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2.1.8.2. Absorbency Under Load (AUL) - BADA

2.1.8.2. Absorbency Under Load (AUL) - BADA

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2- Side chains of polar residues with positive or negative charges, such as Arginine, Lysine,<br />

Aspartic acid and Glutamic acid are usually on the surface of the protein in contact with the<br />

aqueous solvent.<br />

3- Uncharged polar side chains, such as Serine, Threonine, Aspargine, Glutamine, Tyrosine and<br />

Tryptophan are frequently located on the surface, but some of this are found in the interior as<br />

well as they are found in the interior, they are practically hydrogen bonded to other similar<br />

residues. In fact, hydrogen bonding helps neutralize the polarity of these groups [18] .<br />

Table 1. 22 Polar and non-polar amino acids found in proteins [18]<br />

Structure of R Amino Acid Abbreviations<br />

─H<br />

─CH3<br />

─CH(CH3) 2<br />

─CH2CH (CH3) 2<br />

─CH2CH (CH3) 2<br />

│<br />

CH3<br />

─CH2CO NH 2<br />

─CH2CH2CO NH 2 Glutamine Gln<br />

…………………………………………………..7<br />

Side chain<br />

polarity<br />

Side chain<br />

charge (pH 7)<br />

Glycine Gly nonpolar neutral<br />

Alanine Ala nonpolar neutral<br />

Valine Val nonpolar neutral<br />

Leucine Leu nonpolar neutral<br />

Isoleucine Ile nonpolar neutral<br />

Phenylalanine Phe nonpolar neutral<br />

Asparagine Asn polar neutral<br />

polar negative

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