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Prime User Manual - ISP

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Figure 6.2. The Fold Recognition panel after Run SSP.<br />

Chapter 6: Fold Recognition<br />

When the secondary structure prediction jobs finish, the SSPs are displayed in the sequence<br />

viewer below (as children of) the query sequence. (If an error occurs when running a structure<br />

prediction program, an error message is printed to the log file displayed in the Monitor panel.)<br />

6.2.3 Editing or Deleting SSPs<br />

You can use your expert knowledge to improve the query’s SSP profile by deleting or editing<br />

SSPs you believe are incorrect.<br />

<strong>Prime</strong> 2.1 <strong>User</strong> <strong>Manual</strong> 45

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