Genomics - VWR International
Genomics - VWR International
Genomics - VWR International
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<strong>Genomics</strong><br />
Eppendorf Mastercycler®<br />
Fast qPCR with realplex 4<br />
Proteomics<br />
See page 3<br />
Pall AcroPrep Advanced<br />
Filter Plates for Ultrafiltration<br />
Microbiology<br />
AES CHEMUNEX<br />
Masterclave ® Series<br />
Cell Biology<br />
Lonza StellARay<br />
qPCR Arrays<br />
See page 23<br />
See page 27<br />
See page 33<br />
Featured in this issue:<br />
See Great Promotions Inside!<br />
MAGAZINE<br />
Volume 12 Issue 25<br />
Impacting<br />
DNA Research
Contents<br />
Life Science Magazine Volume 12 • Issue 25<br />
2-22 <strong>Genomics</strong><br />
2-4 Reproducible High-Throughput Probe-Based qPCR<br />
5 illustra triplePrep Kit<br />
5 E.Z.N.A. HP Total RNA Kits<br />
5 PCR taq Polymerase<br />
6-7 Hi-Res Melting ® for Mutation Scanning Using LCGreen ® Plus<br />
8-10 Innovative Thermal Energy Recovery System (TERS ® ):<br />
A Novel Mechanism for Controlling Thermal Cycler Blocks<br />
11-12 Detection and Quantification of MicroRNAs in Human Tissues<br />
13 NIST-Candidate RNA Control Products<br />
13 PCR Workstation with Stainless Steel Work Surface<br />
14-15 Demonstration of FlashGel Recovery with Sheared DNA<br />
16 EvaGreen ® qPCR Dye<br />
16 Kingfisher ® Nucleic Acid Purification Kits<br />
17 illustra GFX PCR DNA and Gel Band Purification Kits<br />
17 PyroScript ® RT-PCR 2X Master Mix<br />
17 Gel/PCR DNA Fragments Kits<br />
18 Gel Imagers<br />
18 Green PCR Reagents<br />
18 UV, Dual UV, and Variable Intensity Transilluminators<br />
19 Multiskan ® GO UV/Vis Spectrophotometer<br />
19 Blocking Solutions, Buffers, and Substrates<br />
20-21 Mouse Genotyping In Less than One Hour<br />
22 Hazard Reducing RNA Kits<br />
22 RNA Purification Dyes and Solutions<br />
22 ExiSpin Combination Vortex/Centrifuge<br />
23-25 Proteomics<br />
23 AcroPrep Advance Filter Plates for Ultrafiltration<br />
23 Enzyme Immunoassay Kits and Peptides<br />
24 Spin-X ® UF Concentrators<br />
24 SuperSignal ® Western Blot Enhancer<br />
25 Kodak BioMax ® Film<br />
25 pH Test Strips and DoubleZone Indicator Papers<br />
26-27 Microbiology<br />
26 UV Crosslinker<br />
26 UV Hand Lamps<br />
26 PolySeed ® for BOD5 Analysis<br />
27 Masterclave ® Series Automated Culture Media Preparators<br />
27 Culture Media and Media Bases<br />
28,33 Cell Biology<br />
28 Antibodies and Conjugates<br />
28 cellgro ® Molecular Biology Grade Water<br />
28 Electroporation Systems<br />
33 StellARray qPCR Arrays<br />
33 jetPRIME DNA and siRNA Transfection Reagents<br />
29-32 Pull-Out Supplement<br />
29-30 <strong>VWR</strong> Life Science Portfolio<br />
31-32 <strong>VWR</strong> Life Science Promotions<br />
2 Life Science Magazine vwr.com 800.932.5000
INTRODUCTION<br />
In contrast to sequence-nonspecific intercalating dyes that<br />
bind indiscriminately to double-stranded DNA (e.g. SYBR ®<br />
Green I), sequence-specific fluorogenic probe chemistries<br />
only quantify the accumulation of specific PCR product.<br />
This improved specificity eliminates the need for post-PCR<br />
melt curve analysis and permits real-time multiplexing.<br />
Common probe chemistries include TaqMan ® , FRET<br />
probes, scorpion probes, and molecular beacons. Standard<br />
probe-based qPCR cycling protocols take between 1 hour<br />
10 minutes and 1 hour 30 minutes, depending on the<br />
ramp rate and data acquisition times of the specific qPCR<br />
instrument used (Figure 1). Faster cycling protocols<br />
(~30 minutes) that do not compromise reaction efficiency<br />
typically require instrumentation with increased thermal<br />
ramp rates, uniform heating across the block, and specially<br />
formulated reagents.<br />
The Eppendorf realplex 4 S real-time PCR system features<br />
a super-fast, Peltier-controlled thermoblock that heats<br />
up at 6°C/sec. and cools down at 4°C/sec., which allows<br />
completion of a 40-cycle qPCR reaction in less than<br />
1 hour. These Peltier units also ensure accurate<br />
temperature control as well as high block homogeneity,<br />
<strong>Genomics</strong><br />
Reproducible High-Throughput Probe-Based qPCR<br />
The Eppendorf Mastercycler ® ep realplex 4 S real-time PCR instrument provides an industry-leading<br />
solution for high-performance, fast qPCR without compromising reaction efficiency and reproducibility.<br />
Figure 1: Total qPCR times for either a standard reaction<br />
protocol (10 minutes at 95°C activation, 40 cycles of 15 seconds<br />
at 95°C, and 60 seconds at 60°C) or a fast protocol (3 minutes at<br />
95°C activation, 40 cycles of 3 seconds at 95°C, and 20 seconds<br />
at 60°C). Reactions were performed on a slow ramp rate qPCR<br />
thermocycler (avg. ramp rate 1°C/sec.) and the fast Eppendorf<br />
realplex 4 S real-time PCR system (6°C/sec. heating and<br />
4°C/sec. cooling).<br />
which are essential to high-quality qPCR reactions. The<br />
optical module comprises an array of 96 LEDs that are<br />
preselected and equalized so that they excite all wells<br />
uniformly. This setup also eliminates the requirement for<br />
ROX reference dye that is used to normalize fluorescent<br />
signals by many conventional qPCR instruments. The<br />
realplex 4 also utilizes the Photo Multiplier Tube (PMT)<br />
for signal detection, which is the most sensitive and<br />
affordable detection technique currently available. In<br />
addition, this four-channel system provides full multiplex<br />
flexibility through emission filters corresponding to<br />
520/550/580/605nm.<br />
METHODS<br />
To demonstrate the ability to perform fast qPCR cycling<br />
without compromising performance, a set of five 10-fold<br />
serial dilutions of human genomic DNA (hgDNA) was<br />
amplified using either a standard or fast cycling protocol.<br />
Amplification of the 74bp hApoB100 amplicon was<br />
performed in full-skirted Eppendorf twin.tec ® plates<br />
with optical clear heat-sealing film using the Eppendorf<br />
realplex 4 S real-time PCR system.<br />
The resulting log amplification plots and standard curves<br />
for reactions performed using the standard protocol<br />
(Figure 2) and fast protocol (Figure 3) indicate that<br />
both the CT and efficiency of the qPCR reactions have<br />
not been compromised as a result of using fast cycling<br />
protocols relative to standard cycling protocols (for a<br />
description of each protocol see Figure 1). The fast<br />
protocol results in a time saving<br />
of 43 minutes relative<br />
to the slow protocol<br />
when performed<br />
on the Eppendorf<br />
realplex 4 S real-time<br />
PCR system.<br />
3
<strong>Genomics</strong><br />
Fluorescence (norm)<br />
Ct [Cycle]<br />
35<br />
30<br />
25<br />
20<br />
0.01 0.1 1.0 10 100 1000<br />
Amount[ng]<br />
Slope: -3.320<br />
Efficiency: 100%<br />
R2 400<br />
: 0.999<br />
0 10 20<br />
Figure 2: Standard cycling protocol (run time = 79 minutes). Data showing<br />
the log amplification plot across a set of five 10-fold serial dilutions of hgDNA<br />
ranging from 200ng to 20pg per reaction, using a standard 2-step cycling<br />
protocol (10 minutes at 95°C activation, 40 cycles of 15 seconds at 95°C, and<br />
one minute at 60°C). 20µL reactions were performed using KAPA PROBE<br />
FAST qPCR Master Mix on the Eppendorf realplex 4 S real-time PCR system.<br />
The data represents 7 replicates for each DNA dilution. The hApoB100<br />
assay targets a 74bp amplicon.<br />
Fluorescence (norm)<br />
40,000<br />
4,000<br />
40,000<br />
4,000<br />
Ct [Cycle]<br />
35<br />
30<br />
25<br />
20<br />
0.01 0.1 1.0 10 100 1000<br />
Amount[ng]<br />
Cycles<br />
Slope: -3.305<br />
Efficiency: 101%<br />
R2 400<br />
: 0.999<br />
0 10 20<br />
Cycles<br />
Figure 3: Fast cycling protocol (run time = 36 minutes). Data showing the<br />
log amplification plot across a set of five 10-fold serial dilutions of hgDNA<br />
ranging from 200ng to 20pg per reaction, using a fast 2-step cycling<br />
protocol (3 minutes at 95°C activation, 40 cycles of 3 seconds at 95°C, and<br />
20 seconds at 60°C). 20µL reactions were performed using KAPA PROBE<br />
FAST qPCR Master Mix on the Eppendorf realplex 4 S real-time PCR system.<br />
The data represents 7 replicates for each DNA dilution. The hApoB100<br />
assay targets a 74bp amplicon.<br />
Reduced running costs, particularly in combination with<br />
increased throughput, are always desirable. To illustrate the<br />
ability to use reduced reagent volumes with comparable<br />
results, three different reaction volumes (5, 10, and 20µL)<br />
were compared using the fast protocol (Figure 4). All three<br />
reaction volumes resulted in highly consistent amplification<br />
across a set of five 10-fold serial dilutions of hgDNA when<br />
cycled using the fast cycling protocol.<br />
Reactions were performed using KAPA PROBE FAST qPCR<br />
MasterMix, specially formulated for high-speed assays. In<br />
conjunction with the benefit of reduced evaporation during<br />
qPCR by using the Eppendorf realplex 4 S real-time PCR<br />
system, comparable results were obtained using low-volume<br />
qPCR reactions.<br />
4 Life Science Magazine vwr.com 800.932.5000<br />
30 40<br />
30 40<br />
Fluorescence (norm)<br />
25,000<br />
2,500<br />
20 µL<br />
10 µL<br />
5 µL<br />
250<br />
0 10 20<br />
Cycles<br />
30 40<br />
Figure 4: Comparison of different qPCR reaction volumes. Similar results<br />
were obtained when either 5, 10, or 20µL reaction volumes were used<br />
in the hApoB100 assay across a set of five 10-fold serial dilutions of hgDNA<br />
ranging from 200ng to 20pg per reaction, using a fast 2-step protocol.<br />
Reactions were performed using KAPA PROBE FAST qPCR Master Mix on<br />
the Eppendorf realplex 4 S real-time PCR system. The data represents a<br />
single reaction at each reaction volume and DNA dilution. The hApoB100<br />
assay targets a 74bp amplicon.<br />
CONCLUSION<br />
High performance, fast qPCR using probe-based chemistries<br />
requires a real-time instrument capable of extremely fast ramp<br />
rates with excellent uniformity across all samples, and a qPCR<br />
reagent formulated for high-speed and sensitivity. The Eppendorf<br />
realplex 4 S real-time PCR system utilizing KAPA PROBE FAST qPCR<br />
Kits provides high-performance, fast qPCR without compromising<br />
reaction efficiency and reproducibility. In addition, the ability<br />
to perform low-volume qPCR can reduce running costs while<br />
maintaining high quality results.<br />
REFERENCE<br />
1. Lawyer, F.C. et al., High-Level Expression, Purification and Enzymatic Characterization of<br />
Full-Length Thermus Aquaticus DNA Polymerase, and a Truncated Form Deficient in 5' to 3'<br />
Exonuclease Activity. PCR Methods Appl. 2, 275-287 (1993).<br />
Realplex 4 Systems Cat. No. Price<br />
2 System (Includes Laptop w/ 97060-540 Ea./ 27,950.00<br />
Aluminum Block & Two Emission Filters)<br />
2S System (Includes Silver Block 97060-544 Ea./ 28,750.00<br />
& Two Emission Filters)<br />
4 System (Includes Aluminum Block 97060-548 Ea./ 33,350.00<br />
& Four Emission Filters)<br />
4S System (Includes Silver Block 97060-552 Ea./ 34,150.00<br />
& Four Emission Filters)<br />
Accessories<br />
twin.tec PCR plate, 96-well Skirted, 47744-116 Cs. 25/ 108.58<br />
Clear<br />
Heat Sealing Film 89167-284 Pk. 100/ 210.15<br />
Heat Sealer 62111-428 Ea./ 2,185.60
illustra <br />
Purify. Amplify. Simplify.<br />
triplePrep <br />
Kit<br />
Purify DNA, RNA, and Protein from the<br />
Exact Same Sample with a Single Kit!<br />
The illustra triplePrep Kit is designed for rapid,<br />
simultaneous extraction and isolation of high<br />
quality genomic DNA (gDNA), total RNA, and<br />
total denatured proteins from animal tissues<br />
and mammalian cells. High yields of DNA, RNA,<br />
and proteins can be extracted in less than one hour using a flexible,<br />
easy-to-follow workflow allowing researchers to directly correlate data<br />
generated from the same sample.<br />
The isolated gDNA, total RNA, and total denatured proteins are suitable<br />
for genomic and proteomic applications such as PCR, restriction enzyme<br />
digestion, sequencing, array CGH, RT-PCR, gene expression microarray,<br />
SDS-PAGE, Western blotting, 2-D DIGE, and LCMS.<br />
• Conserves Precious Sample – Purifies all<br />
three analytes at once from the same, undivided<br />
sample using a single kit/protocol<br />
• Minimizes Sample Prep Variability –<br />
Associated with purifying analytes individually<br />
• Fast – Get from sample to DNA/RNA/protein<br />
in less than one hour – up to 70% time<br />
savings compared to using individual<br />
analyte purification kits/protocols<br />
Description Cat. No. Pack of 50 Preps<br />
triplePrep Kit 95056-354 464.00<br />
E.Z.N.A. HP Total RNA Kits<br />
Remove Genomic DNA Without Enzymes<br />
Provides a rapid and easy method for RNA isolation from a small amount<br />
of cultured eukaryotic cells or tissues. This kit allows single or simultaneous<br />
processing of multiple samples in less than 30 minutes. Normally, 1 x 10 7<br />
eukaryotic cells, or 25-30mg tissue, can be used in a single experiment.<br />
There is no need for phenol/chloroform extractions, and time-consuming steps<br />
such as CsCl gradient ultracentrifugation, and precipitation with<br />
isopropanol or LiCl, are eliminated. RNA purified using the E.Z.N.A. HP Total<br />
RNA method is ready for applications such as RT-PCR, RT-qPCR, Northern<br />
blotting, poly A+ RNA (mRNA) purification, nuclease protection, and<br />
in vitro translation.<br />
Description Preps Cat. No. Price<br />
HP Total RNA Kit 50 101414-850 175.11<br />
HP Total RNA Kit 200 101414-852 582.42<br />
Viral RNA Miniprep Kit 50 101319-254 132.16<br />
Viral RNA Miniprep Kit 200 101319-256 463.71<br />
A Highly Thermostable<br />
DNA Polymerase<br />
<strong>Genomics</strong><br />
Isolated from the thermophile Thermus aquaticus, Taq Polymerase efficiently<br />
catalyzes the 5' to 3' synthesis of DNA. The enzyme has no detectable 3' to 5'<br />
proofreading exonuclease activity, and possesses low 5' to 3' exonuclease<br />
activity. The error rate of G-Biosciences’ Taq Polymerase is low at only<br />
~2.2 x 10 -5 nucleotide -1 cycle -1 . Our Taq Polymerase is highly sensitive<br />
and is able to amplify DNA up to 6Kb from only a single adenine 3' overhang.<br />
The product is supplied with 10X PCR buffer and magnesium chloride.<br />
• 5' to 3' polymerase activity<br />
• Error rate ~2.2 x 10 -5 nucleotide -1 cycle -1<br />
• No detectable 3' to 5' proofreading<br />
exonuclease activity<br />
PCR Taq Polymerase, Size Cat. No. Price<br />
100U 95057-680 42.84<br />
250U 95057-682 193.80<br />
500U 95057-684 166.26<br />
1,000U 95057-686 331.50<br />
Life Science Magazine vwr.com 800.932.5000 5
<strong>Genomics</strong><br />
Hi-Res Melting ®<br />
For Mutation<br />
Scanning Using LCGreen ®<br />
Plus<br />
INTRODUCTION<br />
Idaho Technology began offering Hi-Res Melting (also known as<br />
HRM or HRMA) systems and LCGreen chemistry in 2003. Together<br />
with the University of Utah, specifically Carl Wittwer’s group, we<br />
invented the technology. Screening amplified DNA for sequence<br />
variation, also known as “mutation scanning,” is an important<br />
tool for genetic research and clinical applications. Mutation<br />
scanning techniques detect the presence of sequence variation<br />
in a fragment of amplified DNA. Conventional scanning techniques<br />
are not homogenous and require a separation step to identify<br />
heteroduplexes. The LightScanner ® system is unique in that it<br />
allows homogenous mutation scanning in standard microtiter<br />
format using a dsDNA binding dye, LCGreen Plus, and high<br />
resolution melting.<br />
HI-RES MELTING OVERVIEW<br />
Hi-Res Melting of nucleic acid depends on the ability to<br />
collect high-density information of fluorescence as a function<br />
of temperature in a mixture that contains a fluorescent doublestrand<br />
DNA binding dye and PCR product. Mutations in PCR<br />
products are detected by changes in the shape of the melting<br />
curve compared to a reference sample.<br />
6 Life Science Magazine vwr.com 800.932.5000<br />
LCGREEN<br />
The LightScanner system utilizes the fluorescence of the highest<br />
class of dsDNA binding dye, LCGreen Plus, to identify sequence<br />
variations without the need for dye-labeled probes. LCGreen Plus<br />
dye is specifically designed for Hi-Res Melting curve analysis to<br />
detect DNA sequence variants. It is unique in its ability to detect<br />
the presence of heteroduplexes formed during PCR.<br />
LCGreen Plus is added to the reaction prior to PCR. Supplied at a<br />
10X concentration, simply add one volume of the dye solution for<br />
every nine volumes of the PCR mixture during PCR set up. For<br />
highest reproducibility in many settings, coupled with easiest use,<br />
a complete Hi-Res Melting master mix is available from Idaho<br />
Technology, Inc. (see product info, below). The LightScanner<br />
Master Mix is an optimized PCR master mix, that includes LCGreen<br />
Plus, and was developed specifically for Hi-Res Melting applications.<br />
THE LIGHTSCANNER SYSTEM<br />
The LightScanner system requires no post-PCR addition of reagents<br />
or the need for expensive and time-consuming separation. LCGreen<br />
Plus is included in the amplification reaction. The Hi-Res Melting<br />
profile reveals heterozygous single-base changes in five minutes<br />
with a sensitivity and specificity superior to non-homogenous<br />
techniques, such as DHPLC or TGCE. In addition to identifying<br />
anonymous heterozygous variants, the system enables identification<br />
of specific mutations, in such cases scanning and genotyping can
often be combined into one simple melting analysis. The post-PCR<br />
product remains intact, thus enabling down stream analysis such as<br />
sequencing. New work has shown that somatic mutation sensitivity is<br />
typically higher than Sanger sequencing, with 5-20% mutation levels<br />
readily detectable on the LightScanner in scanning mode using no<br />
other special techniques.<br />
ADDITIONAL INFORMATION<br />
A license is required from Idaho Technology for the manufacturing<br />
and commercial use of LCGreen dyes and/or High-Resolution Melting<br />
(High-Res Melting ® ) technology. For a licensing package, please<br />
contact us directly or send an email to it@idahotech.com.<br />
The purchase of the LightScanner instrument includes a limited,<br />
nontransferable instrument license under specific claims of one<br />
or more U.S. patents as listed on Idaho Technology, Inc.’s Web Site<br />
(http://www.idahotech.com/LegalNotices/), which is owned by the<br />
University of Utah Research Foundation and/or Idaho Technology, Inc.<br />
Any kits sold with this product and/or discussed herein (i) may be<br />
covered by one or more of the U.S. patents, as listed on the Web Site<br />
for the product and (ii) include a limited, nontransferable license to<br />
use the enclosed amount(s) in such kits according to the specified<br />
protocols. Purchase of the LightScanner Master Mix does not convey<br />
any PCR license. The LightScanner Master Mix is licensed under<br />
U.S. Patent Nos. 5,338,671 and 5,587,287. The purchase of the<br />
LightScanner Master Mix and/or the LightScanner instrument includes<br />
a limited, non-transferable license for all fields other than human or<br />
veterinary in vitro diagnostics under U.S. Patent No. 5,871,908, owned<br />
by Evotec Biosystems GmbH and licensed to Roche Diagnostics<br />
GmbH, to use only the enclosed amount of product according to the<br />
specified protocols. No right is conveyed, expressly, by implication,<br />
or by estoppel, to use any instrument or system under any claim<br />
of U.S. Patent No. 5,871,908, other than for the amount of<br />
product contained herein.<br />
LCGreen ® , Hi-Res Melting ® and LightScanner ® are registered trademarks of<br />
Idaho Technology, Inc. SYBR ® is a registered trademark of Molecular Probes, Inc.<br />
<strong>Genomics</strong><br />
REFERENCES<br />
1. Gonzalez-Bosquet J, Calcei J, Wei JS, Garcia-Closas M, Sherman ME, et al. 2011 Detection<br />
of Somatic Mutations by High-Resolution DNA Melt-ing (HRM) Analysis in Multiple<br />
Cancers. (2011). PLoS ONE 6(1): e14522.<br />
2. De Koeyer D, Douglass K, Murphy A, Whitney S, Nolan L, Song Y, De Jong W (2010).<br />
Application of High-Resolution DNA Melting for Genotyping and Variant Scanning of Diploid<br />
and Autotetraploid Potato. Mol Breeding. 25, 67-90.<br />
3. Rolf H.A.M. Vossen, Emmelien Aten, Anja Roos, Johan T. den Dunnen. (2009).<br />
High-Resolution Melting Analysis (HRMA) - More Than Just Sequence Variant Screening<br />
Human Mut. 30, 860-866.<br />
4. Parant JM, George SA, Pryor R, Wittwer CT, Yost HJ. (2009). A Rapid and Efficient Method<br />
of Genotyping Zebrafish Mutants. Dev Dyn. 238,3168-74.<br />
5. van der Stoep N, van Paridon CDM, Janssens T, Krenkova P, Stambergova A, Macek M,<br />
Matthijs G, Bakker E. (2009). Diagnostic Guidelines for High-Resolution Melting Curve<br />
(HRM) Analysis: An Interlaboratory Validation of BRCA1 Mutation Scanning Using the<br />
96-well LightScanner. Human Mut. 30, 899-909.<br />
6. Aten E, White SJ, Kalf ME, Vossen RH, Thygesen HH, Ruivenkamp CA, Kriek M, Breuning<br />
MH, den Dunnen JT.(2008). Methods to Detect CNVs in the Human Genome. Cytogenet<br />
Genome Res. 123, 313-21.<br />
7. Audrezet MP, Dabricot A, Le Marechal C, Ferec C. (2008). Validation of High-Resolution<br />
DNA Melting Analysis for Mutation Scanning of the Cystic Fibrosis Transmembrane<br />
Conductance Regulator (CFTR) Gene. J Mol Diagn. 10, 424-34.<br />
8. C. Voegele, S.V. Tavtigian, D. de Silva, Cuber Thomas, F. Le Calvez-Kelm. (2007).<br />
A Laboratory Information Management System (LIMS) for a High Throughput Genetic<br />
Platform Aimed at Candidate Gene Mutation Screening. Bioinformatics. 23, 2504-2506.<br />
Description Cat. No. Price<br />
LightScanner Instrument, 96-well 89168-794 38,000.00<br />
LightScanner Instrument, 384-well 89168-796 40,000.00<br />
LightScanner 32 qPCR Plus Hi-Res<br />
Melting Apparatus<br />
89168-798 29,500.00<br />
LCGreen Plus Gene Scanning<br />
Reagents Kit, 1,000 rxn<br />
89168-818 115.00<br />
LCGreen Plus Gene Scanning<br />
Reagents Kit, 10,000 rxn<br />
89168-820 900.00<br />
LightScanner Master Mix, 100 rxn 89168-802 120.00<br />
LightScanner Master Mix, 500 rxn 89168-804 375.00<br />
Life Science Magazine vwr.com 800.932.5000 7
<strong>Genomics</strong><br />
Innovative Thermal Energy Recovery System (TERS ®<br />
):<br />
A Novel Mechanism for Controlling Thermal Cycler Blocks<br />
INTRODUCTION<br />
Thermo electric coolers, also known as Peltiers, have long been<br />
used as the mechanism by which instruments such as thermal<br />
cyclers control the temperature of the blocks holding the reaction<br />
vessels. The precise way in which they can be controlled is essential<br />
for specific processes such as PCR. The current trend for rapid<br />
PCR cycling requires even faster heat exchange processes to occur<br />
without compromising the uniformity specification of the block.<br />
In this article we introduce the TERS system of the Techne TC-PLUS<br />
thermal cycler. This technology uses a novel energy saving<br />
mechanism to improve the ramp rates of a standard aluminum<br />
thermal cycler block (Figure 1).<br />
Figure 1: The TC-PLUS thermal cycler with three satellite units. The<br />
TC-PLUS features a color touch screen interface and unique space-saving<br />
stackable design. Up to seven satellite units can be controlled from a<br />
TC-PLUS, or alternatively can be controlled using PC software.<br />
8 Life Science Magazine vwr.com 800.932.5000<br />
RAPID CYCLE PCR<br />
In the modern laboratory, speed is often of the essence, and any<br />
process capable of saving valuable research time is an advantage.<br />
An increasingly popular technique in this direction, with many<br />
recent new products on the market, is that of fast PCR. Rapid cycle<br />
PCR was developed about 20 years ago with the invention of hot<br />
air thermal cyclers 1 . Samples were placed in thin glass capillary<br />
tubes and subjected to cycles of hot and cold air. The rapid heat<br />
transfer meant that PCR products could be amplified in as little<br />
as 15 minutes. More recently, advances in block technology have<br />
seen the introduction of conventional thermal cyclers capable of<br />
temperature ramp rates of up to 15ºC/sec.<br />
RAMP RATES & FAST PCR PROTOCOLS<br />
The factors that determine the length of a PCR run include the<br />
number of steps and cycles (including any initial denaturation/<br />
enzyme activation and final extension steps), the hold times of<br />
these steps, and the ramp rates between them. Ramp rates are<br />
an important part of the PCR as primer annealing and product<br />
extension will occur during these phases. Simply accelerating the<br />
ramp rate for heating and cooling of a PCR run without changing<br />
other program parameters can greatly reduce the total run time<br />
without compromising on sensitivity (Figure 2).<br />
Figure 2: A 231bp fragment of the pBR322 plasmid vector was amplified<br />
in parallel in both TC-PLUS and TC-512 thermal cyclers, which have maximum<br />
heating ramp rates of 5.0ºC/sec. and 3.6ºC/sec. respectively. The numbers<br />
shown are the copies of template added to each 20µL reaction. NTC is a no<br />
template control. For this particular reaction, the results demonstrated no<br />
appreciable differences in yield or sensitivity between the two thermal<br />
cyclers. The program took approximately 1 hour to complete when using<br />
the TC-PLUS compared to 1 hour 30 minutes in the TC-512; saving<br />
approximately 30 minutes on the run time entirely due to the increased<br />
ramp rate of the TC-PLUS.
Fast PCR protocols, on the other hand, rely on greatly reducing<br />
the hold times for denaturation and elongation steps. Without<br />
proper optimization and the use of specifically formulated reagents<br />
that contain specialized enzymes and stabilizers, the reactions can<br />
show a loss of sensitivity and increased variability 2 .<br />
Traditionally, block thermal cyclers have used expensive gold-plated<br />
silver blocks in order to achieve the required rapid ramping speeds<br />
demanded by users. Silver has the highest thermal conductivity of<br />
any metal, but has the tendency to tarnish in air. Gold also has a<br />
high thermal conductivity, but is resistant to oxidative corrosion.<br />
Traditional blocks are made of aluminum, which has only about<br />
half the thermal conductivity of silver and is therefore more limited<br />
in ramp rate. The TERS system developed for the Techne TC-PLUS<br />
thermal cycler uses a unique means of controlling the thermal<br />
energy dissipated by the heat sink in order to offer an improvement<br />
in ramp rates compared to conventional aluminum blocks. The<br />
result is a ramp rate comparable to silver blocks but with better<br />
block uniformity and lower cost.<br />
THERMO ELECTRIC COOLERS (TECS)<br />
TECs, or Peltiers, are semiconductor devices that transfer energy<br />
from one face to the other when a DC current is passed through<br />
them; this phenomenon is known as the Peltier effect. The direction<br />
of energy transfer is reversed when the applied current is reversed.<br />
The face of the device that energy is pumped from is known as the<br />
cold side and the face that energy is transferred to is known as the<br />
hot side (Figure 3).<br />
Any energy dissipated by the TEC is pumped to the hot side of the<br />
device. The amount of energy the TEC can pump from the cold to<br />
hot side, Qc, varies with ΔT; when ΔT ≤0 then the pumped energy<br />
is at its maximum, Qcmax. Qc reduces to zero when ΔTmax is<br />
reached. ΔTmax depends on the quality and type of the TEC.<br />
Thermal cyclers use TECs to control the temperature of the samples<br />
in the well plate of the thermal block. The TEC’s ability to pump<br />
energy allows the samples to be heated and cooled rapidly. A heat<br />
sink is used to dissipate energy and keep the temperature on the<br />
side of the TEC opposite the samples as close to ambient as<br />
possible. Typically the heat sink is force-air cooled using fans.<br />
<strong>Genomics</strong><br />
Figure 3: Definition of some terms relating to operation of a TEC. Qc is the<br />
amount of thermal energy pumped from attached objects e.g. thermal cycler<br />
well plate. ΔT is the difference in temperature between the hot side and the<br />
cold side of the TEC.<br />
THERMAL ENERGY RECOVERY SYSTEM (TERS)<br />
It is desirable to maximize the heating and cooling rate in a<br />
thermal cycler in order to minimize the total time needed for an<br />
experiment. If the temperature profile required is known, or can<br />
be predicted, and it is possible to control the amount of energy<br />
dissipated by the heat sink, the temperature of the heat sink can<br />
be controlled to offer improved ramp rates. In a system using<br />
forced air to cool the heat sink, fan speed can be altered to<br />
change the heat dissipation.<br />
The improvement is gained by reducing the ΔT across the TEC<br />
during temperature transitions of the well plate. As the well plate<br />
is cooled, the energy from the well plate and dissipated electrical<br />
energy is pumped to the heat sink, hence its temperature rises.<br />
By dissipating very little of this energy from the heat sink, the<br />
temperature of the heat sink can be maintained at a desired level.<br />
The heat sink temperature can be chosen to minimize the ΔT<br />
across the TECs when the well plate temperature is next altered.<br />
The reduction in ΔT results in an increased amount of energy<br />
pumped and conducted to the well plate, which in turn gives<br />
a faster ramp rate (Figure 4 on Page 10).<br />
In this way, the heat sink is used as an energy store as well<br />
as a dissipater. The same improvement in ramp rates can be<br />
achieved wherever a TEC is installed and required temperature<br />
changes are known or can be predicted.<br />
Life Science Magazine vwr.com 800.932.5000 9
<strong>Genomics</strong><br />
T<br />
Temp 1<br />
Ambient<br />
COOLING PHASE<br />
Temp 2<br />
The TEC has to switch from<br />
cooling to heating at this point<br />
HEATING PHASE<br />
Temp 3<br />
Time<br />
Time<br />
Time<br />
Top of TEC<br />
(well plate side)<br />
The TEC is cooling until this point so the T<br />
becomes negative when the well plate is heated<br />
Bottom of TEC with<br />
variable heat sink<br />
dissipation (TERS)<br />
Bottom of TEC with<br />
maximum heat<br />
sink dissipation<br />
TEC with maximum<br />
heat sink dissipation<br />
TEC with variable<br />
heat sink dissipation<br />
(TERS)<br />
Figure 4: A sketch illustrating how the varying heat sink energy dissipation<br />
can reduce ΔT and increase ramp rates. After the cooling phase, the fans<br />
are slowed or stopped to hold the heat sink at an elevated temperature.<br />
During the heating phase, the ΔT of the TEC with variable heat sink<br />
dissipation is much lower than that with maximum heat sink dissipation,<br />
resulting in a higher Qc and a faster ramping rate.<br />
ADDITIONAL ADVANTAGES OF TERS<br />
Due to the fact that a portion of the heat energy is conserved in the<br />
heat sink and not dissipated by the fans, and also because the fans<br />
are turned off for short periods of time during each cycle, it can<br />
be surmised that this would amount to significant energy savings<br />
in the running of the thermal cycler. This was tested by running<br />
the TC-PLUS through typical 3-step and 2-step PCR protocols<br />
and measuring the energy consumed per run (Figure 5). It was<br />
found that for a typical 3-step program, almost 15% less energy<br />
was required with variable heat dissipation activated and around<br />
9% less for a 2-step protocol. This would amount to considerable<br />
cost savings over the life of the thermal cycler, especially during<br />
heavy use.<br />
CONCLUSION<br />
The TERS system offers a number of advantages for the TC-PLUS<br />
user, including time-saving rapid ramp rates, lower initial cost of<br />
the aluminum block compared to silver blocks required for other<br />
similar rapid ramping systems, and overall energy savings during a<br />
run. In addition, optimizing reactions with specialized reagents for<br />
fast PCR protocols also leads to shorter run times, increased<br />
throughput, and lower energy costs.<br />
10 Life Science Magazine vwr.com 800.932.5000<br />
Energy consumed (kWh)<br />
0.60<br />
0.50<br />
0.40<br />
0.30<br />
0.20<br />
0.10<br />
0.00<br />
Figure 5: Energy consumed by the TC-PLUS during a thermal cycling<br />
protocol. Typical 3-step and 2-step PCR programs were run on the same<br />
unit with and without the TERS function activated. Each program was run<br />
three times and the energy consumption measured using a plug-in power<br />
and energy monitor. The average energy consumptions for the three runs<br />
are shown.<br />
REFERENCES<br />
1. Wittwer C T & Garling D J. Rapid Cycle DNA Amplification: Time and Temperature<br />
Optimization. Biotechniques 1991; 10(1): 76-83.<br />
2. Hilscher, C, Vahrson, W & Dittmer, D P. Faster Quantitative Real-Time PCR Protocols<br />
May Lose Sensitivity and Show Increased Variability. Nucl. Acids Res. 2005; 33(21): e182.<br />
89130-738<br />
Description Size Cat. No. Price<br />
TC-PLUS, Gradient TERS 96x0.2mL 89130-738 8,735.00<br />
TC-PLUS, Gradient TERS 60x0.5mL 89130-740 8,735.00<br />
TC-PLUS, Gradient TERS 384-well 89130-742 8,735.00<br />
TC-PLUS SAT, Gradient TERS 96x0.2mL 89130-744 6,445.00<br />
TC-PLUS SAT, Gradient TERS 60x0.5mL 89130-746 6,445.00<br />
TC-PLUS SAT, Gradient TERS 384-well 89130-748 6,445.00
Detection and Quantification of MicroRNAs<br />
in Human Tissues<br />
MicroRNAs are small, non-coding RNAs implicated in gene<br />
regulation and many important diseases and biological pathways<br />
including neuronal function, cancer, and heart disease.<br />
Identification of present microRNA sequences and quantification<br />
of the mature microRNAs – also known as miRNAs or miRs – are<br />
important steps in understanding the roles they play and in<br />
validating them as biomarkers or therapeutic targets.<br />
MicroRNA is:<br />
Key to many important biological pathways and diseases<br />
Present in all eukaryotic tissues<br />
Present in different tissues in different configurations and in<br />
varying quantities<br />
Believed to be very rare<br />
ADVANCES IN MICRORNA PROFILING<br />
Many microRNAs have been sequenced and deposited in miRbase,<br />
a public microRNA database (www.mirbase.org). Profiling of<br />
microRNAs in various tissues has been conducted using platforms<br />
including microarrays, sequencing, and quantitative reversetranscriptase<br />
PCR (RT-qPCR). Quanta Biosciences has successfully<br />
profiled microRNAs using RT-qPCR and SYBR Green I detection<br />
on commonly available equipment, and with a broad range<br />
of starting material.<br />
Quanta Biosciences has developed a microRNA quantification<br />
system that includes first-strand synthesis and SYBR Green qPCR<br />
(Figure 1). The qScript microRNA Quantification System may be<br />
used with total RNA or preparations pre-enriched for microRNAs.<br />
Proportional representation of the microRNA sequences is achieved<br />
in the first-strand product over a broad range of template input<br />
as shown in the<br />
example of hsa-miR-1<br />
(Figure 2). This is<br />
critical because<br />
microRNA abundance<br />
can vary greatly<br />
among different<br />
samples or tissues,<br />
and some tissues or<br />
cell types are rare<br />
or precious.<br />
Poly(A) Tailing<br />
cDNA Synthesis<br />
qRT-PCR with<br />
SYBR Green<br />
SuperMix<br />
Relative Fluorescence Units<br />
1,600<br />
1,400<br />
1,200<br />
1,000<br />
800<br />
600<br />
400<br />
200<br />
0<br />
5’<br />
MicroRNA<br />
3’<br />
Poly(A) Polymerase<br />
dNTPs<br />
Reverse<br />
Transcriptase<br />
microRNA Assay Primer<br />
<strong>Genomics</strong><br />
ATP<br />
AAAAAAAAAAAAAAA<br />
AAAAAAAAAAAAAAA<br />
AA<br />
Oligo-dT Adapter Primer<br />
AAAAAAAAAAAAAAA<br />
Figure 1<br />
miR-1 in Heart<br />
Figure 2<br />
Universal PCR<br />
Primer<br />
0 5 10 15 20 25 30 35 40<br />
Number of PCR Cycles<br />
– –– 10.0ng<br />
– –– 1.0ng<br />
– –– 0.1ng<br />
– –– 10.0pg<br />
– –– 1.0pg<br />
– –– 0.1pg<br />
Life Science Magazine vwr.com 800.932.5000 11
<strong>Genomics</strong><br />
Relative Abundance<br />
Relative Abundance of MicroRNAs in Human Tissues<br />
5,000<br />
4,000<br />
3,000<br />
2,000<br />
1,000<br />
0<br />
4,309<br />
miR-1<br />
10 1<br />
Heart Brain Liver<br />
miR-1<br />
1,600<br />
1,200<br />
PROFILE WIDE RANGE OF MICRORNAS FROM ANY SAMPLE<br />
The Universal Primer site incorporated into the cDNA product<br />
enables profiling of any number of different microRNAs from a<br />
single cDNA reaction. The simple SYBR ® Green qPCR approach<br />
requires only a single microRNA-Specific Primer to work in<br />
conjunction with the Universal Primer to form a complete assay<br />
yielding a specific product.<br />
800<br />
400<br />
0<br />
miR-122<br />
1 1<br />
1,488<br />
Heart Brain Liver<br />
miR-122<br />
2,000<br />
9,000<br />
6,000<br />
3,000<br />
0<br />
miR-124<br />
11,086<br />
2 1<br />
Heart Brain Liver<br />
miR-124<br />
3.00<br />
2.50<br />
2.00<br />
1.50<br />
1.00<br />
0.50<br />
0.00<br />
miR-146a<br />
Heart Brain Liver<br />
Contact your <strong>VWR</strong> Life Science Specialist for available<br />
assays, including:<br />
More than 900 human miR assays<br />
More than 300 mouse miR assays<br />
Human and mouse small RNA controls<br />
Description Cat. No. Price<br />
qScript microRNA cDNA Synthesis Kits<br />
25μL rxn 89168-788 200.00<br />
100μL rxn<br />
PerfeCTa SYBR Green SuperMix<br />
89168-790 700.00<br />
100x50μL rxn 101414-150 179.00<br />
500x50μL rxn 101414-152 809.00<br />
2,000x50μL rxn 101414-146 3,013.00<br />
PerfeCTa SYBR Green SuperMix w/ ROX<br />
100x50μL rxn 101414-158 179.00<br />
500x50μL rxn 101414-160 809.00<br />
2,000x50μL rxn 101414-154 3,013.00<br />
PerfeCTa SYBR Green SuperMix w/ Low-ROX<br />
100x50μL rxn 101414-166 179.00<br />
500x50μL rxn 101414-168 809.00<br />
2,000x50μL rxn 101414-162 3,013.00<br />
PerfeCTa SYBR Green SuperMix for iQ<br />
100x50μL rxn 101414-142 179.00<br />
500x50μL rxn 101414-144 809.00<br />
2,000x50μL rxn 101414-138 3,013.00<br />
1.00<br />
1.37<br />
miR-146a<br />
Figure 3, Accurate determination of microRNA expression profiles in human tissues: The relative abundance of individual microRNAs was examined<br />
in different human tissues. For each microRNA, the abundance in each tissue was expressed relative to the tissue with the lowest expression level. cDNA was<br />
prepared using the qScript microRNA cDNA Synthesis Kit and subsequent qPCR reactions performed using PerfeCTa ® microRNA Assays and SYBR ® Green<br />
SuperMix. For each microRNA the Cq (cycle to quantification) value for each tissue was subtracted from the Cq value of the tissue with the lowest Cq value<br />
(ΔCt). Relative abundance was then calculated as 2ΔCt. The relative expression of individual microRNAs in each tissue correlates well with published results<br />
(Liang, Y. et.al. 2007 BMC <strong>Genomics</strong> 8:166).<br />
12 Life Science Magazine vwr.com 800.932.5000<br />
2.4
NIST-Candidate RNA<br />
Control Products<br />
AIBioTech brings the first ever product for NIST Candidate Standard<br />
Reference RNA for next generation technologies to the marketplace.<br />
In partnership with the U.S. National Institute of Standards and Technology<br />
(NIST) and the External RNA Controls Consortium (ERCC), AIBioTech helped<br />
develop 96 Universal RNA standards which can serve as Standard Reference<br />
Material (SRM) for the industry.<br />
NIST-Traceable RNA controls are excellent for performance evaluation of<br />
reproducibility, sensitivity, and robustness in gene expression analysis<br />
or next generation sequencing studies.<br />
Description Cat. No. Each<br />
96 Tubes, 50μL Transcripts 89134-840 1,349.25<br />
Latin Square, 4 Tubes, 100μL Pools of 96 Transcripts 89134-842 2,398.67<br />
Dynamic Range, 4 Tubes, 100μL Transcripts 89134-844 3,598.00<br />
Custom Pool* 89134-846 4,722.38<br />
*Inquire with your <strong>VWR</strong> Life Science Specialist for details – 800.932.5000<br />
<strong>Genomics</strong><br />
PCR Workstation with<br />
Stainless Steel Work Surface<br />
• Stainless steel work surface and a stainless steel ceiling angle reflector are<br />
used for greater UV reflection, resulting in a 10% increase in UV dose in<br />
PCR Workstations with a single UV bulb, and a 20% increase with a dual<br />
UV bulb<br />
• Stainless steel work surface is durable and cleans easily<br />
• Large interior workspace for PCR reaction supplies and equipment<br />
• Single or dual acrylic access panels close during UV irradiation, then slide<br />
into storage compartment in base during experimental procedures<br />
• Hinged glass door allows easy access to interior workspace for cleaning<br />
and placement of large instruments or supplies; Door is made from<br />
tempered safety-glass and blocks UV light<br />
• Accessory table and locking casters transform the PCR Workstation into a<br />
moveable work area that doesn’t infringe on valuable bench-top space<br />
• Single or Dual 254nm UV lamp with convenient switch for timed<br />
decontamination of workspace<br />
• Dual fluorescent lamps<br />
assure excellent work<br />
space visibility<br />
Dimensions<br />
PCR Workstations (DxHxW, in.) Cat. No. Each<br />
Single UV Light* 24x24x30 CBP-030-02-SS 1,646.00<br />
Dual UV Lights* 24x24x30 CBP-030-202-SS 1,708.00<br />
Single UV Light* 24x24x36 CBP-036-02-SS 2,020.00<br />
Dual UV Lights* 24x24x36 CBP-036-202-SS 2,115.00<br />
Single UV Light † 24x24x48 CBP-048-02-SS 2,525.00<br />
Dual UV Lights † 24x24x48 CBP-048-202-SS 2,625.00<br />
PCR Workstation Tables Dimensions<br />
For Use With (Width, in.) (Height, in.) Cat. No. Each<br />
30 28 CBT-030-28 715.44<br />
30 36 CBT-030-36 715.44<br />
36 28 CBT-036-28 746.32<br />
36 36 CBT-036-36 745.30<br />
48 28 CBT-048-28 766.91<br />
48 36 CBT-048-36 766.91<br />
* Single Door † Double Door<br />
Life Science Magazine vwr.com 800.932.5000 13
<strong>Genomics</strong><br />
Demonstration of FlashGel <br />
The sensitivity of the FlashGel System allows for a wide range of<br />
starting material concentrations. As with most gel recovery systems,<br />
the higher the concentration of starting sample, the higher the<br />
recovery yield. Intensity of recovered DNA from FlashGel Cassettes<br />
scales well with load levels of starting DNA, (Figures 1A and 1B).<br />
The FlashGel Recovery System is capable of recovering various size<br />
ranges and various size range windows within the sheared<br />
DNA (Figure 2).<br />
Recovery steps may be performed in parallel lanes to recover<br />
samples from multiple lanes, and multiple samples may be<br />
recovered from a single lane. Simply run the smallest of the desired<br />
size range in to the recovery well, stop the voltage, add FlashGel<br />
Recovery Buffer, and collect the sample. Then continue running the<br />
unwanted DNA through the recovery well, until the next desired size<br />
range reaches the well. Then stop the voltage, add more recovery<br />
buffer, and collect the next sample.<br />
Figure 1A: A dilution series of sheared DNA 600-37.5ng in amount<br />
and approximately 200-4,000bp in size were run on a double-tier 1.2%<br />
FlashGel Recovery Cassette at 275V for four minutes. Lanes QL contain<br />
FlashGel QuantLadder.<br />
14 Life Science Magazine vwr.com 800.932.5000<br />
Recovery with Sheared DNA<br />
More and more molecular biologists are working with sheared DNA. Sheared DNA is critical for constructing genomic libraries, and is utilized<br />
in DNA reassociation and hybridization analysis. Published methods for DNA fragmentation can be classified into four categories: sonication,<br />
enzymatic digestion, hydrodynamic shearing, and nebulization. Regardless of the fractionation method, gel electrophoresis is one of the best<br />
ways to estimate mean size and distribution of the DNA material 1 .<br />
The FlashGel System for Recovery is suitable for separating and recovering DNA, including fragmented DNA 2 . With the recent addition of a<br />
double-tier 2.2% concentration cassette format, it is possible to separate and recover a narrow window within a sheared DNA sample.<br />
DNA may be recovered in as little as five minutes, without the need for UV light or downstream purification.<br />
CAPABILITIES OF THE FLASHGEL SYSTEM FOR RECOVERY OF SHEARED DNA<br />
Sheared DNA on The FlashGel System<br />
Recovered Samples from Sheared DNA<br />
Figure 1B: 4µL aliquot of Figure 1A samples post recovery were run on<br />
a single-tier 1.2% FlashGel Cassette at 275V for five minutes. Lanes QL<br />
contain the FlashGel QuantLadder. Lane C contains 50ng of the original<br />
sheared DNA sample as a reference. Numeric lane labels indicate amount<br />
of starting material correlated from Figure 1A.<br />
Recovered Samples of Various Size Selections<br />
Figure 2: Recovered samples of various size selections from fragmented<br />
genomic lambda DNA. Lanes M contain the FlashGel 100-4,000bp Marker,<br />
Lanes QL contain the FlashGel QuantLadder, Lane C contains 50ng of Sheared<br />
DNA, Lanes 1-5 contain DNA extractions from several experiments taken from<br />
1.2% FlashGel Recovery Cassettes. Samples were run on a single-tier 1.2%<br />
FlashGel Cassette at 275V for seven minutes.<br />
Lane 1: 280-550bp; Lane 2: 650-1,190bp; Lane 3: 425-800bp;<br />
Lane 4: 425-800bp (smaller load volume of lane 3); Lane 5: 800-3,000bp
Sheared DNA Samples Following<br />
Size Selection Recovery<br />
1,500bp<br />
800bp<br />
400bp<br />
250bp<br />
QL 1 2 QL<br />
Figure 3: Lower MW fragments from two sheared<br />
DNA samples were recovered from a double-tier<br />
2.2% FlashGel Recovery Cassette. Several seconds of<br />
275V current were applied after the selected areas<br />
were removed from the samples. The images show<br />
the area where the recovered samples were<br />
removed. Samples of higher molecular weight are<br />
ready to be recovered. Lanes QL contain FlashGel<br />
QuantLadder.<br />
As long as current is applied, DNA that is not recovered will migrate<br />
through the well and leave no trace contamination (Figure 3). Only<br />
when the current is stopped, and the FlashGel Recovery Buffer is<br />
added, will DNA remain in the recovery well. Recovering DNA using<br />
the FlashGel System is highly efficient. Figure 3 shows clear voids<br />
where samples were removed during recovery.<br />
CAPABILITIES OF 1.2% & 2.2% FLASHGEL CASSETTES<br />
Extraction range windows are predefined by selecting and using the<br />
1.2% or the 2.2% Recovery Cassettes. Optimal separation range for<br />
the 1.2% FlashGel Recovery Cassettes is 50-4,000bp, and optimal<br />
separation range for the 2.2% Recovery Cassettes is 10-1,000bp.<br />
The 2.2% cassettes provide a larger spread of bands in the 10-400bp<br />
range, while the 1.2% cassettes show a wider spread in the larger<br />
size range (Figure 4). The 2.2% cassettes will provide a tighter and<br />
more defined range than the 1.2% cassettes within the same size<br />
range (Figure 5). The 1.2% cassettes may be better suited for a<br />
wider size selection range in a single extraction cycle.<br />
SUMMARY<br />
The FlashGel System is an efficient tool for fragmented DNA size<br />
selection. The two recovery cassette concentrations (1.2% and<br />
2.2%) are optimized to provide narrow separation over a wide size<br />
range. With the FlashGel System, DNA fragments may be separated,<br />
recovered, and photographed in as little as five minutes, without<br />
the use of UV light. Recovered samples are immediately ready for<br />
downstream applications– eliminating agarose gel preparation,<br />
band excision, and purification.<br />
Demonstration of<br />
Size Separation<br />
~150bp<br />
100bp 1,500bp<br />
800bp<br />
400bp<br />
250bp<br />
Figure 4: Sheared DNA consisting of fragments<br />
50-3,000bp run on 1.2% and 2.2% FlashGel<br />
Cassettes. Lane QL is FlashGel Quant Ladder,<br />
lane 1 is the DNA.<br />
100bp<br />
<strong>Genomics</strong><br />
Demonstration of<br />
Size Recovery<br />
FlashGel Cassette 2.2% FlashGel Cassette<br />
1.2% 2.2%<br />
QL 1 1 QL QL 1 2 3 4<br />
Figure 5: Lanes labeled 1 and 3 are extraction<br />
of samples through recovery well window from<br />
1.2% and 2.2% cassettes. Lanes 2 and 4 are slightly<br />
higher load volumes of Lanes 1 and 3 respectively.<br />
Lane QL contains the FlashGel QuantLadder.<br />
REFERENCES<br />
1. Ordahl CP, Johnson TR, Caplan AI. (1976). Sheared DNA Fragment Sizing:<br />
Comparison of Techniques. Nucleic Acids Res. 3(11):2985-99.<br />
2. Mary Riley and Hugh White. (2009). FlashGel System for DNA Recovery. ResourceNotes.<br />
6(1): 17-20. White paper available on line: www.lonza.com/go/literature/2212.<br />
3. (2009). FlashGel System - Protocol. Document # 00521123-0209-1.<br />
Available online: www.lonza.com/go/literature/1657.<br />
Description Cat. No. Price<br />
FlashGel Recovery Starter Kit contains:<br />
• FlashGel Recovery Cassettes, 1.2%,<br />
8+1 (18-well), Double Tier (Pk. 9)<br />
95053-314 Ea./ 416.00<br />
• FlashGel Loading Dye (5x1mL, 5X Concentrate)<br />
• FlashGel Recovery Buffer, Ready-to-Use<br />
(2x500μL)<br />
• FlashGel QuantLadder (100bp (3ng) -<br />
1.5kb (30ng) (50 apps, 250μL)<br />
• Visualization Glasses<br />
• Control Fragment<br />
FlashGel Recovery Cassette,<br />
1.2%, 8+1 (18-well), Double Tier<br />
95053-310 Pk. 9/ 105.00<br />
FlashGel Recovery Cassette,<br />
2.2%, 8+1 (18-well), Double Tier<br />
89135-718 Pk. 9/ 105.06<br />
FlashGel Recovery Buffer (2x500μL) 95053-312 Ea./ 134.00<br />
FlashGel System contains:<br />
• FlashGel Dock<br />
• FlashGel Camera<br />
95045-604 Ea./ 1,025.00<br />
• FlashGel DNA Cassettes, 1.2%, 12+1 well, Single Tier (Pk. 9)<br />
• FlashGel Loading Dye and DNA Marker<br />
Life Science Magazine vwr.com 800.932.5000 15
<strong>Genomics</strong><br />
EvaGreen ®<br />
qPCR Dye KingFisher ®<br />
4<br />
3<br />
2<br />
1<br />
Fast EvaGreen ® qPCR Master Mix<br />
Compared to SYBR ® Green qPCR Master Mix from Company A<br />
and Company Q qPCR using 20pg to 200ng Template<br />
● Fast EvaGreen<br />
----- Fast EvaGreen NTC*<br />
---–--- Company A<br />
----- Company A NTC*<br />
---–--- ▲ Company Q<br />
----- Company Q NTC*<br />
*No template control<br />
0<br />
15 20 25 30 35 40<br />
Next-generation DNA dye for quantitative real-time PCR (qPCR) binds DNA<br />
by a novel “release-on-demand” mechanism that allows the use of a high<br />
dye concentration to maximize fluorescence signal while minimizing PCR<br />
inhibition. This allows for superior sensitivity, melt curve analysis, and high<br />
resolution melt curve analysis (HRM)*.<br />
• Does not penetrate cell membranes – no interaction with DNA in live cells<br />
• Non-cytotoxic and non-mutagenic<br />
• Detailed safety report available – contact your <strong>VWR</strong> Life Science Specialist<br />
• Unrivaled melt-curve analysis<br />
Fast Plus EvaGreen Master Mix features Biotium’s chemically modified<br />
Cheetah hot-start Taq polymerase, and is available with or without<br />
Rox reference dye for qPCR.<br />
* Performing HRM may require a<br />
license from Idaho Technologies<br />
Description Qty. Cat. No. Price<br />
Fast Plus EvaGreen qPCR Master Mix, Low Rox (1mL)<br />
Trial Size, 100 rxn 1mL 89139-032 61.80<br />
200 rxn 2x1mL 89139-026 129.78<br />
500 rxn 5x1mL 89139-028 283.25<br />
5,000 rxn 50x1mL 89139-030 2,575.00<br />
Fast Plus EvaGreen qPCR Master Mix, High Rox (1mL)<br />
Trial Size, 100 rxn 1mL 89139-040 61.80<br />
200 rxn 2x1mL 89139-034 128.75<br />
500 rxn 5x1mL 89139-036 283.25<br />
5,000 rxn<br />
EvaGreen Dye (1mL)<br />
50x1mL 89139-038 2,575.00<br />
20X in Water, Trial Size 1mL 89138-984 37.85<br />
20X in Water 5x1mL 89138-982 162.23<br />
16 Life Science Magazine vwr.com 800.932.5000<br />
Nucleic Acid<br />
Purification Kits<br />
Unique High Throughput Workflow<br />
KingFisher Nucleic Acid Purification Kits have been designed and optimized<br />
for use with the Thermo Scientific KingFisher magnetic particle processors,<br />
providing a unique automated workflow. Enabling the fast and accurate<br />
purification of DNA and RNA, the kits contain all relevant buffers and<br />
reagents for a range of different sample types. As a unique, open, and<br />
flexible instrument, the KingFisher system enables users to select a kit that<br />
best meets their specific application demands. As a result, you can employ<br />
a single instrument for a broad range of protocols. Therefore, the KingFisher<br />
Nucleic Acid Purification Kits enable you to create a complete workflow, from<br />
sample preparation to downstream application analysis, from a single source.<br />
• Flexible KingFisher system with optimized purification kits<br />
• Customized kits for wide variety<br />
of sample types<br />
Description<br />
KingFisher Flex Kits, 1x96 Preps<br />
Cat. No. Price<br />
Blood DNA 97060-408 242.11<br />
Cell & Tissue DNA 97060-416 254.24<br />
Plant DNA 97060-422 237.03<br />
Total RNA 97060-412 265.10<br />
Viral Nucleic Acid<br />
KingFisher mL Kits, 60 Preps<br />
97060-420 249.51<br />
Blood DNA 97060-406 237.94<br />
Cell & Tissue DNA 97060-414 245.04<br />
Total RNA 97060-410 255.23<br />
Viral Nucleic Acid 97060-418 188.55
illustra <br />
GFX <br />
PCR DNA<br />
and Gel Band Purification Kits<br />
Designed for the rapid purification and<br />
concentration of PCR products or DNA<br />
fragments. Can be used to purify DNA from<br />
reaction volumes up to 100μL, or agarose<br />
gel slices up to 900mg. Typical recoveries range<br />
from 60 to 80% for DNA fragments from<br />
agarose gel, to as high as 95% for PCR products<br />
from solution; 99.5% of contaminants removed.<br />
• For the isolation and concentration of DNA<br />
fragments (50bp to 10Kb) from PCR mixtures,<br />
DNA-containing agarose gel bands, enzymebased<br />
DNA modifications, and restriction digestions<br />
• Fast and easy-to-use method with less than<br />
10 minutes hands-on time<br />
• Flexible 10 to 50μL elution volume<br />
for different DNA concentration needs<br />
• Visual color indicator to the capture buffer<br />
ensures optimal pH for maximum DNA<br />
binding and recovery<br />
No. of Purifications Cat. No. Price<br />
100 95026-728 170.00<br />
250 95026-730 400.00<br />
10x96-well Plates 95026-726 1,345.00<br />
PyroScript ®<br />
RT-PCR<br />
2X Master Mix<br />
One Step, One Enzyme, One Master Mix<br />
Enables thirty minute reverse transcription-PCR amplification<br />
of RNA up to 400bp in length without a separate reverse<br />
transcription step. Unique thermostable PCR enzyme<br />
with efficient reverse transcription activity streamlines the<br />
process by reducing hands-on time and the possibility for error.<br />
Just add template, primers, and cycle. Detect amplification products<br />
by gel electrophoresis or real-time analysis. Extreme thermostability<br />
of the enzyme allows denaturation of crude specimens at 94°C to<br />
simplify sample preparation. Reverse transcription at 70°C, or even<br />
higher, improves analysis of highly-structured RNA templates.<br />
• Fast - Amplify viral and cellular RNA in 30 minutes<br />
• High Temperature -<br />
Reverse transcription at > 70°C<br />
• Convenient - Just add<br />
primers and RNA template<br />
PyroScript RT-PCR 2X Master Mix Kit Cat. No. Price<br />
50 rxns 89137-906 125.00<br />
100 rxns 89137-908 225.00<br />
500 rxns (5x100) 89137-910 999.00<br />
<strong>Genomics</strong><br />
Gel/PCR DNA Fragments Kits<br />
IBI Standard Gel/PCR DNA Fragments Kits are designed to recover or<br />
concentrate DNA fragments from 50bp to 10Kb using a chaotropic salt<br />
to dissolve the agarose and denature the enzymes. The DNA fragments in<br />
the chaotropic salt are bound to the glass fiber matrix of the spin column.<br />
Contaminants are washed with a wash buffer and the purified DNA is then<br />
eluted from the column, with recovery rates around 80 to 90%.<br />
IBI Gel/PCR DNA Purification Kit for small DNA fragments is specifically<br />
designed to recover or concentrate DNA fragments of 50 to 200bp from<br />
agarose gel or other enzymatic reactions utilizing an easy, 20 minute<br />
protocol, as well as provide excellent yield and purity.<br />
• Easy to use standard protocols<br />
• Excellent yield and purity<br />
• Save up to 45% on your sample prep costs<br />
Description Cat. No. Price<br />
Gel PCR DNA Fragments Extraction Kits<br />
4 Preps 95039-640 Ea./ 7.14<br />
100 Preps 95039-642 Ea./ 110.16<br />
300 Preps 95039-644 Ea./ 333.54<br />
Small DNA Fragments Extraction Kits<br />
4 preps 97060-556 Pk. 2/ 7.14<br />
100 Preps 97060-558 Pk. 2/ 107.10<br />
300 Preps 97060-560 Pk. 2/ 328.44<br />
Life Science Magazine vwr.com 800.932.5000 17
<strong>Genomics</strong><br />
Gel Imagers<br />
Basic Gel Imaging With Choice of Options<br />
Capture and print images with this easy to use,<br />
compact imager. Users can see fluorescent<br />
gels through the unique viewport<br />
window. The window blocks UV and<br />
allows users to safely see gels when<br />
illuminated by the UV<br />
transilluminator. Save images<br />
to the memory card or connect<br />
to a PC to transfer the images.<br />
System Includes:<br />
Monochrome CCD camera<br />
Lightweight hood with handles<br />
Ethidium bromide filter<br />
Choice of transilluminator,<br />
camera, and door configuration<br />
Additional models available<br />
Ask your <strong>VWR</strong> Sales Representative<br />
about accessories including:<br />
thermal printer and paper,<br />
converter plates (converts UV to<br />
white light for Coomasie Blue<br />
and Silver Stains), gel cutter<br />
and gel tools, and analysis software.<br />
See www.vwrsp.com/imagers<br />
for the complete product line.<br />
Description Wavelength, nm Cat. No. Price<br />
Gel Imager, 0.3 MP Camera, 115V<br />
20x20cm 302 89131-380 7,117.94<br />
20x20cm 302/365 89131-388 7,301.10<br />
21x26cm 302 89131-384 7,321.45<br />
21x26cm 302/365 89131-392 7,504.62<br />
Gel Imager Plus, 1.3 MP Camera, Side Access Doors, 115V<br />
20x20cm 302 89131-396 8,115.16<br />
20x20cm 302/365 89131-404 8,318.68<br />
21x26cm 302 89131-400 8,318.68<br />
21x26cm 302/365 89131-408 8,522.19<br />
18 Life Science Magazine vwr.com 800.932.5000<br />
Green PCR Reagents<br />
Environmentally Friendly<br />
GenScript’s advanced high-stability technology has led to the invention of a<br />
new generation of PCR reagents– Green PCR Reagents. The Green series of<br />
reagents, from the proprietary Taq, dNTP, to PCR mixtures, are stable for one<br />
month if stored at room temperature, or for over six months if stored at 4°C.<br />
The high-stability feature comes with increased half-life of active enzymes at<br />
high temperatures, which results in more amplification cycles and higher yield.<br />
• No freeze-thaw cycles provide<br />
instant access to high-throughput<br />
PCR automation<br />
• Helps preserve energy associated<br />
with storage and shipping<br />
• No contamination activity has been<br />
detected in standard test reactions<br />
• Enhanced yields with longer<br />
enzyme half-life<br />
• Stable at room temperature –<br />
stop refrigerating and save energy<br />
Description Size Cat. No. Price<br />
Green Taq DNA Polymerase 1,000U 95055-024 61.80<br />
Stabilized dNTP Mix, 10mM 0.5mL 95057-806 29.86<br />
UV, Dual UV, and Variable<br />
Intensity Transilluminators<br />
• Uniquely designed with<br />
increased UV intensity<br />
and uniformity<br />
• Instant-on capabilities<br />
• No lamp flicker<br />
• Reduced electrical<br />
consumption<br />
Visit www.vwrsp.com/imagers<br />
for a complete listing of sizes<br />
and options.<br />
89131-452<br />
UV Transilluminator Filter Size, cm Cat. No. Price<br />
302nm UV 20x20 89131-440 1,379.00<br />
302nm UV 21x26 89131-444 1,617.00<br />
Dual, 302/365nm UV 20x20 89131-464 1,670.00<br />
Dual, 302/365nm UV 21x26 89131-468 1,935.00<br />
Variable Intensity, 302nm UV 20x20 89131-452 1,431.00<br />
Variable Intensity, 302nm UV 21x26 89131-456 1,670.00
Multiskan ®<br />
GO UV/Vis<br />
Spectrophotometer<br />
Excellent for DNA/RNA Assays<br />
with Both Microplates and Cuvettes<br />
The Thermo Scientific Multiskan GO microplate<br />
spectrophotometer reads 96- and 384-well<br />
plates and cuvettes. A broad wavelength range<br />
including UV as well as pathlength correction<br />
and fast reading speed make it an ideal tool<br />
for any photometric research application,<br />
including DNA/RNA and protein analysis.<br />
Excellent measurement precision guarantees<br />
excellent sensitivity in DNA and RNA<br />
measurements. The Multiskan GO offers<br />
true usability both as standalone or in PC<br />
control. When high throughput is required,<br />
quantitative and qualitative DNA assays can<br />
be run in 384-well plate format, and low<br />
throughput needs are fulfilled with simple<br />
ready-made cuvette sessions. DNA spectrum<br />
measurement is also a valuable tool for fast<br />
analysis of the sample quality.<br />
• Stand-alone use for quick and simple<br />
cuvette and plate measurements<br />
• Easy assay setup for demanding assays<br />
with PC control<br />
• Ready-made cuvette session for<br />
DNA/RNA concentrations and purity<br />
Multiskan GO accepts<br />
versatile cuvettes.<br />
Measurement data can<br />
easily be saved on a USB<br />
memory stick for transfer<br />
to a computer for<br />
further processing.<br />
Description Cat. No. Price<br />
Multiskan GO, w/ Cuvette 97051-718 12,257.00<br />
Multiskan GO, w/o Cuvette 97051-716 10,197.00<br />
Blocking Solutions,<br />
Buffers, and Substrates<br />
<strong>Genomics</strong><br />
Founded in 1962, Rockland manufactures over 5,000 antibodies and<br />
antibody-based tools in its laboratories near Philadelphia, PA. Antibodies<br />
are in the areas of Cell Signaling, Cytokines, Notch Signaling, NFkB<br />
Pathway, PI3 Kinase Pathway, Ubiquitin, and UBL Proteins.<br />
• Sensitive<br />
• Quality made<br />
• 100% guaranteed<br />
Description<br />
Blocking Solutions<br />
Size Cat. No. Price<br />
BLOTTO Blocking Agent 500g RLB501-0500 50.00<br />
Bovine Serum Albumin (BSA)<br />
Fraction V<br />
50g RLBSA50 80.00<br />
Bovine Serum Albumin 30%<br />
Solution (BSA 30%)<br />
500mL RLBSA-30 385.00<br />
ELISA Microwell Blocking<br />
Buffer & Stabilizer<br />
1L RLMB-064-1000 155.00<br />
Fluorescent Western Blot<br />
Blocking Buffer<br />
500mL RLMB-070 115.00<br />
Goat Serum (NGS) 10mL RLB304 90.00<br />
IHC Blocking Buffer 100mL RLMB-071-0100 85.00<br />
Mouse Serum (NMS)<br />
Buffers<br />
10mL RLB308 225.00<br />
EDTA, 0.5M, pH 8.0 100mL RLMB-014 50.00<br />
PBS, 10X, pH 7.2 1L RLMB-008 50.00<br />
SDS-PAGE Running Buffer,<br />
10X, pH 8.3<br />
1L RLMB-017 60.00<br />
TAE, 50X, pH 8.3 1L RLMB-020 75.00<br />
TBS, 10X, pH 7.5<br />
Substrates<br />
1L RLMB-012 60.00<br />
ABTS Liquid Peroxidase 100mL RLABTS-100 80.00<br />
BCIP/NBT Liquid Alk. Phos. 100mL RLNBT-100 80.00<br />
Chemiluminescent FemtoMax<br />
Super Sensitive<br />
110mL RLFEMTOMAX-110 295.00<br />
TMBE Liquid Peroxidase 1L RLTMBE-1000 175.00<br />
Life Science Magazine vwr.com 800.932.5000 19
<strong>Genomics</strong><br />
Mouse Genotyping in Less Than One Hour<br />
KAPA Kits for Rapid Extraction and Amplification of DNA from Mouse Tissue<br />
KAPA Mouse Genotyping Kits Contain:<br />
• KAPA Express Extract - 15 minute extraction using no<br />
organic solvents and requiring no centrifugation or<br />
pH neutralization.<br />
• KAPA2G Fast Genotyping Mix - 45 minute amplification<br />
using a novel DNA polymerase engineered for high<br />
processivity and extreme speed.<br />
• Available in a convenient master mix format with loading<br />
dye, in both hot start and non-hot start formulations.<br />
Template DNA for mouse genotyping is routinely prepared from ear or<br />
tail biopsy samples. Typically, samples are incubated for several hours<br />
or overnight with Proteinase K, followed by purification of the DNA to<br />
remove salts and detergents. Alternatively, DNA is released from the<br />
mouse tissue by heating the sample in an alkaline solution, followed<br />
by neutralization in a Tris-HCl buffer with an acidic pH. Proteinase K<br />
protocols yield extracts with a higher DNA concentration and quality,<br />
but are laborious and time-consuming. Heat lysis protocols allow for<br />
rapid generation of PCR-ready DNA, but samples vary in quality and<br />
the concentration of amplifiable template, leading to reduced PCR<br />
success rates with wild-type DNA polymerases.<br />
KAPA Biosystems offers a unique solution for mouse genotyping.<br />
KAPA Mouse Genotyping Kits contain KAPA Express Extract for<br />
DNA extraction and KAPA2G Fast Genotyping Mix for DNA<br />
amplification. KAPA Express Extract DNA Extraction Kits contain a<br />
novel thermostable protease and buffer system designed for rapid and<br />
efficient, single-tube mouse tissue lysis. Good quality, PCR-ready DNA<br />
can be generated in as little as 15 minutes with minimal handling,<br />
thereby reducing the risk of sample loss or contamination. The<br />
process yields sufficient template for multiple assays and is easily<br />
scaled to handle samples in a 96-well format. KAPA2G Fast<br />
Genotyping Mix with dye is ideally suited for the fast and reliable<br />
amplification of DNA fragments across a wide range of amplicon<br />
lengths and GC contents. This ready-to-use cocktail contains KAPA2G<br />
Fast DNA polymerase, a novel enzyme engineered for improved<br />
processivity and speed. Together, these reagents allow for significantly<br />
reduced turnaround times and improved success rates in mouse<br />
genotyping (Figure 1).<br />
20 Life Science Magazine vwr.com 800.932.5000<br />
Total reaction time (hours)<br />
6.0<br />
5.0<br />
4.0<br />
3.0<br />
2.0<br />
1.0<br />
0.0<br />
1.0<br />
KAPA Mouse<br />
Genotyping Kit<br />
5.0<br />
Proteinase K +<br />
Wild-type Taq<br />
4.0<br />
Alkaline lysis +<br />
Wild-type Taq<br />
Figure 1: The KAPA Mouse Genotyping Kit outperforms crude DNA<br />
extraction methods used for mouse genotyping, in significantly shorter<br />
turnaround times. Results for five amplicons (312-915bp) generated with<br />
the KAPA Mouse Genotyping Kit (1) were compared to those obtained<br />
with two commonly used methods (2 and 3) (bottom panel). With the<br />
KAPA Mouse Genotyping Kit, DNA lysates were prepared from mouse tails<br />
with the rapid (15 minutes), single-tube KAPA Express Extract system.<br />
Amplification with the KAPA2G Fast Genotyping Mix with dye was<br />
completed in 45 minutes. In contrast, DNA lysates were prepared with<br />
a ~3.5-hour Proteinase K protocol (2) or a rapid (~2.5-hour) alkaline<br />
lysis method (3) (top panel). In both cases, amplification was performed<br />
with wild-type Taq (1.5-hour cycling protocol). Results obtained with the<br />
KAPA Mouse Genotyping Kit were equal or better (more specific) than<br />
those obtained with other methods, which (depending on the exact DNA<br />
extraction protocol used) may take at least four times as long, or up to<br />
one day to complete.
From Tail to Type in One Hour<br />
Tail or<br />
Ear Tissue<br />
Incubation at<br />
75°C and 95°C<br />
Fast PCR<br />
Gel Electrophoresis<br />
<strong>Genomics</strong><br />
PRODUCT OVERVIEW<br />
Current workflows for the extraction and amplification of DNA for mouse<br />
genotyping can benefit from improvements in throughput, turnaround<br />
time and reliability.<br />
KAPA Mouse Genotyping Kits include KAPA Express Extract, a novel<br />
thermostable protease and buffer system that allows the extraction of<br />
PCR-ready DNA from mouse tissue in as little as 15 minutes, and KAPA2G<br />
Fast Genotyping Mix with dye, containing a DNA polymerase engineered<br />
via a process of molecular evolution for high processivity and extreme<br />
speed. The combination of KAPA Express Extract and KAPA2G Fast<br />
Genotyping Mix allows for the reliable extraction and amplification of<br />
DNA fragments from mouse tissue in 1 hour, as compared to ≥1 day<br />
with conventional protocols.<br />
The KAPA Express Extract system has been designed for optimal tissue<br />
lysis and sample preservation. Unlike existing protocols that rely on<br />
proteinase K digestion, extractions using KAPA Express Extract are<br />
conveniently performed in a single-tube, without the need for hazardous<br />
chemicals and multiple washing steps. Extracted DNA is then amplified<br />
with KAPA2G Fast Genotyping Mix (2X) with dye, a ready-to-use master<br />
mix containing all components for Fast PCR, except primers and<br />
template. The master mix is designed for routine Fast PCR and improved<br />
performance, compared to wild-type Taq DNA polymerase. The master<br />
mix with dye additionally contains two inert dyes to allow for the analysis<br />
of reaction products by gel electrophoresis directly after PCR, i.e. without<br />
needing to add a DNA loading solution.<br />
Description Size Cat. No. Price<br />
KAPA Mouse Genotyping Kit 500 rxn 97060-478 450.00<br />
KAPA HotStart Mouse Genotyping Kit 500 rxn 97060-480 500.00<br />
KAPA2G Robust HotStart DNA Polymerase<br />
2G Robust HS ReadyMix 100 rxn 89125-076 89.28<br />
2G Robust HS ReadyMix 500 rxn 89125-078 341.38<br />
2G Robust HS Enzyme Kit 250 U 89125-064 157.55<br />
2G Robust HS Enzyme Kit 500 U 89125-066 288.86<br />
KAPA2G Fast HotStart DNA Polymerase<br />
2G Fast HS ReadyMix 100 rxn 89125-110 52.52<br />
2G Fast HS ReadyMix 500 rxn 89125-112 196.95<br />
2G Fast HS Enzyme Kit 250 U 89125-090 144.42<br />
2G Fast HS Enzyme Kit 500 U 89125-092 199.57<br />
KAPA HiFi HotStart DNA Polymerase<br />
HiFi HS ReadyMix 100 rxn 89125-040 126.05<br />
HiFi HS ReadyMix 500 rxn 89125-042 525.20<br />
HiFi HS w/dNTP Mix 250 U 89125-036 110.29<br />
HiFi HS w/dNTP Mix 500 U 89125-038 262.60<br />
KAPA HRM Fast PCR Kits, Size<br />
1mL – 97060-314 75.00<br />
5mL – 97060-316 325.00<br />
10mL – 97060-318 600.00<br />
Life Science Magazine vwr.com 800.932.5000 21
<strong>Genomics</strong><br />
Hazard Reducing RNA Kits RNA Purification Dyes<br />
and Solutions<br />
Phenol-Free Total RNA Purification Kit<br />
1.5% Formaldehyde Agarose Gel<br />
Formaldehyde-Free RNA Gel Kit<br />
30<br />
Amresco ® Competitor<br />
Agilent BioAnalyzer Gel Image<br />
Amresco ® Competitor<br />
Small RNA<br />
Species<br />
Size range of RNA purified with Phenol-Free Total RNA Purification Kit versus<br />
a competitor’s kit. Note the presence of small RNA species (red circles) in the<br />
samples isolated via Phenol-Free Total RNA Purification Kit and the absence<br />
of these species in the competitor RNA preparation.<br />
Purifies high quality RNA in just<br />
20 minutes<br />
No additional staining or<br />
destaining steps<br />
Ethidium Bromide Formaldehyde-Free RNA Dye<br />
25 20 15 10 5 30 25 20 15 10 5<br />
Total RNA µm Total RNA µm<br />
Denatured in Formaldehyde-Free RNA loading buffer containing either<br />
ethidium bromide or Formaldehyde-Free RNA dye and incubated 10 minutes<br />
at 65°C. Formaldehyde-Free RNA gel dye is as sensitive as ethidium bromide.<br />
All-in-one RNA gel kit produces<br />
immediate results without<br />
hazardous chemicals<br />
No formaldehyde or<br />
ethidium bromide<br />
One convenient solution<br />
Non-toxic, non-mutagenic,<br />
alternative to ethidium bromide<br />
No long incubations or<br />
buffer recirculation<br />
Description Size Cat. No. Price<br />
Phenol-Free Total RNA<br />
Purification Kit<br />
50 preps 97064-308 178.00<br />
Formaldehyde-Free RNA Gel Kit<br />
Visit vwr.com for Kit contents.<br />
15 gels 97064-300 179.90<br />
22 Life Science Magazine vwr.com 800.932.5000<br />
RiboReserve RNA Storage Solution stabilizes RNA for long term<br />
storage and is sterile and RNase-free – will not inhibit downstream RT-PCR,<br />
transcription, or Northerns.<br />
RNA EZ-Vision ® and EZ-Vision ® RNA Ladder provide instant visualization<br />
with non-mutagenic, fluorescent dye in loading buffer – no post staining,<br />
destaining, or ethidium bromide.<br />
Gold-N-Gel RNA Stain (200X) is a non-mutagenic, in-gel fluorescent<br />
stain for instant RNA visualization – no post staining, destaining, or<br />
ethidium bromide.<br />
Description Size Cat. No. Price<br />
RiboReserve RNA Storage Solution 12x1mL 97063-258 49.37<br />
RiboReserve RNA Storage Solution 50mL 97063-260 31.00<br />
RNA EZ-Vision Dye as Loading Buffer 2x1.5mL 97064-294 89.00<br />
EZ-Vision RNA Ladder 150μL* 97063-358 172.00<br />
Gold-N-Gel RNA Stain, 12.5mL 97064-304 88.25<br />
30x100mL gels<br />
* Includes 7 bands ranging from 1,500 nt - 9,000 nt, sufficient for 25 lanes<br />
ExiSpin <br />
The World’s First Combination<br />
Vortex/Centrifuge<br />
Convenience & Time Savings<br />
ExiSpin provides reproducible results using optimized<br />
vortexing of multiple samples. Four 8-strip 0.2mL tubes<br />
can be handled simultaneously enabling up to 32 tubes<br />
to be run at once. Or use the 12-place rotor (included), to<br />
load twelve 1.5mL tubes simultaneously for cell lysis and other applications.<br />
Programmable speed and time guarantee the reproducibility of each<br />
application. Use it for minipreps to resuspend oligos, set up your PCR<br />
reactions, or any task that requires vortexing and a subsequent spin-down.<br />
Once you try the ExiSpin, you’ll find that it’s an essential instrument in<br />
your laboratory.<br />
• Fully automated spin-vortex-spin centrifuge<br />
• Can be used as a centrifuge,<br />
a vortex, or both<br />
• Rotors for microcentrifuge tubes<br />
and strip tube included<br />
Description Cat. No. Price<br />
ExiSpin Vortex/Centrifuge 89170-878 870.00<br />
PCR PreMix 95027-448 52.00<br />
HotStart PCR PreMix 95027-520 73.00<br />
TLA High Fidelity/Long Range PCR PreMix 95027-510 79.00
AcroPrep <br />
Advance Filter<br />
Plates for Ultrafiltration<br />
AcroPrep Advance Filter Plates are a versatile format to advance your<br />
sample prep. High performance membrane housed in optimized filter plate<br />
configurations meet a spectrum of sample prep requirements. Our filter plates<br />
for ultrafiltration provide rapid, efficient separation of biomolecules.<br />
• Omega membrane provides high recovery – typically results in greater<br />
than 90%<br />
• New well design results in faster, more consistent filtration rates across<br />
the plate<br />
• Applications include size exclusion, PCR clean-up, nucleic acid purification,<br />
and protein separation<br />
MWCO/Pore Size<br />
Filter Plates with Omega, 350µL<br />
Cat. No. Pack of 10<br />
3K 97052-106 332.92<br />
10K 97052-108 332.92<br />
30K 97052-110 343.92<br />
100K 97052-112 343.92<br />
Enzyme Immunoassay<br />
Kits and Peptides<br />
Bachem. Quality Matters.<br />
Proteomics<br />
Bachem is pleased to offer<br />
peptide, protein, and<br />
immunoassay products to<br />
the life science community<br />
that are manufactured to<br />
unmatched standards of<br />
quality and reliability. Our<br />
Enzyme Immunoassays<br />
(EIA) are highly sensitive,<br />
highly specific, and<br />
non-radioactive, making<br />
them cost-effective and easy to use. Bachem’s peptides and complementary<br />
immunology products are indispensable tools used in a wide variety of life<br />
science fields of study including apoptosis, diabetes, cardiovascular diseases,<br />
neuroscience, obesity, osteoporosis, and pituitary dysfunction.<br />
• High Purity Reagents – Set the standard for quality and reliability –<br />
the benchmark in consistent purity and solubility<br />
• Convenient – Peptides, proteins, and immunoassay kits available from<br />
stock in convenient pack sizes<br />
• Comprehensive – The widest selection of bioactive peptides and proteins<br />
currently available, and a complementary immunology product line<br />
Description<br />
High Sensitivity EIA Kits, Rabbit Host<br />
Cat. No. Each<br />
ß-MSH (Human) S-1426.0001BA 535.00<br />
Adrenomedullin (Rat) S-1423.0001BA 535.00<br />
Alarin (Rat) S-1424.0001BA 535.00<br />
Copeptin (Human) S-1427.0001BA 550.00<br />
Copeptin (Rat) S-1422.0001BA 535.00<br />
Maxadilan S-1425.0001BA 565.00<br />
Pancreastatin, 33-48 (Human)<br />
Peptides<br />
S-1421.0001BA 535.00<br />
ß-MSH (Human) H-1475.0001BA 235.00<br />
Adrenomedullin (Rat) H-2934.0500BA 431.00<br />
Copeptin (Human) H-6718.0500BA 281.00<br />
Copeptin (Rat) H-6726.0500BA 281.00<br />
Maxadilan H-6734.0500BA 909.00<br />
Pancreastatin, 33-48 (Human) H-6506.0001BA 346.40<br />
Life Science Magazine vwr.com 800.932.5000 23
Proteomics<br />
Spin-X ®<br />
Spin-X UF 500 for<br />
samples up to 500µL<br />
UF Concentrators<br />
Corning ® Spin-X UF Centrifugal Concentrators offer a simple, one-step<br />
procedure for concentrating or desalting proteins and other biomolecules<br />
with 90% or better recovery. The vertical membrane design and thin channel<br />
filtration chamber minimizes membrane fouling and provides fast, high-speed<br />
concentrating, even with particle-laden solutions. Integrated dead-stop design<br />
eliminates risk of spinning to dryness; no respinning necessary.<br />
Choice of three sizes for greater flexibility:<br />
Spin-X UF 6 for<br />
samples up to 6mL<br />
Spin-X UF 20 for samples<br />
up to 20mL, (14mL if<br />
using fixed angle rotors)<br />
Low binding polyethersulfone (PES) membranes are available with five<br />
molecular weight cut-offs (MWCO): 5,000, 10,000, 30,000, 50,000, and<br />
100,000 to meet all of your concentrating needs. Choose a MWCO<br />
1 1<br />
⁄2 to ⁄3 smaller than the protein to be concentrated.<br />
The MWCO and graduations are printed right on the side of the concentrator<br />
tube to avoid mix-ups. Spin-X UF 6 and 20 concentrators can be used with<br />
either swinging bucket or fixed-angle rotors. Spin-X UF 500 concentrators<br />
require fixed-angle rotors.<br />
MWCO<br />
Spin-X UF 500, 500µL<br />
Cat. No. Case of<br />
5,000 97027-888 25/ 83.29<br />
10,000 97027-890 25/ 83.29<br />
30,000 97027-892 25/ 83.29<br />
50,000 97027-894 25/ 83.76<br />
100,000<br />
Spin-X UF 6, 6mL<br />
97027-896 25/ 83.76<br />
5,000 97027-898 25/ 113.10<br />
10,000 97027-900 25/ 113.10<br />
30,000 97027-902 25/ 113.10<br />
50,000 97027-904 25/ 113.10<br />
100,000<br />
Spin-X UF 20, 20mL<br />
97027-906 25/ 113.10<br />
5,000 97027-908 12/ 102.82<br />
10,000 97027-910 12/ 102.82<br />
30,000 97027-912 12/ 102.82<br />
50,000 97027-914 12/ 102.82<br />
100,000 97027-916 12/ 102.82<br />
24 Life Science Magazine vwr.com 800.932.5000<br />
SuperSignal ®<br />
Western<br />
Blot Enhancer<br />
Increase Signal-to-Noise Ratio and Band<br />
Development for Better Sensitivity<br />
The Thermo Scientific SuperSignal Western Blot Enhancer contains a<br />
membrane treatment reagent and a primary antibody diluent that increase<br />
both signal intensity and sensitivity 3- to 10-fold compared to detection<br />
performed without it.<br />
When a protein or antigen is difficult to detect because of low abundance<br />
or poor immunoreactivity, use of SuperSignal Western Blot Enhancer can<br />
significantly reduce background and enhance detection of low-abundance<br />
and weakly immunoreactive antigens. This versatile kit works with PVDF and<br />
nitrocellulose membranes, and is compatible with fluorescent, chromogenic<br />
and chemiluminescent detection.<br />
Increase Sensitivity – Achieve 3- to 10-fold increase in signal intensity<br />
and sensitivity<br />
Improve Specificity – Improves signal-to-noise ratio for poor quality<br />
and low affinity antibodies<br />
Better Clarity – Reduces background for cleaner Western blots<br />
No. Mini Blots Cat. No. Price<br />
2 PI46641 41.12<br />
25 PI46640 204.57
Kodak <br />
BioMax ®<br />
Film –<br />
See the Difference!<br />
Enhanced visualization so that even<br />
the faintest signals can be seen with<br />
BioMax’s exclusive clear film base.<br />
Kodak has the widest selection of<br />
film types to provide sensitivity, speed,<br />
and contrast designed for specimens<br />
tagged with all commonly used markers.<br />
BioMax Light Film<br />
Maximum clarity and sensitivity<br />
Highest signal-to-noise ratio results<br />
with all chemiluminescent kits<br />
BioMax MR Film<br />
Two-fold increase in sensitivity in the detection of 35S, 33P, and<br />
14C labeled samples<br />
Fast quenching chemiluminescent-tagged specimens<br />
Time to properly load your cassettes and deliver images with<br />
unsurpassed resolution<br />
BioMax XAR Film<br />
Exceptional results for most radio and chemiluminescent-labeled samples<br />
Most versatile scientific film available today<br />
BioMax MS Film<br />
Maximum sensitivity for light emitted from BioMax MS Intensifying Screens<br />
Ideal for Northern, Southern, and dot blotting applications<br />
Suitable for low intensity detection or reduced exposure time<br />
Most sensitive detection system available<br />
For other Kodak film options,<br />
please visit vwr.com.<br />
Dimensions, cm Cat. No. Pack of 50 Case of 5 Packs<br />
BioMax Light<br />
20.3x25.4* IB-1788207 245.79 –<br />
13x18 † IB-1917012 386.44 1,469.58<br />
BioMax MR<br />
20.3x25.4* IB-IB8701302 403.59 1,534.79<br />
13x18* IB-8941114 199.52 –<br />
BioMax XAR-2<br />
20.3x25.4• IB1651454 375.04 1,426.20<br />
13x18• IB1651496 251.30 955.63<br />
BioMax MS<br />
20.3x25.4* IB-8294985 403.59 1,534.79<br />
13x18* IB-1111681 262.70 999.01<br />
* Non-Interleaved † Individually Wrapped • Alternate-Interleaved<br />
Ordering Information: Alternate-interleaved sheets are packed with<br />
sheets of paper to protect film.<br />
Proteomics<br />
pH Test Strips and<br />
DoubleZone Indicator Papers<br />
pH Test Strips<br />
BDH ® pH Test Strips are a high<br />
quality, color-fixed pH test strip. They<br />
are always ready for immediate use, and<br />
as single use devices, they are completely<br />
maintenance free.<br />
Designed for safe testing of dangerous, poisonous, or aggressive liquids<br />
Longest available handle protects user from contact with sample<br />
Fixed dye cannot bleed into the sample, protecting it against<br />
contamination and enabling measurements even in weakly buffered<br />
or strongly alkaline solutions<br />
DoubleZone Indicator Papers<br />
For each pH value, these papers show a single<br />
color that can be matched with the color scale at<br />
intervals of 0.2 to 1pH. They are also able to show<br />
two different colors for each pH value at intervals of<br />
0.3 to 1pH unit for even more accurate reading and<br />
better estimation of intermediate values. The colors<br />
on the color scales are specially mixed to perfectly<br />
match the reaction color of the indicator papers to<br />
make the read-off of results easy and accurate.<br />
The BDH DoubleZone Indicator Papers are<br />
10mm wide and come in 5m long rolls.<br />
Description pH Graduation Cat. No. Each Pack of 5<br />
Universal Range Test Strips<br />
0-14.0 1.0 BDH35309.606 13.00 63.33<br />
Intermediate Range Test Strips<br />
0-6.0 0.5 BDH35310.601 13.00 63.33<br />
2.0-9.0 0.5 BDH83930.601 13.00 63.33<br />
4.5-10.0 0.5 BDH35311.604 13.00 63.33<br />
6.0-10.0 0.3/0.4 BDH83931.601 13.00 63.33<br />
7.0-14.0 0.5 BDH35312.607 13.00 63.33<br />
Narrow Range Test Strips<br />
0.3-2.3 0.3/0.4 BDH35314.604 13.00 63.33<br />
1.7-3.8 0.3 BDH35315.607 13.00 63.33<br />
3.6-6.1 0.3/0.5 BDH35316.601 13.00 63.33<br />
5.1-7.2 0.3 BDH83932.601 13.00 63.33<br />
6.0-7.7 0.3/0.4 BDH35317.604 13.00 63.33<br />
7.5-9.5 0.2/0.4 BDH35318.607 13.00 63.33<br />
7.9-9.8 0.2/0.4 BDH83933.601 13.00 63.33<br />
DoubleZone Indicator Papers<br />
1.0-4.3 0.5 BDH35301.600 15.00 70.00<br />
1.0-12.0 1.0 BDH35300.606 15.00 70.00<br />
3.5-6.8 0.5 BDH35302.603 15.00 70.00<br />
5.0-8.0 0.5 BDH35303.606 15.00 70.00<br />
7.0-10.0 0.3/0.4 BDH70035.607 15.00 70.00<br />
9.5-14.0 0.5 BDH70036.601 15.00 70.00<br />
Life Science Magazine vwr.com 800.932.5000 25
Microbiology<br />
UV Crosslinker<br />
Multipurpose Ultraviolet Exposure<br />
The <strong>VWR</strong> ® Crosslinker’s overhead<br />
254nm UV is used for sterilization<br />
and decontamination of plates,<br />
small tools, etc. The Crosslinker<br />
assures consistent UV output<br />
for many applications.<br />
• Flexibility and reliability<br />
through preset conditions<br />
and manual controls for<br />
ultraviolet or time exposures<br />
• Factory presettings that deliver 120,000 microjoules or 5 minutes of<br />
exposure; the maximum UV energy setting is 999,900 microjoules per cm2 • Door window that blocks UV radiation, but still allows observation<br />
of the process<br />
• Five 8-watt, 254nm ultraviolet tubes for uniform overhead UV illumination<br />
• Small footprint for benchtop use<br />
Description Cat. No. Price<br />
UV Crosslinker, 115V 89131-484 1,586.00<br />
UV Crosslinker, 230V 89131-486 1,586.00<br />
UV Hand Lamps<br />
Ultraviolet lamps have many uses in the micro lab. The 365nm UV lamp can<br />
be used for water testing, quality control inspection, non-destructive testing,<br />
and sanitation. The 254nm UV lamp can be used for TLC, E-Coli testing,<br />
and sterilization.<br />
Model Wavelength, nm Cat. No. Price<br />
UV-A 365 89131-488 259.00<br />
UV-AC 254/365 89131-492 323.00<br />
UV-AB 302/365 89131-496 333.00<br />
Note: The lamps use 6-watt tubes and feature a lightweight, rugged<br />
aluminum design with a scratch-resistant powder paint.<br />
26 Life Science Magazine vwr.com 800.932.5000<br />
PolySeed ®<br />
For BOD5 Analysis<br />
vs Natural Seed<br />
Which Seed Should You Use?<br />
When it comes to deciding between PolySeed or natural seed for BOD5<br />
testing, the choice is clear. For fast, economical BOD5 analysis with consistent<br />
results, use PolySeed. Look at the facts and try it for yourself. Contact your<br />
local <strong>VWR</strong> Sales Representative to request your free sample today.<br />
• Pre-measured,<br />
easy-to-use capsules<br />
• Non-pathogenic dry<br />
product rehydrates<br />
quickly and easily<br />
• Two year shelf-life<br />
• Free of nitrifying<br />
micro-organisms<br />
• EPA recommended<br />
• Formulated according to<br />
The Standard Methods for<br />
Examination of Water and<br />
Wastewater<br />
• Each capsule yields seed<br />
inoculum for up to 200<br />
BOD5 tests<br />
PolySeed Natural Seed<br />
Convenient Inconvenient<br />
Safe Safety Hazard<br />
Consistent Inconsistent<br />
Known Bacterial Content Unknown Bacterial Content<br />
Free of Nitrifying Bacteria Possible Nitrifying Bacteria<br />
Description Cat. No. Price<br />
PolySeed 66130-430 98.65<br />
PolySeed-NX CBOD 5 66130-432 139.36<br />
Polytox ® Rapid Biological Toxicity Screening Test 66130-436 199.98
Masterclave ®<br />
Series<br />
Automated Culture<br />
Media Preparators<br />
The AES CHEMUNEX Masterclave Series represents the most advanced and<br />
easy-to-use media preparators available today. With 30 years of experience<br />
specializing in culture media manufacturing, you can expect the highest<br />
quality agar and broth preparation.<br />
Our Masterclaves provide a large magnetic stirrer to ensure homogeneity, and<br />
feature accurate core temperature monitoring and easy-to-clean<br />
systems. Sterilization temperatures range from 95 to 125°C. Units also<br />
feature a sterilization period up to 60 minutes and a dispensing option<br />
from 25 to 80°C.<br />
Produce your own high quality media quickly, accurately, and safely!<br />
• Masterclave 09 capacity 1 to 9L<br />
• Masterclave 528 capacity 5 to 28L<br />
• Masterclave 60 capacity 10 to 60L<br />
Description Capacity, L Cat. No. Price<br />
Masterclave 09 1 to 9 97059-212 22,808.82<br />
Masterclave 528 5 to 28 97059-214 34,716.89<br />
Masterclave 60 10 to 60 97059-216 63,006.65<br />
Culture Media<br />
and Media Bases<br />
Microbiology<br />
For Microbiology and Molecular Biology Applications<br />
HiMedia ® manufactures<br />
and supplies high-quality<br />
products using stringent<br />
quality parameters.<br />
Mueller Hinton broth is used<br />
to determine the susceptibility<br />
of bacteria to sulphonamides<br />
by the tube dilution method.<br />
Luria broth is used for the<br />
cultivation and maintenance<br />
of recombinant strains of Escherichia coli. Nutrient Broth is used for<br />
cultivation of less fastidious organisms, while Lactose broth is used for the<br />
detection of coliform bacteria in water, foods, and dairy products. Letheen<br />
broth AOAC is used for determination of bacterial activity of quaternary<br />
ammonium compounds using Escherichia coli or Staphylococcus aureus.<br />
Contact your <strong>VWR</strong> Life Science Specialist to learn more<br />
about the complete range of HiMedia products available.<br />
Description Cat. No. Price<br />
Brain Heart Infusion Broth 95021-488 88.13<br />
Brain Heart Infusion Broth, HiVeg 61000-752 92.68<br />
Buffered Peptone Water with NaCl 95020-848 90.24<br />
Casein Soybean Digest Agar 95021-622 58.62<br />
Lactose Broth 95020-262 66.88<br />
Letheen Broth, AOAC 95022-874 122.37<br />
Luria Broth 95022-016 52.54<br />
Luria Bertani Agar, Miller 95020-584 86.96<br />
Luria Bertani HiVeg Agar, Miller 61000-490 86.96<br />
MacConkey Agar w/ 0.15% Bile Salts, 95020-204 79.57<br />
CV, and NaCl<br />
Mueller Hinton Agar 95039-350 78.30<br />
Mueller Hinton Broth 95039-356 100.97<br />
Nutrient Agar 95019-996 101.05<br />
Nutrient Broth 95019-998 80.89<br />
Nutrient Broth, HiVeg 61000-218 84.93<br />
Plate Count Agar 95020-238 82.27<br />
Plate Count Agar, HiVeg 61000-378 86.51<br />
Potato Dextrose Agar 95020-250 98.03<br />
Sabouraud Dextrose Agar, HiVeg 61000-326 67.98<br />
Soybean Casein Digest Medium 95020-030 40.23<br />
(Tryptone Soya Broth)<br />
Soybean HiVeg Agar 61000-848 61.57<br />
* All items listed are 500g; visit vwr.com for recommended applications<br />
Life Science Magazine vwr.com 800.932.5000 27
Cell Biology<br />
Antibodies and Conjugates<br />
To Power Your Immunoassays<br />
Boost Sensitivity and Specificity<br />
KPL has a complete offering of affinity purified secondary antibodies and<br />
conjugates that provide high signal and low background in immunoassays.<br />
They recognize a broad range of species labeled with multiple enzyme<br />
and fluorochrome tags. KPL antibodies enable the development of high<br />
performance immunoassays, such as ELISA, blotting, and immunochemistry.<br />
• We make what we sell – KPL controls the entire process from raw<br />
materials to final product<br />
• Broad product offering – Antibodies recognize the<br />
immunoglobulins of over 20 species with seventeen<br />
labels including a range of DyLight fluorescent tags<br />
• Products in stock – Available for immediate shipment<br />
Description<br />
DyLight 488<br />
Cat. No. Price<br />
Anti-Goat IgG (H+L) 95058-496 141.80<br />
Anti-Human IgG (H+L) 95058-494 131.30<br />
Anti-Mouse IgG (H+L) HSA 95058-512 131.30<br />
Anti-Rabbit IgG (H+L) 95058-500 131.30<br />
Anti-Rat IgG (H+L)<br />
Horseradish Peroxidase<br />
95058-504 141.80<br />
AntiI-Goat IgG (H+L) 95058-778 44.50<br />
Anti-Human IgG (H+L) 95058-720 60.60<br />
Anti-Mouse IgG (H+L), HSA 95058-740 57.30<br />
Anti-Rabbit IgG (H+L) 95058-730 59.60<br />
Anti-Rat IgG (H+L) 95058-782 44.10<br />
* All products listed are 1mg<br />
28 Life Science Magazine vwr.com 800.932.5000<br />
cellgro ®<br />
Molecular<br />
Biology Grade Water<br />
Mediatech cellgro ® Molecular Biology Grade Water<br />
is ideal for the preparation of reagents, rinsing<br />
glassware and plasticware, and other molecular<br />
biology applications where RNase, DNase, and<br />
Protease-free water is required. No toxic agents,<br />
including DEPC, are used in the preparation,<br />
eliminating possible interference with enzymatic<br />
reactions. Ideal downstream results require the<br />
right reagents and you can trust cellgro ®<br />
Molecular Biology Grade Water for your<br />
important research needs.<br />
• Use for preparing reagents and other<br />
tasks requiring high sterility<br />
• Produced under cellgro ®<br />
high industry standards<br />
Description Size Cat. No. Price<br />
Sterile Molecular Grade Water, 1L 45001-044 Pk. 6/ 122.49<br />
Research Use<br />
SOC Medium, 10x10mL 45001-099 Ea./ 74.14<br />
Molecular Reagent<br />
Electroporation Systems<br />
BTX ® offers platform<br />
systems designed to<br />
provide transfection and<br />
transformation solutions.<br />
The ECM 830 square wave<br />
system efficiently transfects<br />
mammalian cells, including<br />
primary cells in vitro using either cuvettes<br />
or 96-well electroporation. Ideal for transfecting<br />
delicate tissues in vivo or ex vivo using BTX specialty<br />
electrodes. The ECM 630 is a powerful exponential<br />
decay wave system for high efficiency prokaryotic<br />
transformations in cuvettes alone, or can be expanded<br />
up to 96-well electroporation for high throughput<br />
library screening. Both systems can use the BTXpress<br />
High Performance Electroporation Buffer to increase<br />
transfection efficiencies and critical cell viability of<br />
primary cells including difficult to transfect cells.<br />
A single buffer for all mammalian cell types.<br />
Description Cat. No. Price<br />
Electroporation System 58018-004 7,964.14<br />
Electroporation System w/ Cuvettes 58017-932 6,600.21<br />
High Solution, 50 Reaction Kit 89130-542 263.99
Cell Biology<br />
Antibodies<br />
<strong>VWR</strong>’s Life Science Portfolio continually<br />
expands to support your research<br />
and production needs.<br />
To learn more, contact us today!<br />
www.vwr.com 1.800.932.5000<br />
Cell Counters<br />
Cell Culture Media & Serum<br />
Cell Culture Systems<br />
Cellular Assays<br />
Electrocomponent Cells<br />
Electroporation Systems<br />
ELISA<br />
c<br />
www.vwrsp.com/antibodies<br />
US Only<br />
US Only<br />
Transfection Reagents<br />
29 Life Science Magazine vwr.com 800.932.5000<br />
<strong>Genomics</strong><br />
Cloning Products<br />
DNA Markers<br />
DNA & Biological Storage<br />
Electrophoresis Equipment & Power Supplies<br />
Electrophoresis Reagents<br />
Microarray Products<br />
Molecular Biology Reagents<br />
Nucleic Acid Purification<br />
PCR & qPCR Reagents<br />
US Only<br />
US Only<br />
Thermal Cyclers for Real-Time & Standard PCR<br />
US Only<br />
US Only<br />
US Only
Microbiology<br />
Anaerobic Supplies & Gas Generators<br />
Antibiotics<br />
Biological Indicators/Stains & Reagents<br />
Bottled Media & Prepared Plates<br />
Dehydrated Media<br />
Identification Tests<br />
Microbiology Instrumentation<br />
Reference Microorganisms<br />
PRODUCTION BIOLOGICALS & PROCESSING<br />
Bioprocessing<br />
Peptones/Hydrolysates<br />
QC/QA - Environmental Monitoring<br />
Proteomics<br />
Electrophoresis Equipment & Power Supplies/Reagents<br />
Enzymes & Inhibitors<br />
Film/Photodocumentation<br />
Precast Gels/Protein Molecular Weight Markers<br />
Protein Assays<br />
Protein/Nucleic Acid Labeling<br />
Protein Purification<br />
c<br />
US Only<br />
US Only<br />
US Only<br />
Peptide Synthesis and Gene Regulation<br />
US Only<br />
c US Only<br />
US Only<br />
US Only<br />
US Only<br />
US Only<br />
c<br />
30
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Promo Code 3221<br />
Promo Code 3222<br />
Take advantage of this introductory offer for new customers only –<br />
Save 50% off on a GE Healthcare triplePrep Kit!<br />
With illustra triplePrep, you can purify genomic<br />
DNA, total RNA, and total protein from the<br />
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prep variability compared to using individual<br />
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Description Cat. No. Pack of 50<br />
triplePrep Kit MP-13865101 229.00<br />
One redemption per customer.
FREE<br />
PRODUCT!<br />
Buy one package of AcroPrep Advance<br />
Filter Plates for ultrafiltration, and get<br />
one package of the same product FREE.<br />
For additional product information see our ad<br />
on page 23 of this issue (LSM V.12, Issue 25).<br />
MWCO/Pore Size Cat. No. Pack of 10<br />
Filter Plates w/ Omega Membrane, 350µL<br />
3K 97052-106 332.92<br />
10K 97052-108 332.92<br />
30K 97052-110 343.92<br />
100K 97052-112 343.92<br />
$78<br />
VALUE!<br />
FREE 100mL SuperSignal West Pico<br />
Chemiluminescent Substrate with the<br />
purchase of any Thermo Scientific active<br />
GTPase Pull-Down and Detection Kit.<br />
Visit www.vwrsp.com/lspromos and enter<br />
promo code for details and kit contents.<br />
No redemption required, simply use these<br />
‘MP’ catalog numbers when placing your order.<br />
Pull-Down Detection Kits, 30 rxns Cat. No. Price<br />
Active Arf1 MP16121BNDL 670.00<br />
Active Arf6 MP16122BNDL 670.00<br />
Active Cdc42 MP16119BNDL 670.00<br />
Active Rac1 MP16118BNDL 670.00<br />
Active Rap1 MP16120BNDL 670.00<br />
Active Ras MP16117BNDL 670.00<br />
Active Rho MP16116BNDL 670.00<br />
SAVE UP<br />
TO $253<br />
FREE AcroPrep <br />
Advance Filter Plates!<br />
Volume of No. of Transfections<br />
6-well Plates Reagent Per Well Per 1.5mL Vial<br />
jetPRIME 4µL 375<br />
Lipofectamine 2000 10µL 150<br />
Promo Code 3223<br />
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Promo Code 3217<br />
Chemiluminescent Substrate<br />
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Use less reagent and perform 2-3 more DNA transfections per vial.<br />
Lipofectamine is a trademark of Life Technologies Corporation.<br />
New transfection reagents from<br />
Polyplus transfection - Buy 1, get 1 FREE.<br />
Description Size Cat. No. Price<br />
jetPRIME Transfection Reagent 0.75+ Buffer 89129-922 253.00<br />
INTERFERin SIRNA Transfection Reagent 1mL 89129-930 206.00<br />
15%<br />
OFF<br />
15% Off Pierce Protein Concentrators<br />
These disposable centrifugal devices are designed<br />
for high-performance concentration, diafiltration, or<br />
buffer-exchange of biological samples. Offer valid<br />
for 10-pack only. No redemption required, simply use<br />
these 'MP' catalog numbers when placing your order.<br />
MAGAZINE<br />
Description Size Cat. No. Price<br />
9K 7 MPPI87748PR 53.55<br />
9K 20 MPPI87749PR 96.90<br />
20K 7 MPPI87750PR 53.55<br />
20K 20 MPPI87751PR 96.90<br />
150K 7 MPPI89920PR 53.55<br />
150K 20 MPPI89921PR 96.90<br />
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Special Pricing on Pierce<br />
Protein Concentrators!<br />
FREE HRP or DyLight<br />
Labeled Antibodies!<br />
Purchase either our Wash Solution<br />
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one of the conjugates listed<br />
below FREE.<br />
Promo Code 3225<br />
Promo Code 3218<br />
Description Size, mg Cat. No. Price<br />
DyLight 488-Labeled Antibodies<br />
Anti-Rat IgG (H+L) Ab DL488 0.1 95058-254 75.00<br />
Anti-Ms IgG (H+L) HSA Ab DL488 0.1 95058-256 75.00<br />
Anti-Rabbit IgG (H+L) Ab DL488 0.1 95058-252 75.00<br />
Anti-Goat IgG (H+L) Ab DL488 1.0 95058-496 141.80<br />
Peroxidase-Labeled Antibodies<br />
Anti-Rat IgG (H+L) Ab HRP 0.5 95058-782 44.10<br />
Anti-Ms IgG (H+L) Ab HSA HRP 0.1 95058-236 32.00<br />
Anti-Rabbit IgG (H+L) Ab HRP 0.1 95058-230 32.00<br />
Anti-Goat IgG (H+L) Ab HRP 0.5 95058-778 44.50<br />
TERMS OF PROMOTIONS. To redeem promotions, go to<br />
www.vwrsp.com/promotions and enter the promo code in the “Find”<br />
box to view a specific promotion. Promotion valid on purchases made<br />
between 6/15/11 – 9/15/11 and requests must be redeemed by 10/15/11,<br />
unless specified otherwise. Visit vwr.com for additional promotion terms.<br />
0611 30M Lit. No. 92872<br />
32
StellARray <br />
qPCR Arrays<br />
Fast, Accurate Gene Expression Profiling from<br />
Pre-Validated, Pathway-Specific Arrays<br />
• StellARray System<br />
• GeneSieve Query<br />
• StellARray qPCR Arrays<br />
• Global Pattern Recognition<br />
Analysis Tool<br />
StellARray qPCR Arrays are PCR primer sets of genes relevant to a<br />
specific disease or cell state. Available in both 96-well and 384-well<br />
plates, StellARray qPCR Arrays are compatible with most common qPCR<br />
instruments. Choose from a broad panel of over 150 research area-specific<br />
arrays, or use our convenient, online Custom Plate Designer to configure<br />
your own arrays. Analyze your experiments using the analysis tool of your<br />
choice, or use our Global Pattern Recognition tool to free your experiment<br />
from the bias of normalizer gene changes.<br />
• Choose from more than 150 pre-validated research area-specific qPCR<br />
arrays or configure custom arrays online<br />
• Perform a comprehensive range of experiments in your specific<br />
research area<br />
• Utilize ΔΔCt analysis, or achieve reliable normalization with StellARray<br />
GPR Software, which automatically identifies the best normalizer<br />
amplicons based on lowest variance<br />
Contact your <strong>VWR</strong> Life Science Specialist or visit<br />
www.vwrsp.com/StellARay to learn more about the<br />
complete range of Lonza StellARray products available.<br />
Cell Biology<br />
jetPRIME <br />
DNA and siRNA<br />
Transfection Reagents<br />
Use Only One Highly Efficient and Versatile Reagent<br />
% Transfection Efficiency<br />
90<br />
80<br />
70<br />
60<br />
50<br />
40<br />
30<br />
20<br />
10<br />
0<br />
HeLa Cos-7 NIH-3T3 CHO-K1 HEK-293<br />
jetPRIME is a new powerful transfection reagent designed by Polyplus<br />
transfection for efficient delivery of DNA and siRNA into many adherent<br />
cell types. jetPRIME provides higher transfection efficiency, uses less<br />
reagent and nucleic acid, is cost-effective,<br />
provides gentle transfections, and<br />
delivers excellent gene silencing at<br />
10nM siRNA concentration.<br />
jetPRIME Transfection Reagent Cat. No. Price<br />
0.1mL + Buffer 89129-920 56.00<br />
0.75mL + Buffer 89129-922 253.00<br />
1.5mL + Buffer 89129-924 430.00<br />
5 x 1.5mL + Buffer 89129-926 1,933.00<br />
5 x 1.5mL + 120 5X Concentrated Buffer 89137-972 1,853.00<br />
<strong>VWR</strong> also offers a toll-free Life Science technical service line<br />
1.800.897.5463, Option 3, and a dedicated e-mail address:<br />
life_science@vwr.com<br />
Life Science<br />
Magazine Supplier Pg<br />
AES CHEMUNEX . . . . . . . . . . . . . . 27<br />
AlBioTech . . . . . . . . . . . . . . . . . . . 13<br />
Amresco ® . . . . . . . . . . 22, Back Cover<br />
Bachem . . . . . . . . . . . . . . . . . . . . . 23<br />
BDH ® . . . . . . . . . . . . . . . . . . . . . . . 25<br />
Bioneer . . . . . . . . . . . . . . . . . . . . . . 22<br />
Biotium . . . . . . . . . . . . . . . . . . . . . . 16<br />
BTX ® /Harvard Apparatus . . . . . . . . 28<br />
Carestream Molecular Imaging . . . 25<br />
C.B.S. Scientific . . . . . . . . . . . . . . . . 13<br />
Corning . . . . . . . . . . . . . . . . . . . . . 24<br />
Eppendorf . . . . . . . . . . . . . . . . . . . 3-4<br />
G-Biosciences ® . . . . . . . . . . . . . . . . . 5<br />
GE Healthcare . . . . . . . . . . . 5, 17, 31<br />
GenScript . . . . . . . . . . . . . . . . . . . . 18<br />
HiMedia ® . . . . . . . . . . . . . . . . . . . . 27<br />
jetPRIME <br />
Life Science<br />
Magazine Supplier Pg<br />
IBI Scientific. . . . . . . . . . . . . . . . . . . 17<br />
Idaho Technology Inc. . . . . . . . . . . 6-7<br />
InterLab ® /Polyseed ® . . . . . . . . . . . . 26<br />
KAPA Biosystems. . . . . . . . . 20-21, 31<br />
KPL . . . . . . . . . . . . . . . . . . . . . . 28, 32<br />
Lonza . . . . . . . . . . . . . . . . . . 14-15, 33<br />
Lucigen ® . . . . . . . . . . . . . . . . . . . . . 17<br />
Mediatech/Cellgro ® . . . . . . . . . . . . . 28<br />
Omega bio-tek . . . . . . . . . . . . . . . . . 5<br />
Pall Life Sciences . . . . . . . . . . . . 23, 32<br />
Polyplus transfection . . . . . . . . 32, 33<br />
Quanta BioSciences. . . . . . . . . . 11-12<br />
Rockland Immunochemicals. . . . . . 19<br />
Techne . . . . . . . . . . . . . . . . . . . . . 8-10<br />
Thermo Scientific . . 16, 19, 24, 31, 32<br />
<strong>VWR</strong> . . . . . . . . . . . . . . . . . . . . . 18, 26<br />
Life Science Magazine vwr.com 800.932.5000 33<br />
L2K<br />
FACS analysis 24 hours<br />
after GFP plasmid<br />
transfection according<br />
to the manufacturer’s<br />
recommendations.
1.800.932.5000 vwr.com<br />
Prices, product appearance, and specifications are current at the time of<br />
printing, subject to change without notice. Availability for certain products<br />
may be limited by federal, state, provincial, or local licensing requirements.<br />
<strong>VWR</strong> makes no claims or warranties concerning sustainable/green products.<br />
Any claims concerning sustainable/green products are the sole claims of the<br />
manufacturer and not those of <strong>VWR</strong> <strong>International</strong>, LLC. All prices are in<br />
U.S. dollars unless otherwise noted. Offers valid in USA only, void where<br />
prohibited by law or company policy, while supplies last. Visit vwr.com to<br />
view our privacy policy and additional disclaimers.<br />
<strong>VWR</strong>, forms of <strong>VWR</strong>, and the <strong>VWR</strong> logo and/or design are either registered<br />
trademarks ® , trademarks , or service mark SM of <strong>VWR</strong> <strong>International</strong>, LLC<br />
in the United States and/or other countries. All other marks referenced herein<br />
are registered trademarks, trademarks, or service marks of the respective<br />
owner(s). For a complete list of trademark owners please visit vwr.com.<br />
©2011 <strong>VWR</strong> <strong>International</strong>, LLC. All rights reserved.<br />
0611 30M Lit. No. 92872<br />
ATTN.<br />
MAILROOM:<br />
If addressee is no<br />
longer with the<br />
organization, please<br />
deliver to laboratory<br />
products buyer.<br />
Thank you.<br />
Now Available Through <strong>VWR</strong><br />
What you may not know about AMRESCO ® might<br />
surprise you. AMRESCO has been meeting the needs<br />
of life science companies and research facilities for<br />
over three decades. Our products can be found across<br />
the globe in over 60 countries; in labs, hospitals and<br />
companies you know well.<br />
Behind each life science research product we bring<br />
to market is a desire to make a difference in the<br />
way research is conducted. Our mission is to deliver<br />
solutions that provide quality, convenience, and<br />
performance so that researchers can focus on the<br />
future and move possibilities into reality.<br />
Antibiotics Media<br />
& Components<br />
MAGAZINE<br />
Western Blotting<br />
& ELISA<br />
<strong>VWR</strong> Literature Library<br />
C/O ARCHWAY<br />
20770 Westwood Drive<br />
Strongville, OH 44149<br />
ATTN. POST OFFICE: Forwarding Service Requested<br />
Nucleic Acid<br />
Analysis<br />
pure precise performance<br />
Buffers &<br />
Detergents<br />
Detection<br />
& Labeling<br />
Electrophoresis Proteomics Histology<br />
See the RNA Purification and Analysis Products Featured on Page 22 that Reduce the Hazard in Your Lab.