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Citrullus lanatus (Thunb.) Matsum. & Nakai - Cucurbit Breeding ...

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number of amplification reactions needed and allowed an initial screen of polymorphic markers for linkage<br />

analysis. Once polymorphic markers were identified among the DNA bulks, they could be used for a mapping<br />

experiment on the entire segregating populations, thus increasing the chances of finding linked markers for the<br />

trait of interest with fewer reactions. Even though this technique was developed for RFLP markers, it can be<br />

easily adapted to any molecular marker.<br />

The objective of this study was to optimize methodologies and protocols for the identification of<br />

molecular markers linked to resistance to gummy stem blight in watermelon. In addition, we tested 355 primers<br />

(176 SSR, 15 ISSR, 68 EST-based, and 96 RAPD) for polymorphism among the resistant and susceptible<br />

parents of our F 2 populations, segregating for resistance to gummy stem blight. We used BSA to identify<br />

candidate molecular markers linked to resistance, and mapped them on our F 2 populations.<br />

Materials and Methods<br />

Germplasm and Crosses<br />

In the experiment, we used two families developed from the two crosses PI 189225 × 'NH Midget' and<br />

PI 482283 × 'NH Midget'. PI 189225 and PI 482283 (resistant parents) were C. <strong>lanatus</strong> var. citroides. 'NH<br />

Midget' (susceptible parent) was C. <strong>lanatus</strong> var. <strong>lanatus</strong>.<br />

'NH Midget' was obtained from commercial seed stocks and the plant introduction (PI) accessions<br />

were obtained from the Southern Regional Plant Introduction Station at Griffin, Georgia. For each family, we<br />

developed four generations (P aS 1, P bS 1, F 1, F 2, F 3) in the greenhouses at North Carolina State University in<br />

Raleigh, North Carolina.<br />

Inoculum Preparation<br />

Originally, the isolate of D. bryoniae was obtained from diseased cucumber tissues harvested from<br />

naturally-infected plants in Charleston, South Carolina in 1998. In the fall of 2001, we reisolated the strains of<br />

D. bryoniae from watermelon plants that were artificially inoculated with the isolates in our greenhouses using<br />

the technique described here. Pycnidia were identified with a dissecting microscope (20×) and transferred to<br />

Petri plates containing potato dextrose agar (PDA) (25 ml/Petri plate). Isolates were selected from the first<br />

133

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