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Sorghum Diseases in India

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Detection and Identification of Viruses<br />

and Virus <strong>Diseases</strong> of <strong>Sorghum</strong><br />

R.W. Toler 1 and L.M. Giorda 2<br />

Abstract<br />

Plant virology is the study of viruses that <strong>in</strong>fect plants. <strong>Sorghum</strong> viruses are distributed worldwide<br />

and cause economic damage to the host. A wide range of abnormalities is caused by these<br />

viruses. Some of the most noticeable effects are changes <strong>in</strong> color, death of tissue, and changes <strong>in</strong><br />

growth habit. Most if not all sorghum viruses <strong>in</strong>fect the plant systemically. Symptomology may<br />

play a role <strong>in</strong> identification, but symptomology alone is not def<strong>in</strong>itive. Diagnosis of a sorghum<br />

virus disease on a rout<strong>in</strong>e basis is required for the development of control measures. Indicator host<br />

and host-range studies are important <strong>in</strong> <strong>in</strong>itial diagnosis. Early diagnosis may <strong>in</strong>clude microscopic<br />

studies of cellular <strong>in</strong>clusions. These may be followed by quick-dip electron microscopy (EM).<br />

Serological tests may follow. Comb<strong>in</strong>ed EM and serology studies, e.g., immunosorbent electron<br />

microscopy, may be <strong>in</strong> order. The EM studies should provide <strong>in</strong>formation on particle morphology,<br />

serology, and on the relationship of known viruses and stra<strong>in</strong>s. For f<strong>in</strong>ite criteria of a virus,<br />

purification is <strong>in</strong> order. Antiserum specific to the virus be<strong>in</strong>g studied can be prepared to the<br />

purified virus. After purification, <strong>in</strong>formation <strong>in</strong>clud<strong>in</strong>g sedimentation coefficient, molecular<br />

weight, isoelectric po<strong>in</strong>t, ext<strong>in</strong>ction coefficient, 260/280 ratio, and buoyant density can be obta<strong>in</strong>ed.<br />

Molecular studies should identify prote<strong>in</strong> species, term<strong>in</strong>al am<strong>in</strong>o acids, and nonparticle prote<strong>in</strong>s.<br />

Lipids and polyam<strong>in</strong>es present are characterized. The nucleic acid is analyzed for type and strandedness.<br />

Number and size of nucleic acids are determ<strong>in</strong>ed, as well as base composition and ratios.<br />

Other dist<strong>in</strong>guish<strong>in</strong>g characteristics of the nucleic acid <strong>in</strong>clude presence of a methylated cap,<br />

am<strong>in</strong>o acid-accept<strong>in</strong>g ability, or polyaden<strong>in</strong>e at the 3' end. Subgenomic RNA may or may not be<br />

present. Some viruses, such as the rhabdoviruses and reoviruses, may conta<strong>in</strong> polymerases with<strong>in</strong><br />

the particle. Virus identification encompasses evaluation of the sum total of all <strong>in</strong>formation available,<br />

demonstrat<strong>in</strong>g relatedness or nonrelatedness to knoum sorghum viruses, or establish<strong>in</strong>g the<br />

identity of a new virus.<br />

Symptomology<br />

The earliest detection of sorghum viruses <strong>in</strong> the<br />

field is made by not<strong>in</strong>g their observable effects<br />

on the host. However, observable changes <strong>in</strong>duced<br />

by plant viruses may be similar to those<br />

associated with other diseases and disorders <strong>in</strong><br />

the field or area and cause misidentification.<br />

Usually, the first symptom observed is some<br />

type of leaf discoloration. Discolored plants are<br />

compared to healthy plants of the same cultivar<br />

<strong>in</strong> the same sow<strong>in</strong>g. General chlorosis or yellow<strong>in</strong>g<br />

may <strong>in</strong>dicate <strong>in</strong>fection by viral or other<br />

pathogens. However, one must elim<strong>in</strong>ate possible<br />

nutritional effects, particularly those result<strong>in</strong>g<br />

from m<strong>in</strong>or element deficiency or excess<br />

(Clark 1986). Viral chlorosis must also be differentiated<br />

from genetic chlorosis or anomalies<br />

caused by biotic or abiotic agents (Jordan et al.<br />

1986). Chlorotic effects caused by herbicides,<br />

1. Professor of Plant Pathology and Microbiology, Texas A&M University, College Station, TX 77843, USA.<br />

2. <strong>Sorghum</strong> Research Leader, INTA, Cordova, Argent<strong>in</strong>a 5988.<br />

Toler, R.W., and Giorda, L.M. 1992. Detection and ident<strong>in</strong>cation of viruses and virus diseases of sorghum. Pages 153-159 <strong>in</strong><br />

<strong>Sorghum</strong> and millets diseases: a second world review. (de Milliano, W.A.J., Frederlksen, R.A., and Bengston, G.D., eds). Patancheru,<br />

A.P. 502 324, <strong>India</strong>: International Crops Research Institute for the Semi-Arid Tropics.<br />

153

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