Incidence, Distribution and Characteristics of Major Tomato Leaf ...
Incidence, Distribution and Characteristics of Major Tomato Leaf ... Incidence, Distribution and Characteristics of Major Tomato Leaf ...
Incidence, distribution and characteristics of major tomato leaf curl and mosaic virus diseases virus diseases in Uganda. Where more detailed and correct viral diseases information is available, tomato leaf curl viruses alone are reported to cause 100% crop yield loss (Czosnek and Laterrot, 1997). This devastating situation could also be possible for Uganda. Major tomato growing areas in Uganda have dry and wet seasons alternating in a year (Mukiibi, 2001; Ministry of Agriculture Zoning Report, 2005 unpublished, Annex 1). The dry seasons are between June to August and January to February, while wet seasons are between March to Mid-June and Mid-August to December. Elsewhere, seasonality is known to affect tomato virus diseases incidence and distribution (Moustafa, 1991). Therefore, our objective is to survey for incidence and distribution, and to identify viruses infecting tomato in Uganda, as was done elsewhere (Czosnek and Laterrot, 1997; Green et al., 1991; Bock, 1982; Martyn, 1968). We assume that viruses occurring on tomato in neighbouring countries also infect tomato in Uganda. Knowledge of these viruses would provide a sound basis for future resistant tomato variety introduction and breeding programmes. 3.2 Materials and Methods 3.2.1 Field Survey During the first rainy season (March-June of 1997), second rainy season (August- November 1997, the dry season (January-February 1998), and the first rainy season (March to July 1998), a survey was conducted to cover major tomato growing districts in Uganda, i.e., Iganga, Kasese, Kabale, Mbale, Mbarara, Mpigi, Mukono, and Rakai (Figure 3.1). According to the Ministry of Agriculture, Animal Industry and Fisheries (MAAIF) and the National Agricultural Research Organization (NARO), these districts are located in five agro-climatic zones (Table 3.1 and Annex 1), which are among the ten zones into which Uganda is divided (Annex 1). 48
Incidence, distribution and characteristics of major tomato leaf curl and mosaic virus diseases Based on NARO and MAAIF zones, a survey was conducted using a random stratified design (Elkinton, 1993). Zones and districts formed the first stratum of sampling, while farmer fields were randomly selected using calculator random numbers to form the second level of sampling. Five tomato fields (of about 0.25 – 1 ha each) were randomly selected in each district. 3.2.1.1 Collection of Virus Symptoms-bearing Tomato Samples For each of the five fields in every selected district, twenty leafy shoot samples were picked from individual plants showing virus-like symptoms by the smart-sampling approach (Bragard, 2006 personal communication), and were placed in paper bags. At least five leaf curl samples were collected from each district, except for Kasese, where neither leaf curl nor mottling symptoms were observed during the visit made in the dry season (January-February 1998) until later at the beginning of the rain season (March- July 1998), probably because inoculum-bearing plants had died and vector population decreased to very low levels at the end of the previous growing season, a situation referred to as random extinction ² by Garcia-Arenal et al. (2000). Ohnesonge et al. (1981) report about death of whiteflies during the winter season, which is another good example. In addition to the 800 leafy tomato shoot samples, suspected weed samples were also collected from within and around tomato fields to determine tomato viruses host range (Bock, 1982). Detailed field notes were made on virus symptoms, presence of vectors such as aphids by simple observation, and varieties grown as well as general cropping practices such as intercropping by interviewing farmers (Annex 3). Vector infestations of tomato fields were recorded as low, medium, or high, if (≤25%), (25% < to 50%), and (50% < to 100%) of tomato plants in the field were infested, respectively (Cho et al., 1989). Virus symptom severity was scored on a scale of 1-5, based on extent of leaf damage and percentage number of leaves showing symptoms, whereby 1=1-20% (very mild); 2=21-40% (mild); 3=41-60% (severe); 4=61-80% (very severe); and 5=81-100% (almost dead). Virus disease incidence, defined as the extent of infection in the field, and calculated according to Allen et al. (1983) formula: ² In this report by Garcia et al., 2000, the world random seems to be used to mean sudden 49
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<strong>Incidence</strong>, distribution <strong>and</strong> characteristics <strong>of</strong> major tomato leaf curl <strong>and</strong> mosaic virus diseases<br />
Based on NARO <strong>and</strong> MAAIF zones, a survey was conducted using a r<strong>and</strong>om stratified<br />
design (Elkinton, 1993). Zones <strong>and</strong> districts formed the first stratum <strong>of</strong> sampling, while<br />
farmer fields were r<strong>and</strong>omly selected using calculator r<strong>and</strong>om numbers to form the<br />
second level <strong>of</strong> sampling. Five tomato fields (<strong>of</strong> about 0.25 – 1 ha each) were r<strong>and</strong>omly<br />
selected in each district.<br />
3.2.1.1 Collection <strong>of</strong> Virus Symptoms-bearing <strong>Tomato</strong> Samples<br />
For each <strong>of</strong> the five fields in every selected district, twenty leafy shoot samples were<br />
picked from individual plants showing virus-like symptoms by the smart-sampling<br />
approach (Bragard, 2006 personal communication), <strong>and</strong> were placed in paper bags. At<br />
least five leaf curl samples were collected from each district, except for Kasese, where<br />
neither leaf curl nor mottling symptoms were observed during the visit made in the dry<br />
season (January-February 1998) until later at the beginning <strong>of</strong> the rain season (March-<br />
July 1998), probably because inoculum-bearing plants had died <strong>and</strong> vector population<br />
decreased to very low levels at the end <strong>of</strong> the previous growing season, a situation<br />
referred to as r<strong>and</strong>om extinction ² by Garcia-Arenal et al. (2000). Ohnesonge et al. (1981)<br />
report about death <strong>of</strong> whiteflies during the winter season, which is another good example.<br />
In addition to the 800 leafy tomato shoot samples, suspected weed samples were also<br />
collected from within <strong>and</strong> around tomato fields to determine tomato viruses host range<br />
(Bock, 1982). Detailed field notes were made on virus symptoms, presence <strong>of</strong> vectors<br />
such as aphids by simple observation, <strong>and</strong> varieties grown as well as general cropping<br />
practices such as intercropping by interviewing farmers (Annex 3). Vector infestations <strong>of</strong><br />
tomato fields were recorded as low, medium, or high, if (≤25%), (25% < to 50%), <strong>and</strong><br />
(50% < to 100%) <strong>of</strong> tomato plants in the field were infested, respectively (Cho et al.,<br />
1989). Virus symptom severity was scored on a scale <strong>of</strong> 1-5, based on extent <strong>of</strong> leaf<br />
damage <strong>and</strong> percentage number <strong>of</strong> leaves showing symptoms, whereby 1=1-20% (very<br />
mild); 2=21-40% (mild); 3=41-60% (severe); 4=61-80% (very severe); <strong>and</strong> 5=81-100%<br />
(almost dead). Virus disease incidence, defined as the extent <strong>of</strong> infection in the field, <strong>and</strong><br />
calculated according to Allen et al. (1983) formula:<br />
² In this report by Garcia et al., 2000, the world r<strong>and</strong>om seems to be used to mean sudden<br />
49