GHENT UNIVERSITY Karoline FONCK - International Centre for ...
GHENT UNIVERSITY Karoline FONCK - International Centre for ...
GHENT UNIVERSITY Karoline FONCK - International Centre for ...
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2.2.3. Laboratory procedures<br />
The microbiological and serological laboratory methods are described in detail in the different<br />
chapters. The samples were collected by the research staff and transported to the research<br />
laboratory at the Department of Medical Microbiology, University of Nairobi. Here thoroughly<br />
trained personnel per<strong>for</strong>med the tests in excellent conditions and with up-to-date equipment.<br />
The laboratory was a research lab only and did not serve other hospitals or clinics. However,<br />
because of cost-recovery this has changed in the last couple of years of the study. The lab is<br />
funded by Canadian, American, European Union, Belgian and Kenyan research grants. All<br />
senior laboratory staff has been trained in overseas laboratories of the collaborating<br />
institutions.<br />
Some tests were also per<strong>for</strong>med at the laboratory of the STI referral clinic in Nairobi. This lab<br />
had been considerably upgraded by the project and qualified staff had been hired. This lab<br />
per<strong>for</strong>med the quality control <strong>for</strong> the peripheral health centers <strong>for</strong> instance, all positive RPR<br />
tests as well as 10% of the negative samples were retested at STC. The samples from the<br />
STI clinic were in turn controlled by the lab at the University of Nairobi.<br />
Some of the samples were also sent to the laboratories of the collaborating universities<br />
overseas, either to per<strong>for</strong>m the tests that could not be done on site, or <strong>for</strong> quality control on a<br />
random selection of samples. Internal quality control was per<strong>for</strong>med on a regular basis.<br />
2.2.4. Data analysis<br />
Along with the questionnaire, a computerized database structure was created <strong>for</strong> data entry.<br />
Data was entered at the project offices either at the STI clinic or at the University of Nairobi.<br />
Several computers were available to that effect. The data entry was supervised by the<br />
respective research staff and under the overall supervision of the project manager.<br />
The data from the earliest studies were entered in Epi-info (version 6.0) and afterwards<br />
exported to SPSS <strong>for</strong> analysis. Later on, most data were entered and analyzed in SPSS <strong>for</strong><br />
Windows version 8.0 (SPSS Inc. Chicago). For one study the data were first entered in<br />
ACCESS Microsoft and later exported into SPSS. Data were entered continuously<br />
throughout the studies. Interim analysis was per<strong>for</strong>med regularly to monitor the study and<br />
discussed in meetings with the research staff.<br />
OBJECTIVES AND METHODS 20