Biomedical Engineering – From Theory to Applications

14
Semantic
Networks
analysis
Biomedical Engineering – From Theory to Applications
To perform text mining, it must be structured (pre-processing) to analyze
texts or discovering interesting patterns that generate new knowledge
(Krallinger et al., 2008). Depending on the methods used in the preprocessing
is the type of representation of the contents of the texts
constructed, and according to this representation, is the kind of patterns
discovered (Harmston et al., 2010).
Based on the ontologies, that formulate a conceptual scheme (a map of
concepts and their relationships) in a given domain, the semantic
expresses the meaning of data, the properties of objects and the complex
relationships between them by a series of formal rules (Robu et al., 2006).
Networks are open structures that can expand without limit of integration
of new nodes based on the communication possibilities that exist in your
environment and share communications code compatible.
It is done through the study of theories of structural behavior, the
dynamics, and influence within the biomedical issues, to establish a likely
explanation for the growth and evolution of real networks in any
advanced biomedical subject.
Table 6. Most frequent literature automatic meta-analysis methods.
Right now exist dozens of scholar free web programs that process literature with one or
more bibliographic meta-analysis methods. Most of those resources are based on PubMed
literature because it is open access records, normalized and robustness information. For this
chapter we choose some of them for details, a list with most of them is in Append.
2.3.1 Bibliometric analysis
HubMed
HubMed (http://www.hubmed.org/) retrieval information from the PubMed´s database
and produces one interface focused basically on browsing, organizing and gathering
information from the biomedical literature. Shows the results arranged by relevance, you
can perform grouping and graphic representation of related articles, can export metadata in
different formats for further analysis.
Twease
Twease is a web-based tool to search in the abstracts for Medline. Index the words of
Medline and provides features to expand a query and thereby find what you are looking for.
Finally, Twease can automatically discover common abbreviations for search phrases.