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Cothurnia limnoriae - NSCEP | US EPA - US Environmental ...

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that were classified with an unknown population status were included in the counts of<br />

NIS in regions or ecoregions.<br />

Stocked: Species maintained through active human intervention, usually for aquaculture.<br />

Stocked species known only to exist in aquaculture facilities were given a population<br />

status of not established and were not included in the counts of NIS. Stocked species that<br />

had been reported from the wild were assigned a population status of established, not<br />

established, or unknown, as appropriate. In many cases it was unclear whether a stocked<br />

species occurred in the wild, especially in Asia. If there was a potential that the species<br />

could occur in the wild, the stocked species was assigned an unknown population status<br />

and included in the counts of NIS. Inclusion of these stocked species in the counts of NIS<br />

could potentially overestimate the actual number of NIS in the region.<br />

Taxonomy and “Also Known As” Alternative Names<br />

The taxonomy of each of the species in the Atlas was recorded on the species profiles.<br />

Taxonomy above the level of genus was based on the World Register of Marine Species<br />

(WoRMS; http://www.marinespecies.org/index.php), an international database with the objective<br />

of providing the authoritative list of names of all marine species globally. In most cases,<br />

WoRMS was also used for species designations, though for some taxa regional authoritative<br />

references were used (e.g., Coan et al., 2000 for bivalves in the NEP).<br />

In addition to the higher level taxonomy, up to five “Also Known As” or alternative names were<br />

recorded in the Atlas. These are other scientific names by which the selected species may also be<br />

known. The primary purpose in listing these alternative species names is to assist invasion<br />

biologists in tracking the global distribution and invasion history of a species. They are not<br />

meant for formal taxonomic evaluations, and the users should consult the taxonomic literature<br />

for complete synonym lists and authorities. The seven types of alternative names recognized in<br />

the Atlas are:<br />

Synonym: A scientific name that was previously applied to a taxon but is no longer<br />

accepted. As used in the Atlas and the PICES database, the objective was to limit<br />

synonyms to those with a one-to-one relationship with the currently accepted scientific<br />

name.<br />

Ambiguous synonym: A possible synonym of the species, such as when it is not certain<br />

exactly what species is being referred to (i.e., Polydora nr. cornuta). Ambiguous<br />

synonyms are also associated with species complexes; the cases in which a species name<br />

is now believed to consist of more than one valid species but which are not, as yet,<br />

individually named. Because of the taxonomic uncertainties, all synonyms of species<br />

complexes are referred to as ambiguous, with the exception of names explicitly<br />

identifying the taxon as a complex (e.g., complex, hyperspecies, etc.). We classify proparte<br />

synonyms as “partial synonyms” rather than as ambiguous.<br />

Partial Synonym: Partial synonyms are species names that are synonyms of two or more<br />

valid species. Thus, there is not a one-to-one relationship between a partial synonym and<br />

a valid species name. This can happen when an older species is split into two or more<br />

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