02.03.2013 Views

Target Discovery and Validation Reviews and Protocols

Target Discovery and Validation Reviews and Protocols

Target Discovery and Validation Reviews and Protocols

SHOW MORE
SHOW LESS

You also want an ePaper? Increase the reach of your titles

YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.

260 Skovseth, Küchler, <strong>and</strong> Haraldsen<br />

10. Nikon E-800 fluorescence microscope (Nikon).<br />

11. F-view digital camera controlled by the AnalySIS 3.2 Software (Soft Imaging<br />

Systems GmbH).<br />

12. Reagents for H&E staining (hematoxylin, hexamine, azophloxine, saffron, <strong>and</strong><br />

ethanol).<br />

13. Phosphate-buffered saline (PBS).<br />

14. Bovine serum albumin to dilute antibodies (1.25% for primary reagents <strong>and</strong> 12.5%<br />

for secondary reagents).<br />

15. SuperFrost or chromalun-coated glass slides.<br />

16. 10% Formalin.<br />

2.3.2. Primary Antibodies (Clone, Working Dilution,<br />

Specification, Source)<br />

1. hCD31 (hec7, 0.4 µg/mL, mouse IgG2a, W. A. Muller, New York).<br />

2. hICAM-1 (RRI/1.1.1, 10 µg/mL, mouse IgG1, R. Rothlein, Ridgefield, CT).<br />

3. hVCAM-1 (hec7, 0.4 µg/mL, mouse IgG2a, W. A. Muller, New York).<br />

4. hE-selectin (hec7, 0.4 µg/mL, mouse IgG2a, W. A. Muller, New York).<br />

5. mCD31 (Mec 13.3, 1/100, rat IgG2a, A. Vecchi, Milan).<br />

6. α-Smooth muscle actin, α-SMA (M0851, 10 µg/ml, mouse IgG2a, DakoCytomation<br />

www.dako.com).<br />

2.3.3. Secondary Reagents<br />

1. Alexa 594-conjugated goat anti-rat IgG (10 µg/mL, Invitrogen).<br />

2. Alexa 546-conjugated goat anti-mouse IgG (1 µg/mL, Invitrogen).<br />

3. Fluorescein isothiocyanate (FITC)-conjugated Ulex europaeus lectin (1/400,<br />

Vector Laboratories).<br />

4. Rhodamine-conjugated phalloidin (1/200, Sigma).<br />

2.4. Re-isolation of Endothelial Cells, mRNA Purification, <strong>and</strong> Analysis<br />

1. Collagenase (cat. no. C8167, Sigma).<br />

2. Dispase II (Roche Diagnostics).<br />

3. DNaseI (Roche Diagnostics).<br />

4. Complete MCDB-131 (containing 7.5% fetal calf serum, 10 ng/mL rhEGF,<br />

1 ng/mL rhbFGF, 1 µg/mL hydrocortisone, 50 µg/mL gentamicin, <strong>and</strong> 0.25 µg/mL<br />

amphotericin B).<br />

5. 40-µm Filter (Falcon).<br />

6. Rock’n roller.<br />

7. Antibody to hCD31 (hec7).<br />

8. Dynabeads M-450 coated with sheep anti-mouse IgG (Dynal Biotech).<br />

9. Dynal MPC-6 magnet (Dynal Biotech, Oslo).<br />

10. RNeasy mini kit (QIAGEN GmbH).<br />

11. Dithiothreitol (DDT), oligo(dT), <strong>and</strong> Superscript III reverse transcriptase<br />

(Invitrogen).<br />

12. Taq polymerase <strong>and</strong> buffer, dNTPs.

Hooray! Your file is uploaded and ready to be published.

Saved successfully!

Ooh no, something went wrong!