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Target Discovery and Validation Reviews and Protocols

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286 Sioud<br />

selection), whereas thymocytes with TCR that bind with lower affinity to<br />

MHC-associated self-peptides receive prosurvival signals <strong>and</strong> are allowed to<br />

progress to the simple positive (SP) stage (positive selection). Thymocytes<br />

expressing TCRs that do not interact with the appropriate MHC die by neglect<br />

(immunological ignorance).<br />

Recent studies indicated that the positively selected thymocytes are subjected<br />

to a maturation step, which increases the threshold for their activation by<br />

self-selected peptides (23). As a consequence, peripheral mature T-cells are<br />

properly activated by only foreign peptides of higher affinity (dominant epitopes).<br />

In conclusion, T-cell development in the thymus starts with CD4–CD8– DN<br />

thymocytes, which progress to CD4+CD8+ DP thymocytes, <strong>and</strong> finally to<br />

CD4+ or CD8+ SP thymocytes. Subsequent to maturation, these positively<br />

selected T-cells leave the thymus <strong>and</strong> eventually enter the circulation (Fig. 3).<br />

3. B-Cell Development <strong>and</strong> Maturation<br />

3.1. Pre-B-Cell Antigen Receptor (BCR) Functions as a Biological Sensor<br />

Similar to T-cells, early B-cell development is ordered by successive rearrangements<br />

of IgH <strong>and</strong> IgL gene segments during pro-B- <strong>and</strong> pre-B-cell development<br />

(Fig. 4). This crucial developmental process leads to the generation of a diverse<br />

antibody repertoire for humoral defense against all possible foreign antigens<br />

(24,25). The first step is antigen independent <strong>and</strong> takes place in primary lymphoid<br />

organs, the bone marrow, <strong>and</strong> the fetal liver. In developing B-cells (pro-B-cells),<br />

assembly of the IgH gene occurs before that of the IgL genes. The pro-B-cells<br />

express surrogate light chain encoded by VpreB <strong>and</strong> λ5 genes <strong>and</strong> the rearrangement<br />

machinery encoded by the RAG-1, RAG-2, <strong>and</strong> TdT genes. In human,<br />

only one VpreB gene has been found, whereas several λ5-like genes have been<br />

identified. They are all located on chromosome 22, which also carries the λ<br />

light chain genes.<br />

Within the IgH locus, rearrangement begins on both alleles with joining of a<br />

DH to a JH gene segment. Notably, most cells successfully rearrange two D-J<br />

sequences. These pro-B-cells then go on to recombine a VH segment with one<br />

of the partially assembled DJH alleles, leading to the generation of pre-B-cell<br />

population. After productive VDJH rearrangement, the IgH allele is transcribed<br />

<strong>and</strong> its message is translated, resulting in the production of the transmembrane<br />

form of the heavy chain protein Igµ. Because there are two alleles for each<br />

immunoglobulin locus in the diploid genome, each of which can be activated,<br />

each cell must prevent both alleles from making productive chains. This is<br />

accomplished by checking for productive chain as soon as an allele has<br />

rearranged. Thus, µ heavy chain seems to be functionally equivalent to TCRβchain<br />

in the early states of lymphocyte development.

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