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Investigating CSI – Background material Table of Contents I ...

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C. Quantification <strong>of</strong> DNA<br />

Southern Blot<br />

The Southern blot is used to detect the presence <strong>of</strong> a particular bit <strong>of</strong> DNA in a<br />

sample. The DNA detected can be a single gene, or it can be part <strong>of</strong> a larger<br />

piece <strong>of</strong> DNA such as a viral genome.<br />

DNA is extracted from the cells and purified<br />

Restriction Digest<br />

DNA is restricted (cut) with enzymes.<br />

DNA fragments<br />

In this example, a large piece <strong>of</strong> DNA is chopped into<br />

smaller pieces using a restriction enzyme.<br />

Loading the Gel<br />

The DNA is loaded into a well <strong>of</strong> the gel matrix.<br />

• Lane 1 contains size standards (a mix <strong>of</strong> known DNA<br />

fragments)<br />

• Lane 2 contains the restricted DNA<br />

• Lane 3 contains unrestricted (whole) DNA<br />

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