- 0.0127 0.0227 0.0665 0.0096 0.0151 0.0154 0.0180 0.0121 0.0201 0.0092 0.0159 Mean of all intraspecific distances 0.0012 0.0017 0.0004 0.0005 0.0009 0.0012 0.0009 0.0011 0.0007 0.0009 0.0007 St. deviation +/- 0.0040 0.0041 0.0015 0.0012 0.0015 0.0026 0.0017 0.0021 0.0020 0.0026 0.0016 Mean Theta 0.0012 0.0015 0.0007 0.0005 0.0008 0.0012 0.0009 0.0010 0.0007 0.0009 0.0007 St. deviation +/- 0.0037 0.0032 0.0023 0.0010 0.0013 0.0023 0.0015 0.0018 0.0018 0.0024 0.0015 Mean coalescent depth 0.0017 0.0023 0.0008 0.0008 0.0013 0.0017 0.0014 0.0016 0.0012 0.0013 0.0011 St. deviation +/- 0.0050 0.0047 0.0023 0.0016 0.0018 0.0032 0.0021 0.0026 0.0026 0.0033 0.0021 Number of measurements for all intraspecific distances 93 90 84 91 95 95 95 95 95 95 95 Number of measurements for all interspecific distances 200 194 168 194 206 206 206 206 206 206 206 Table 3. Measures of inter- and intra-specific K2P distances for four potential barcodes and different combinations applied to a selective sampling from the KNP.
Nature Precedings : hdl:10101/npre.2008.1896.1 : Posted 16 May 2008 matK vs trnH-psbA Wilcoxon Signed-Ranks Test – Interspecific pair-distances W+ = 1462, W- = 14648, N = 179, p
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