UNIVERSITY OF WISCONSIN-MADISON

WISCONSIN, MADISON 1 

UNIVERSITY OF 

WISCONSIN-MADISON 

1101 University Avenue 

antagonize or superagonize quorum sensing in Vibrio fischeri, 

ACS Chem. Biol, 2, 315-319 (2007). 

Ilia A. Guzei, Lara C. Spencer, Qi Lin and Helen E. Blackwell, 

N-{(Aminocarbonyl)[(S)-4-nitrobenzyl]methyl}-N-{[ 

(R)-cyclohexyl](cyclohexylaminocarbonyl)methyloxygenase 

by Electron Paramagnetic Resonance: Electronic 

Structure of the Active Site and Mechanistic Implications, 

Biochemistry, 46, 8569-8578 (2007). 

Adam T. Fiedler and Thomas C. Brunold, Spectroscopic 

and Computational Studies of Ni3+ Madison, WI 53706-1396 

TEL: (608) 262-8005 

FAX: (608) 262-3160 

Web: www.chem.wisc.edu 

Email: chair@chem.wisc.edu 

Department of Chemistry 

Robert J Hamers, Professor and Chair. 

Degrees Offered: B.S, M.S, Ph.D. 

Fields of Specialization: Analytical, Inorganic, Organic, 

Physical, Theoretical, Biophysical, Chemical 

Biology, Materials Chemistry. 

Interdisciplinary Program: Materials Science Program 

(Advisory Com. Members From Chem/Phys/ 

Engr. Mech/Elec. Engr/Chem. Engr/Materials Sci. & 

Engr/Nucl. Engr/MS and Ph.D. degrees), Rheology 

Research Center (Exec. Com. Members From Chem/ 

Chem. Engr./Engr. Mech., no degrees offered). 

See Chemical Engineering Section. 

}propanamide methanol solvate, Acta Crystallogr., Sect. E: 

Struct. Rep. Online, E63, o1892-o1894 (2007). 

Matthew D. Bowman, Jennifer C. O’Neill, Joseph R. 

Stringer and Helen E. Blackwell, Rapid identification of antibacterial 

agents effective against Staphylococcus aureus using 

small-molecule macroarrays, Chem. Biol. (Cambridge, 

MA, U. S.), 14, 351-357 (2007). 

Jennifer C. O’Neill and Helen E. Blackwell, Solid-phase 

and microwave-assisted syntheses of 2,5-diketopiperazines: 

small molecules with great potential, Comb. Chem. High 

Throughput Screening, 10, 857-876 (2007). 

Grant D. Geske, Jennifer C. O’Neill, David M. Miller, 

Margrith E. Mattmann and Helen E. Blackwell, Modulation 

of bacterial quorum sensing with synthetic ligands: Systematic 

evaluation of N-acylated homoserine lactones in multiple 

species and new insights into their mechanisms of action, J. 

Am. Chem. Soc, 129, 13613-13625 (2007). 

Benjamin C. Gorske, Brent L. Bastian, Grant D. Geske and 

Helen E. Blackwell, Local and tunable n�� interactions regulate 

amide isomerism in the peptoid backbone, J. Am. 

Chem. Soc, 129, 8928-8929 (2007). 

Ying Ying Chan, Hao Sheng Bian, Theresa May Chin Tan, 

Margrith E. Mattmann, Grant D. Geske, Jun Igarashi, Tomomi 

Hatano, Hiroaki Suga, Helen E. Blackwell and Kim Lee 

Chua, Control of quorum sensing by a Burkholderia pseudo- 

Complexes with Mixed S/ 

N Ligation: Implications for the Active Site of Nickel Superoxide 

Dismutase, Inorg. Chem. (Washington, DC, U. S.), 46, 

8511-8523 (2007). 

Emine Yikilmaz, Jason Porta, Laurie E. Grove, Ardeschir 

Vahedi-Faridi, Yuriy Bronshteyn, Thomas C. Brunold, Gloria 

E. O. Borgstahl and Anne-Frances Miller, How Can a 

Single Second Sphere Amino Acid Substitution Cause Reduction 

Midpoint Potential Changes of Hundreds of Millivolts?, 

J. Am. Chem. Soc, 129, 9927-9940 (2007). 

Martin St. Maurice, Paola Mera, Kiyoung Park, Thomas C. 

Brunold, Jorge C. Escalante-Semerena and Ivan Rayment, 

Structural Characterization of a Human-Type Corrinoid Adenosyltransferase 

Confirms That Coenzyme B12 Is Synthe- 

sized through a Four-Coordinate Intermediate, Biochemistry, 

47, 5755-5766 (2008). 

Kiyoung Park, Paola E. Mera, Jorge C. Escalante-Semerena 

and Thomas C. Brunold, Kinetic and Spectroscopic Studies 

of the ATP:Corrinoid Adenosyltransferase PduO from 

Lactobacillus reuteri: Substrate Specificity and Insights into 

the Mechanism of Co(II)corrinoid Reduction, Biochemistry, 

47, 9007-9015 (2008). 

Jaeheung Cho, Katherine M. Van Heuvelen, Glenn P. A. 

Yap, Thomas C. Brunold and Charles G. Riordan, New Syn- 

thetic Routes to a Disulfidodinickel(II) Complex: Characterization 

and Reactivity of a Ni2(�-�2 :�2 See Biochemistry Section. 

See Medicinal and/or Pharmaceutical Chemistry Section. 

BERRY, JOHN FERGUSON (b.1977) Assistant 

Professor. B.S, 2000, Virginia Tech; B.A, 2000, Virginia 

Tech; Ph.D, 2004, Texas A&M University. Postdoc, 

2004-2006, MPI for Bioinorganic Chemistry. Bioinorganic 

Chemistry; Inorganic Chemistry. Transition Metal 

Chemistry, Coordination Chemistry, Metal-metal bonding, 

High-Valent Metal Ions and Electronic Structure. 

TEL: (608) 262-7534 FAX: (608) 262-6143 

Email: berry@chem.wisc.edu 

Yu-Fei Song, John F. Berry, Eckhard Bill, Eberhard Bothe, 

Thomas Weyhermuller and Karl Wieghardt, Iron complexes 

of new pentadentate ligands containing the 1,4,7-triazacyclo- 

nonane-1,4-diacetate motif. Spectroscopic, electro-, and photochemical 

studies, Inorg. Chem, 46, 2208-2219 (2007). 

Michael Nippe and John F. Berry, Introducing a metalmetal 

multiply bonded group as an “Axial ligand” to iron: 

Synthetic design of a linear Cr-Cr center dot center dot center 

dot Fe framework, J. Am. Chem. Soc, 129, 12684 (2007). 

John F. Berry, Eckhard Bill, Eberhard Bothe, F. Albert 

Cotton, Naresh S. Dalal, Sergey A. Ibragimov, Narpinder 

Kaur, Chun Y. Liu, Carlos A. Murillo, Saritha Nellutla, J. 

Micah North and Dino Villagran, A fractional bond order of 

1/2 in Pd-2(5+)-Formamidinate species; the value of very 

high-field EPR spectra, J. Am. Chem. Soc, 129, 1393-1401 

(2007). 

Jozsef S. Pap, Serena DeBeer George and John F. Berry, 

Delocalized metal-metal and metal-ligand multiple bonding 

in a linear RU-RU N unit: Elongation of a traditionally short 

RU N bond, Angewandte Chemie-International Edition, 47, 

10102-10105 (2008). 

Yu-Fei Song, John F. Berry, Thomas Weyhermueller and 

Eckhard Bill, Bond distances are not always what they ap- 

pear to be: Discovery and un-discovery of the longest Cr(V) 

N triple bond, Dalton Transactions, 1864-1871 (2008). 

Michael Nippe, Eric Victor and John F. Berry, Do metal- 

metal multiply-bonded “ligands” have a trans influence? 

Structural and magnetic comparisons of heterometallic Cr Cr 

center dot center dot center dot Co and Mo Mo center dot 

center dot center dot co interactions, Eur. J. Inorg. Chem, 

5569-5572 (2008). 

Gordon A. Bain and John F. Berry, Diamagnetic corrections 

and Pascal’s constants, J. Chem. Educ, 85, 532-536 

(2008). 

John F. Berry, Serena DeBeer George and Frank Neese, 

Electronic structure and spectroscopy of “superoxidized” 

iron centers in model systems: Theoretical and experimental 

trends, PCCP, 10, 4361-4374 (2008). 

BLACKWELL, HELEN E. (b.1972) Associate Professor. 

B.A, 1994, Oberlin College; Ph.D, 1999, California 

Institute of Technology. Jane Coffin Childs Post-doctoral 

fellow, 1999-2002, Harvard University. Chemical 

Biology; Organic Chemistry. New synthetic methodology; 

combinatorial chemistry; new solid-phase platforms 

for organic synthesis; peptidomimetic design (peptoids); 

chemical biology; bacterial quorum sensing; anti-virulence 

strategies; new antimicrobials; host/microbe crosstalk 

in plant and animal systems. TEL: (608) 262-1503 

FAX: (608) 265-4534 

Web: www.chem.wisc.edu/blackwell/index.html 

Email: blackwell@chem.wisc.edu 

mallei multidrug efflux pump, J. Bacteriol, 189, 4320-4324 

(2007). 

Margrith E. Mattmann, Grant D. Geske, Gregory A. Worzalla, 

Josephine R. Chandler, Kaia J. Sappington, E. Peter 

Greenberg and Helen E. Blackwell, Synthetic ligands that activate 

and inhibit a quorum-sensing regulator in Pseudomonas 

aeruginosa, Bioorg. Med. Chem. Lett, 18, 3072-3075 

(2008). 

Grant D. Geske, Jennifer C. O’Neill and Helen E. Blackwell, 

Expanding dialogues: From natural autoinducers to 

non-natural analogs that modulate quorum sensing in Gramnegative 

bacteria, Chem. Soc. Rev, 37, 1432-1447 (2008). 

Grant D. Geske, Jennifer C. O’Neill, David M. Miller, Rachel 

J. Wezeman, Margrith E. Mattmann, Qi Lin and Helen 

E. Blackwell, Comparative analyses of N-acylated homoserine 

lactones reveal unique structural features that dictate 

their ability to activate or inhibit quorum sensing, ChemBio- 

Chem, 9, 389-400 (2008). 

Sarah A. Fowler, Danielle M. Stacy and Helen E. Blackwell, 

Design and synthesis of macrocyclic peptomers as 

mimics of a quorum sensing signal from Staphylococcus aureus, 

Org. Lett, 10, 2329-2332 (2008). 

B. C. Gorske, The development of new synthetic methods 

and structural paradigms for peptoid architecture. (D) 

G. D. Geske, Design, synthesis, and evaluation of non-native 

acylated homoserine lactones as modulators of quorum 

sensing in gram-negative bacteria. (D) 

J. C. O’Neill, Synthesis of dipeptidic small molecules and 

their evaluation as bacterial modulators. (D) 

M. D. Bowman, The small molecule macroarray synthesis 

platform: Development and applications in chemical biology. 

(D) 

Q. Lin, New avenues and applications for parallel library 

synthesis: I. application of multicomponent reactions for the 

efficient synthesis of small molecule macroarrays. II. characterization 

of non-native ligands as bacterial biofilm modulators. 

(D) 

S. A. Fowler, Design and synthesis of structured and biologically 

active peptoids. (D) 

BRUNOLD, THOMAS C. (b.1969) Professor. Diploma, 

1993, University of Bern, Switzerland; Ph.D, 1996, 

University of Bern, Switzerland. Postdoctoral Fellow, 

1997-1999, Stanford University. Bioinorganic Chemis- 

try; Inorganic Chemistry. Development and application 

of combined spectroscopic/computational methodology 

for structure/function studies of metalloproteins and met- 

al-containing cofactors; elucidation of key reaction steps 

in the biosynthesis and enzymatic Co-C bond activation 

of coenzyme B12; exploration of second-sphere aminoacid 

tuning of active-site properties of the Fe- and Mndependent 

superoxide dismutases; investigation of the 

structure and function of Ni centers in enzymes, cofactors, 

and synthetic complexes. TEL: (608) 265-9056 

FAX: (608) 262-6143 

Web: www.chem.wisc.edu/~brunold/ 

Email: brunold@chem.wisc.edu 

tcbrunold@wisc.edu 

Matthew J. Bierman, Katherine M. Van Heuvelen, Dieter 

Schmeisser, Thomas C. Brunold and Song Jin, Ferromagnetic 

semiconducting EuO nanorods, Adv. Mater. (Weinheim, 

Ger.), 19, 2677-2681 (2007). 

Matthew D. Liptak, Angela S. Fleischhacker, Rowena G. 

Matthews and Thomas C. Brunold, Probing the Role of the 

Histidine 759 Ligand in Cobalamin-Dependent Methionine 

Synthase, Biochemistry, 46, 8024-8035 (2007). 

Brad S. Pierce, Jessica D. Gardner, Lucas J. Bailey, 

-S2) Core, Inorg. 

Chem. (Washington, DC, U. S.), 47, 3931-3933 (2008). 

Laurie E. Grove, Juan Xie, Emine Yikilmaz, Anne-Frances 

Miller and Thomas C. Brunold, Spectroscopic and Computational 

Investigation of Second-Sphere Contributions to Redox 

Tuning in Escherichia coli Iron Superoxide Dismutase, 

Inorg. Chem. (Washington, DC, U. S.), 47, 3978-3992 

(2008). 

Laurie E. Grove, Juan Xie, Emine Yikilmaz, Anush Karapetyan, 

Anne-Frances Miller and Thomas C. Brunold, Spectroscopic 

and Computational Insights into Second-Sphere 

Amino-Acid Tuning of Substrate Analogue/Active-Site Inter- 

actions in Iron(III) Superoxide Dismutase, Inorg. Chem. 

(Washington, DC, U. S.), 47, 3993-4004 (2008). 

Laurie E. Grove, Jason K. Hallman, Joseph P. Emerson, 

Jason A. Halfen and Thomas C. Brunold, Synthesis, X-Ray 

Crystallographic Characterization, and Electronic Structure 

Studies of a Di-Azide Iron(III) Complex: Implications for the 

Azide Adducts of Iron(III) Superoxide Dismutase, Inorg. 


Matthew D. Liptak, Supratim Datta, Rowena G. Matthews 

and Thomas C. Brunold, Spectroscopic Study of the Cobala- 

min-Dependent Methionine Synthase in the Activation Conformation: 

Effects of the Y1139 Residue and S-Adenosylme- 

thionine on the B12 Cofactor, J. Am. Chem. Soc, 130, 16374- 

16381 (2008). 

Laurie E. Grove, Spectroscopic and computational insights 

into second-sphere amino acid tuning of active-site properties 

in iron and manganese superoxide dismutases. (D) 

Matthew D. Liptak, Spectroscopic and computational insights 

into the cofactor activation mechanism of cobalamin- 

dependent methionine synthase. (D) 

BURKE, STEVEN D. (b.1951) Professor. B.S, 1973, 

University of Wisconsin-Eau Claire; Ph.D, 1978, Uni- 

versity of Pittsburgh. Organic Chemistry; Synthesis. To- 

tal synthesis of biologically active natural products, or- 

ganometallics, asymmetric synthesis, catalysis, structureactivity 

relationships, molec. modeling, polyether antibi- 

otics, synthetic macrocyclic ligands, radical-mediated reactions, 

ring-closing metathesis, bioorganic chemistry, 

protein mimics, carbohydrate-protein interactions. TEL: 

(608) 262-4941 FAX: (608) 265-4534 

Web: www.chem.wisc.edu/ 

Email: burke@chem.wisc.edu 

Brian S. Lucas, Vijayagopal Gopalsamuthiram and Steven 

D. Burke, Total synthesis of phorboxazole B, Angew. Chem., 

Int. Ed, 46, 769-772, S769/1-S769/18 (2007). 

Andrew K. Dilger, Vijay Gopalsamuthiram and Steven D. 

Burke, A Two-Directional Approach to a (-)-Dictyostatin 

C11-C23 Segment: Development of a Highly Diastereoselec- 

tive, Kinetically-Controlled Meerwein-Ponndorf-Verley Re- 

duction, J. Am. Chem. Soc, 129, 16273-16277 (2007). 

Christopher C. Marvin, Alexander J. L. Clemens and Ste- 

ven D. Burke, Synthesis of Thromboxane B2 via Ketalization/Ring-Closing 

Metathesis, Org. Lett, 9, 5353-5356 

(2007). 

Christopher C. Marvin, Eric A. Voight and Steven D. 

Burke, Synthesis of (+)-Didemniserinolipid B via Ketalization/Ring-Closing 

Metathesis, Org. Lett, 9, 5357-5359 

(2007). 

Christopher C. Marvin, Eric A. Voight, Judy M. Suh, 

Christopher L. Paradise and Steven D. Burke, Synthesis of 

(+)-Didemniserinolipid B: Application of a 2-Allyl-4- 

fluorophenyl Auxiliary for Relay Ring-Closing Metathesis, J. 

Org. Chem, 73, 8452-8457 (2008). 

J. M. Strasser, The total synthesis of membranacin. (M) 

Grant D. Geske, Jennifer C. O’Neill and Helen E. Black- Thomas C. Brunold and Brian G. Fox, Characterization of L. M. Wysocki, The total synthesis of trilobacin and inveswell, 

N-Phenylacetanoyl-L-homoserine lactones can strongly the Nitrosyl Adduct of Substrate-Bound Mouse Cysteine Di- tigation of the synthesis of phorboxazole B. (D)

2 WISCONSIN, MADISON 

M. W. Dodge, Synthesis of annonaceous acetogenins via 

asymmetric double cycloetherification. (D) 

S. H. Seradj, Towards the total synthesis of bryostatin 1: 

Synthesis of the northern fragment (c1-c16). (D) 

V. L. Wilde, Synthetic efforts toward the total synthesis of 

bryostatin 1: Emphasis on the C17-C27 fragment. (D) 

BURSTYN, JUDITH N. (b.1959) Professor. B.A, 

1980, Cornell University; Ph.D, 1986, University of California, 

Los Angeles. Research Associate, 1986-1987, 

University of California, Los Angeles (U.C.L.A.), 

School of Medicine; American Cancer Society Fellow- 

ship, 1987-1989, Massachusetts Institute of Technology 

(MIT). Bioinorganic Chemistry; Inorganic Chemistry. 

Metalloprotein structure and function; biological roles of 

nitric oxide, carbon monoxide and ethylene; heme protein 

and small molecule gas sensors; spectroscopy of 

heme proteins; allostery; coordination chemistry. TEL: 

(608) 262-0328 FAX: (608) 262-6143 

Web: www.chem.wisc.edu/~burstyn 

Email: burstyn@chem.wisc.edu 

Melisa M. Cherney, Samuel Pazicni, Nina Frank, Katherine 

A. Marvin, Jan P. Kraus and Judith N. Burstyn, Ferrous 

Human Cystathionine �-Synthase Loses Activity during Enzyme 

Assay Due to a Ligand Switch Process, Biochemistry, 

46, 13199-13210 (2007). 

Bhavesh A. Gandhi, Omar Green and Judith N. Burstyn, 

Facile Oxidation-Based Synthesis of Sterically Encumbered 

Four-Coordinate Bis(2,9-di-tert-butyl-1,10-phenanthroline) 

copper(I) and Related Three-Coordinate Copper(I) Complexes, 

Inorg. Chem. (Washington, DC, U. S.), 46, 3816- 

3825 (2007). 

Robert W. Clark, Hwan Youn, Andrea J. Lee, Gary P. 

Roberts and Judith N. Burstyn, DNA binding by an imidazole-sensing 

CooA variant is dependent on the heme redox 

state, JBIC, J. Biol. Inorg. Chem, 12, 139-146 (2007). 

Katherine A. Marvin, Robert L. Kerby, Hwan Youn, Gary 

P. Roberts and Judith N. Burstyn, The Transcription Regulator 

RcoM-2 from Burkholderia xenovorans Is a Cysteine-Ligated 

Hemoprotein That Undergoes a Redox-Mediated Ligand 

Switch, Biochemistry, 47, 9016-9028 (2008). 

Ta-Sheng Andrew Tseng and Judith N. Burstyn, Synthesis 

and DNA cleavage activity of a bifunctional intercalatorlinked 

copper(II) macrocycle, Chem. Commun, 6209-6211 

(2008). 

Andrea J. Lee, The biophysical characterization of the 

three activation states of CooA through protein unfolding 

studies. (D) 

Bhavesh A. Gandhi, Development of copper(I)-2,9-di-tertbutyl-1,10-phenanthroline 

chemistry and applications thereof. 

(D) 

Katherine A. Marvin, Characterization of redox- and gasresponsive 

heme-thiolate proteins. (D) 

Melisa M. Cherney, Studies of the heme proteins soluble 

guanylyl cyclase and cystathionine beta-synthase. (D) 

CASEY, CHARLES P. (b.1942) Emeritus Professor. 

B.S, 1963, St. Louis University; Ph.D, 1968, Mass. Institute 

of Technology. NSF Fellowship, 1968, Harvard University. 

Organic Chemistry; Organometallic Chemistry. 

Mechanism of organometallic reactions; metal-alkyl-alkene 

complexes; homogeneous hydrogenation catalysts; 

hydroformylation; metal carbene complexes; reduction 

of carbon monoxide. TEL: (608) 262-0584 FAX: (608) 

262-7144 

Web: www.chem.wisc.edu/main/people/faculty/casey. 

html 

Email: casey@chem.wisc.edu 

9918 

Web: www.chem.wisc.edu/users/cavagner 

Email: cavagnero@chem.wisc.edu 

Robert N. Kirchdoerfer, Joseph J.-T. Huang, Molly K. Isola 

and Silvia Cavagnero, Fluorescence-based analysis of ami- 

noacyl- and peptidyl-tRNA by low-pH sodium dodecyl sulfate-polyacrylamide 

gel electrophoresis, Anal. Biochem, 364, 

92-94 (2007). 

Jamie P. Ellis, Courtney K. Bakke, Robert N. Kirchdoer- 

fer, Lisa M. Jungbauer and Silvia Cavagnero, Chain Dynam- 

ics of Nascent Polypeptides Emerging from the Ribosome, 

ACS Chem. Biol, 3, 555-566 (2008). 

Nese Kurt and Silvia Cavagnero, Nonnative helical motif 

in a chaperone-bound protein fragment, Biophys. J, 94, L48- 

L50 (2008). 

Nese Kurt, Bryan C. Mounce, Paul A. Ellison and Silvia 

Cavagnero, Residue-Specific Contact Order and Contact 

Breadth in Single-Domain Proteins: Implications for Folding 

as a Function of Chain Elongation, Biotechnol. Prog, 24, 

570-575 (2008). 

Ye-Jin Eun, Nese Kurt, Ashok Sekhar and Silvia Cavagnero, 

Thermodynamic and Kinetic Characterization of 

ApoHmpH, a Fast-Folding Bacterial Globin, J. Mol. Biol, 

376, 879-897 (2008). 

C. K. Bakke, Apomyoglobin expression and chain length- 

dependent association with cotranslationally active chaperones 

in E. Coli cell-free systems. (M) 

L. M. Jungbauer, Cotranslational protein folding: Development 

of novel biophysical approaches. (D) 

S. Rajagopalan, Conformation and dynamics of apomyo- 

globin N-Terminal fragments in the presence of dnak chaper- 

one: Implications for protein folding. (D) 

COON, JOSHUA J. (b.1976) Assistant Professor. B.S, 

1998, Central Michigan University; Ph.D, 2002, Univer- 

sity of Florida. NIH-NRSA Fellow, 2003-2005, University 

of Virginia. Analytical Chemistry; Mass Spectrometry. 

Mass spectrometry, biology, embryonic stem cells, 

proteomics and analytical chemistry. TEL: (608) 263- 

1718 FAX: (608) 262-0453 

Web: www.chem.wisc.edu/~coon/ 

Email: jcoon@chem.wisc.edu 

Danielle L. Swaney, Graeme C. McAlister, Matthew Wirtala, 

Jae C. Schwartz, John E. P. Syka and Joshua J. Coon, 

Supplemental Activation Method for High-Efficiency Electron-Transfer 

Dissociation of Doubly Protonated Peptide Precursors, 

Anal. Chem, 79, 477-485 (2007). 

Graeme C. McAlister, Doug Phanstiel, David M. Good, W. 

Travis Berggren and Joshua J. Coon, Implementation of 

Electron-Transfer Dissociation on a Hybrid Linear Ion Trap- 

Orbitrap Mass Spectrometer, Anal. Chem. (Washington, DC, 

U. S.), 79, 3525-3534 (2007). 

D. Keith Williams, Jr., Graeme C. McAlister, David M. 

Good, Joshua J. Coon and David C. Muddiman, Dual Electrospray 

Ion Source for Electron-Transfer Dissociation on a 

Hybrid Linear Ion Trap-Orbitrap Mass Spectrometer, Anal. 


Bruce A. Julian, Stefan Wittke, Jan Novak, David M. 

Good, Joshua J. Coon, Markus Kellmann, Petra Zurbig, Eric 

Schiffer, Marion Haubitz, Zina Moldoveanu, Shannon M. 

Calcatera, Robert J. Wyatt, Josef Sykora, Eva Sladkova, Ondrej 

Hes, Harald Mischak and Brendan M. McGuire, Electrophoretic 

methods for analysis of urinary polypeptides in IgA- 

associated renal diseases, Electrophoresis, 28, 4469-4483 

(2007). 

Silvia Lecchi, Clark J. Nelson, Kenneth E. Allen, Danielle 

L. Swaney, Katie L. Thompson, Joshua J. Coon, Michael R. 

Sussman and Carolyn W. Slayman, Tandem Phosphorylation 

of Ser-911 and Thr-912 at the C Terminus of Yeast Plasma 

Membrane H 

Yamamoto, Clinical proteomics: A need to define the field 

and to begin to set adequate standards, Proteomics Clinical 

Applications, 1, 148-156 (2007). 

J. Brumbaugh, P. Phanstiel and J. J. Coon, Unraveling the 

Histone’s potential: A proteomics perspective, Epigenetics, 

3, 1-4 (2008). 

B. L. Frey, C. J. Krusemark, A. R. Ledvina, G. C. McAlis- 

ter, J. J. Coon, P. J. Belshaw and L. M. Smith, Ion-ion reactions 

with fixed-charge modified proteins to produce ions in 

a single, very high charge state, International Journal of 

Mass Spectrometry, 276, 136-143 (2008). 

G. C. McAlister, S. E. Beetner and J. J. Coon, In vacuo 

formation of peptide-metal coordination complexes, International 

Journal of Mass Spectrometry, 276, 149-152 (2008). 

Shane L. Hubler, April Jue, Jason Keith, Graeme C. McAlister, 

Gheorghe Craciun and Joshua J. Coon, Valence Parity 

Renders z -Type Ions Chemically Distinct, J. Am. Chem. Soc, 

130, 6388-6394 (2008). 

Doug Phanstiel, Yi Zhang, Jarrod A. Marto and Joshua J. 

Coon, Peptide and Protein Quantification Using iTRAQ with 

Electron Transfer Dissociation, J. Am. Soc. Mass Spectrom, 

19, 1255-1262 (2008). 

Graeme C. McAlister, W. Travis Berggren, Jens Griep- 

Raming, Stevan Horning, Alexander Makarov, Doug Phanstiel, 

George Stafford, Danielle L. Swaney, John E. P. Syka, 

Vlad Zabrouskov and Joshua J. Coon, A Proteomics Grade 

Electron Transfer Dissociation-Enabled Hybrid Linear Ion 

Trap-Orbitrap Mass Spectrometer, J. Proteome Res, 7, 3127- 

3136 (2008). 

K. Rossing, H. Mischak, M. Dakna, P. Zürbig, J. Novak, 

B. A. Julian, D. M. Good, J. J. Coon, L. Tarnow and P. Rossing, 

Urinary proteomics in diabetes and CKD, Journal of the 

American Society of Nephrology, 19, 1283-1290 (2008). 

Lukas U. Zimmerli, Eric Schiffer, Petra Zurbig, David M. 

Good, Markus Kellmann, Laetitia Mouls, Andrew R. Pitt, 

Joshua J. Coon, Roland E. Schmieder, Karlheinz H. Peter, 

Harald Mischak, Walter Kolch, Christian Delles and Anna F. 

Dominiczak, Urinary proteomic biomarkers in coronary ar- 

tery disease, Mol. Cell. Proteomics, 7, 290-298 (2008). 

D. L. Swaney, G. C. McAlister and J. J. Coon, Decision 

tree driven tandem mass spectrometry for shotgun proteom- 

ics, Nature Methods, 5, 959-964 (2008). 

Doug Phanstiel, Justin Brumbaugh, W. Travis Berggren, 

Kevin Conard, Xuezhu Feng, Mark E. Levenstein, Graeme 

C. McAlister, James A. Thomson and Joshua J. Coon, Mass 

spectrometry identifies and quantifies 74 unique histone H4 

isoforms in differentiating human embryonic stem cells, 

Proc. Natl. Acad. Sci. U. S. A, 105, 4093-4098 (2008). 

Dan Theodorescu, Eric Schiffer, Hartwig W. Bauer, Fried- 

rich Douwes, Frank Eichhorn, Reinhard Polley, Thomas 

Schmidt, Wolfgang Schofer, Petra Zurbig, David M. Good, 

Joshua J. Coon and Harald Mischak, Discovery and valida- 

tion of urinary biomarkers for prostate cancer, Proteomics: 

Clin. Appl, 2, 556-570 (2008). 

Joshua J. Coon, Petra Zurbig, Mohammed Dakna, Anna F. 

Dominiczak, Stephane Decramer, Danilo Fliser, Moritz 

Frommberger, Igor Golovko, David M. Good, Stefan Herget- 

Rosenthal, Joachim Jankowski, Bruce A. Julian, Markus 

Kellmann, Walter Kolch, Ziad Massy, Jan Novak, Kasper 

Rossing, Joost P. Schanstra, Eric Schiffer, Dan Theodorescu, 

Raymond Vanholder, Eva M. Weissinger, Harald Mischak 

and Philippe Schmitt-Kopplin, CE-MS analysis of the human 

urinary proteome for biomarker discovery and disease diag- 

nostics, Proteomics: Clin. Appl, 2, 964-973 (2008). 

CRIM, F. FLEMING (b.1947) Professor. B.S, 1969, 

Southwestern University; Ph.D, 1974, Cornell University. 

Director’s Postdoctoral Appointee, 1976-1977, Los 

Alamos National Laboratory. Chemical Physics; Physical 

Chemistry. Experimental molecular reaction dynam- 

+-ATPase 

Charles P. Casey, Timothy B. Clark and Ilia A. Guzei, Intramolecular 

trapping of an intermediate in the reduction of 

Imines by a hydroxycyclopentadienyl ruthenium hydride: 

Support for a concerted outer sphere mechanism, J. Am. 

Chem. Soc, 129, 11821-11827 (2007). 

Charles P. Casey and Hairong Guan, An efficient and chemoselective 

iron catalyst for the hydrogenation of ketones, J. 

Am. Chem. Soc, 129, 5816 (2007). 

Charles P. Casey, Sharon E. Beetner and Jeffrey B. Johnson, 

Spectroscopic determination of hydrogenation rates and 

intermediates during carbonyl hydrogenation catalyzed by 

Shvo’s hydroxycyclopentadienyl diruthenium hydride agrees 

with kinetic modeling based on independently measured rates 

of elementary reactions, J. Am. Chem. Soc, 130, 2285-2295 

(2008). 

Leads to Glucose-dependent Activation, 

J. Biol. Chem, 282, 35471-35481 (2007). 

David M. Good, Visith Thongboonkerd, Jan Novak, Jean- 

Loup Bascands, Joost P. Schanstra, Joshua J. Coon, Anna 

Dominiczak and Harald Mischak, Body Fluid Proteomics for 

Biomarker Discovery: Lessons from the Past Hold the Key to 

Success in the Future, J. Proteome Res, 6, 4549-4555 (2007). 

David M. Good, Matthew Wirtala, Graeme C. McAlister 

and Joshua J. Coon, Performance characteristics of electron 

transfer dissociation mass spectrometry, Mol. Cell. Proteomics, 

6, 1942-1951 (2007). 

Nelly Khidekel, Scott B. Ficarro, Peter M. Clark, Marian 

C. Bryan, Danielle L. Swaney, Jessica E. Rexach, Yi E. Sun, 

Joshua J. Coon, Eric C. Peters and Linda C. Hsieh-Wilson, 

Probing the dynamics of O-GlcNAc glycosylation in the 

brain using quantitative proteomics, Nat. Chem. Biol, 3, 339- 

ics in gases and liquids; reaction, energy transfer and 

photodissociation of molecules prepared by laser excita- 

tion; vibrational state control of reactions using high resolution 

and ultrashort laser pulses. TEL: (608) 263-7364 

FAX: (608) 262-9918 

Web: www.chem.wisc.edu/~crim 

Email: fcrim@chem.wisc.edu 

F. Fleming Crim, Making Energy Count, Science (Washington, 

DC, U. S.), 316, 1707-1708 (2007). 

Y. Heidi Yoon, Michael L. Hause, Amanda S. Case and F. 

Fleming Crim, Vibrational action spectroscopy of the C-H 

and C-D stretches in partially deuterated formic acid dimer, 

J. Chem. Phys, 128, 084305/1-084305/6 (2008). 

Michael L. Hause, Y. Heidi Yoon, Amanda S. Case and F. 

Fleming Crim, Dynamics at conical intersections: The influ- 

348 (2007). 

ence of O-H stretching vibrations on the photodissociation of 

CAVAGNERO, SILVIA (b.1962) Associate Professor. 

B.S, 1988, La Sapienza University, Rome Italy; 

M.S, 1990, University of Arizona; Ph.D, 1996, California 

Institute of Technology. AAUW and Wills Found. 

Postdoctoral Fellow, 1996-1999, Scripps Research Insti- 

tute. Biophysics/Biophysical Chemistry; Physical Chemistry. 

Protein folding in vitro and in the cell; chaperoneassisted 

protein folding and misfolding; fundamental 

noncovalent interactions and their role in protein structure/folding; 

multidimensional NMR spectroscopy; frequency 

domain fluorescence spectroscopy; MALDI mass 

spectrometry. TEL: (608) 262-5430 FAX: (608) 262- 

An Chi, Curtis Huttenhower, Lewis Y. Geer, Joshua J. 

Coon, John E. P. Syka, Dina L. Bai, Jeffrey Shabanowitz, 

Daniel J. Burke, Olga G. Troyanskaya and Donald F. Hunt, 

Analysis of phosphorylation sites on proteins from saccharomyces 

cerevisiae by electron transfer dissociation (ETD) 

mass spectrometry, Proc. Natl. Acad. Sci. U. S. A, 104, 2193- 

2198 (2007). 

H. Mischak, R. Apweiler, R. E. Banks, M. Conaway, J. 

Coon, A. Dominiczak, J. H. H. Ehrich, D. Fliser, M. Girolami, 

H. Hermjakob, D. Hochstrasser, J. Jankowskii, B. A. Julian, 

W. Kolch, Z. A. Massy, C. Neusuess, J. Novak, K. Peter, 

K. Rossing, J. Schanstra, O. J. Semmes, D. Theodorescu, 

V. Thongboonkerd, E. M. Weissinger, J. E. Van Eyk and T. 

phenol, J. Chem. Phys, 128, 104307/1-104307/8 (2008). 

Andrew C. Crowther, Stacey L. Carrier, Thomas J. Preston 

and F. Fleming Crim, Time-resolved studies of CN radical 

reactions and the role of complexes in solution, J. Phys. 

Chem. A, 112, 12081-12089 (2008). 

Christopher J. Annesley, Andrew E. Berke and F. Fleming 

Crim, Reaction Dynamics and Vibrational Spectroscopy of 

CH3D Molecules with Both C-H and C-D Stretches Excited, 

J. Phys. Chem. A, 112, 9448-9453 (2008). 

Michael L. Hause, Y. Heidi Yoon and F. Fleming Crim, 

Vibrationally mediated photodissociation of ammonia: Prod- 

uct angular distributions from adiabatic and nonadiabatic dis- 

sociation, Molecular Physics, 106, 1127-1133 (2008).


F. Fleming Crim, Chemical reaction dynamics, Proc. Natl. 

Acad. Sci. U. S. A, 105, 12647-12648 (2008). 

F. Fleming Crim, Chemical dynamics of vibrationally excited 

molecules: controlling reactions in gases and on surfaces, 

Proc. Natl. Acad. Sci. U. S. A, 105, 12654-12661 

(2008). 

Andrew C. Crowther, Time-resolved studies of CN radical 

reactions and the role of complexes in solution. (D) 

Michael L. Hause, Influence of vibrations on passage 

through conical intersections: Velocity map imaging of the 

photodissociation of ammonia and phenol. (D) 

CUI, QIANG (b.1975) Associate Professor. B.Sc, 

1993, USTC, P. R. China; Ph.D, 1997, Emory Univ. 

Postdoc, 1998-2001, Harvard Univ. Biophysics/Biophysical 

Chemistry; Theoretical Chemistry. Our research tarlarge 

conductance, II: systematic study of conformational 

transitions, Biophys. J, 95, 581-596 (2008). 

Jejoong Yoo and Qiang Cui, Does arginine remain protonated 

in the lipid membrane? Insights from microscopic pKa 

calculations, Biophys. J, 94, L61-L63 (2008). 

Y. Tang, Jejoong Yoo, Arun Yethiraj, Qiang Cui and Xi 

Chen, Mechanosensitive channels: Insights from continuumbased 

simulations, Cell Biochem. & Biophys, 52, 1-18 

(2008). 

Charles P. Casey, Jeffrey B. Johnson, Seven W. Singer and 

Qiang Cui, Hydrogen elimination from a hydroxycyclopenta- 

dienyl ruthenium(II) hydride: Study of hydrogen activation in 

a ligand-metal bifunctional hydrogenation catalyst. [Erratum 

to document cited in CA142:373963], J. Am. Chem. Soc, 

130, 1110 (2008). 

Justin M. Hoerter, Karin M. Otte, Samuel H. Gellman, 

Qiang Cui and Shannon S. Stahl, Discovery and Mechanistic 

Study of Al 

surfaces; deformation-induced mobility; anomalously 

fast crystal growth from glasses; NMR spectroscopy; vapor 

deposition. TEL: (608) 262-7273 FAX: (608) 262- 

0381 

Web: www.chem.wisc.edu/~ediger 

Email: ediger@chem.wisc.edu 

Kenneth L. Kearns, Stephen F. Swallen, M. D. Ediger, 

Tian Wu and Lian Yu, Influence of substrate temperature on 

the stability of glasses prepared by vapor deposition, J. 

Chem. Phys, 127, 154702 (2007). 

Paul A. Bonvallet, Caroline J. Breitkreuz, Yong Seol Kim, 

Eric M. Todd, Katherine Traynor, Charles G. Fry, M. D. Edi- 

ger and Robert J. McMahon, Organic glass-forming materi- 

als: 1,3,5-tris(naphthyl)benzene derivatives, J. Org. Chem, 

72, 10051-10057 (2007). 

Liang Zhang, T. R. Lutz, Junshu Zhao and M. D. Ediger, 

Molecular weight dependence of polystyrene segmental dy- 

III gets the development and applications of computational 

tools that explore the mechanisms of complex molecules. 

Enzymes and biological machines involved in bioenergy 

transductions are of primary interest. Two areas under 

development involve QM/MM methods for exploring 

free energies of enzymes, and coarse-grained methods 

for probing long-time behavior of macromolecules. Systems 

under study include molecular motors, ion pumps 

as well as biomolecules involved in membrane fusion. 

TEL: (608) 262-9801 FAX: (608) 262-9918 

Web: www.chem.wisc.edu/users/cui 

Email: cui@chem.wisc.edu 

Liang Ma and Qiang Cui, Activation Mechanism of a Signaling 

Protein at Atomic Resolution from Advanced Computations, 

J. Am. Chem. Soc, 129, 10261-10268 (2007). 

Dingguo Xu, Hua Guo and Qiang Cui, Antibiotic Deactivation 

by a Dizinc �-Lactamase: Mechanistic Insights from 

QM/MM and DFT Studies, J. Am. Chem. Soc, 129, 10814- 

10822 (2007). 

Denis A. Kissounko, Justin M. Hoerter, Ilia A. Guzei, 

Qiang Cui, Samuel H. Gellman and Shannon S. Stahl, Ti 

-Catalyzed Transamidation of Tertiary Amides, 

J. Am. Chem. Soc, 130, 647-654 (2008). 

Haibo Yu and Qiang Cui, The vibrational spectra of protonated 

water clusters: A benchmark for self-consistent- 

charge density-functional tight binding, J. Chem. Phys, 127, 

234504/1-234504/8 (2008). 

Yang Yang, Haibo Yu, Darrin York, Marcus Elstner and 

Qiang Cui, Description of phosphate hydrolysis reactions 

with the Self-Consistent-Charge Density-Functional-Tight- 

Binding (SCC-DFTB) theory. 1. Parameterization, J. Chem. 

Theo. Comp, 4, 2067-2084 (2008). 

Yang Yang, Haibo Yu and Qiang Cui, Extensive Conformational 

Transitions Are Required to Turn On ATP Hydrolysis 

in Myosin, J. Mol. Biol, 381, 1407-1420 (2008). 

Xiao Zhu, Peter Koenig, Samuel H. Gellman, Arun Yethi- 

raj and Qiang Cui, Establishing Effective Simulation Proto- 

cols for �- and �/�-Peptides. II. Molecular Mechanical 

(MM) Model for a Cyclic �-Residue, J. Phys. Chem. B, 112, 

5439-5448 (2008). 

Nilanjan Ghosh and Qiang Cui, pKa of Residue 66 in 

Staphylococcal nuclease. I. Insights from QM/MM Simulations 

with Conventional Sampling, J. Phys. Chem. B, 112, 

namics in dilute blends with poly(vinyl methyl ether), Journal 

of Polymer Science Part B-Polymer Physics, 45, 2252- 

2262 (2007). 

Robert A. Riggleman, Hau-Nan Lee, M. D. Ediger and 

Juan J. De Pablo, Free volume and finite-size effects in a 

polymer glass under stress, Phys. Rev. Lett, 99, 215501 

(2007). 

Stephen F. Swallen, Kenneth L. Kearns, Marie K. Mapes, 

Yong Seol Kim, Robert J. McMahon, M. D. Ediger, Tian 

Wu, Lian Yu and Sushil Satija, Organic glasses with exceptional 

thermodynamic and kinetic stability, Science, 315, 

353-356 (2007). 

Stephen F. Swallen, Kenneth L. Kearns, Sushil Satija, 

Katherine Traynor, Robert J. McMahon and M. D. Ediger, 

Molecular view of the isothermal transformation of a stable 

glass to a liquid, J. Chem. Phys, 128, 214524 (2008). 

M. D. Ediger, Peter Harrowell and Lian Yu, Crystal 

growth kinetics exhibit a fragility-dependent decoupling 

from viscosity, J. Chem. Phys, 128, 034709 (2008). 

Hau-Nan Lee, Keewook Paeng, Stephen F. Swallen and M. 

D. Ediger, Dye reorientation as a probe of stress-induced mo- 

IV- 

Mediated Reactions between Primary Amines and Secondary 

Carboxamides: Amidine Formation Versus Transamidation, 

J. Am. Chem. Soc, 129, 1776-1783 (2007). 

Xiao Zhu, Arun Yethiraj and Qiang Cui, Establishing effective 

simulation protocols for �- and �/�-mixed peptides. 

I. QM and QM/MM models, J. Chem. Theory Comput, 3, 

1538-1549 (2007). 

Kwangho Nam, Qiang Cui, Jiali Gao and Darrin M. York, 

Specific Reaction Parametrization of the AM1/d Hamiltonian 

for Phosphoryl Transfer Reactions: H, O, and P Atoms, J. 

Chem. Theory Comput, 3, 486-504 (2007). 

Yang Yang, Haibo Yu, Darrin York, Qiang Cui and Marcus 

Elstner, Extension of the Self-Consistent-Charge Density-Functional 

Tight-Binding Method: Third-Order Expansion 

of the Density Functional Theory Total Energy and Introduction 

of a Modified Effective Coulomb Interaction, J. Phys. 

Chem. A, 111, 10861-10873 (2007). 

Dingguo Xu, Hua Guo and Qiang Cui, Antibiotic Binding 

to Dizinc �-Lactamase L1 from Stenotrophomonas maltophilia: 

SCC-DFTB/CHARMM and DFT Studies, J. Phys. Chem. 

A, 111, 5630-5636 (2007). 

Demian Riccardi and Qiang Cui, pKa Analysis for the 

Zinc-Bound Water in Human Carbonic Anhydrase II: Benchmark 

for “Multiscale” QM/MM Simulations and Mechanistic 

Implications, J. Phys. Chem. A, 111, 5703-5711 (2007). 

Zheng-Li Cai, Philip Lopez, Jeffrey R. Reimers, Qiang Cui 

and Marcus Elstner, Application of the Computationally Efficient 

Self-Consistent-Charge Density-Functional Tight-Binding 

Method to Magnesium-Containing Molecules, J. Phys. 

Chem. A, 111, 5743-5750 (2007). 

Yang Yang and Qiang Cui, Interactions between Phosphate 

and Water in Solution: A Natural Bond Orbital Based 

Analysis in a QM/MM Framework, J. Phys. Chem. B, 111, 

3999-4002 (2007). 

Haibo Yu, Liang Ma, Yang Yang and Qiang Cui, Mechanochemical 

coupling in the myosin motor domain. I. Insights 

from equilibrium active-site simulations, PLoS Comput. Biol, 

3, 199-213 (2007). 

Haibo Yu, Liang Ma, Yang Yang and Qiang Cui, Mechanochemical 

coupling in the myosin motor domain. II. Analysis 

of critical residues, PLoS Comput. Biol, 3, 214-230 

(2007). 

Dmitry A. Kondrashov, Adam W. Van Wynsberghe, Ryan 

M. Bannen, Qiang Cui and George N. Phillips, Protein Structural 

Variation in Computational Models and Crystallographic 

Data, Structure (Cambridge, MA, U. S.), 15, 169-177 

(2007). 

Dmitry A. Kondrashov, Adam W. Van Wynsberghe, Ryan 

M. Bannen, Qiang Cui and George N. Phillips, Protein structural 

variation in computational models and crystallographic 

data. [Erratum to document cited in CA146:312169], Structure 

(Cambridge, MA, U. S.), 15, 637 (2007). 

Demian Riccardi, Peter Koenig, Hua Guo and Qiang Cui, 

8387-8397 (2008). 

Prasad Phatak, Nilanjan Ghosh, Haibo Yu, Qiang Cui and 

Marcus Elstner, Amino acids with an intermolecular proton 

bond as the proton storage site in bacteriorhodopsin, Proc. 

Natl. Acad. Sci. USA, 105, 19672-19677 (2008). 

Qiang Cui and Martin Karplus, Allostery and cooperativity 

revisited, Protein Sci, 17, 1295-1307 (2008). 

Junjun Yu, Microscopic pKa calculations using QM/MM 

free energy perturbation. (M) 

Yang Yang, Theoretical study of phosphate hydrolysis reactions: 

Method Improvement, validation and application. 

(D) 

DAHL, LAWRENCE F. (b.1929) Emeritus Professor. 

B.S, 1951, University of Louisville; Ph.D, 1956, Iowa 

State University. Inorganic Chemistry. Large (nanosized) 

homo-/heteronuclear transition metal clusters (as 

potential catalytic precursors), their Synthesis and crys- 

tallographic/spectroscopic/electrochemical characteriza- 

tion. New materials, nanoscience. TEL: (608) 263-2209 

FAX: (608) 262-6143 

Web: www.chem.wisc.edu/people/profiles/Dahl.php 

Email: dahl@chem.wisc.edu 

Evgueni G. Mednikov, Matthew C. Jewell and Lawrence 

F. Dahl, Nanosized (mu(12)-Pt)Pd164-xPtx(CO)(72)(PPh3) 

(20) (x approximate to 7) containing Pt-centered four-shell 

165-atom Pd-Pt core with unprecedented intershell bridging 

carbonyl ligands: Comparative analysis of icosahedral shellgrowth 

patterns with geometrically related Pd-145(CO)(x) 

(PEt3)(30) (x approximate to 60) containing capped threeshell 

Pd-145 core, J. Am. Chem. Soc, 129, 11619-11630 

(2007). 

Evgueni G. Mednikov, Nguyet T. Tran, Nicholas L. Aschbrenner 

and Lawrence F. Dahl, Nanosized Au4Pd28(CO)(22) 

(PMe3)(16) containing 32-atom Au4Pd28 core-geometry 

with nearly regular encapsulated Au-4 tetrahedron: Proposed 

multitwinned-composite growth-pattern involving four interpenetrating 

Au-centered cuboctahedral-based three-layer 

(Pd-3)(A)(AuPd6)(B)(Au-3)(C) polyhedra, J. Cluster Sci, 18, 

253-269 (2007). 

Evgueni G. Mednikov and Lawrence F. Dahl, Nanosized 

Pd-37(CO)(28){P(p-Tolyl)(3)}(12) containing geometrically 

unprecedented central 23-atom interpenetrating tri-icosahe- 

dral palladium kernel of double icosahedral units: its postulated 

metal-core evolution and resulting stereochemical implications, 

J. Am. Chem. Soc, 130, 14813-14821 (2008). 

Evgueni G. Mednikov and Lawrence F. Dahl, Crystallographically 

proven nanometer-sized gold thiolate cluster 

Au102(SR)44: Its unexpected molecular anatomy and resulting 

stereochemical and bonding consequences, small, 4, 534- 

537 (2008). 

bility in polymer glasses, J. Chem. Phys, 128, 134902 (2008). 

Kenneth L. Kearns, Stephen F. Swallen, M. D. Ediger, 

Tian Wu, Ye Sun and Lian Yu, Hiking down the energy 

landscape: Progress toward the Kauzmann temperature via 

vapor deposition, J. Phys. Chem. B, 112, 4934-4942 (2008). 

Ye Sun, Hanmi Xi, Shuang Chen, M. D. Ediger and Lian 

Yu, Crystallization near glass transition: Transition from dif- 

fusion-controlled to diffusionless crystal growth studied with 

seven polymorphs, J. Phys. Chem. B, 112, 5594-5601 (2008). 

Ye Sun, Hanmi Xi, M. D. Ediger and Lian Yu, Diffu- 

sionless crystal growth from glass has precursor in equilibrium 

liquid, J. Phys. Chem. B, 112, 661-664 (2008). 

Junshu Zhao, Liang Zhang and M. D. Ediger, Poly(ethylene 

oxide) dynamics in blends with poly(vinyl acetate): 

Comparison of segmental and terminal dynamics, Macromolecules, 

41, 8030-8037 (2008). 

FARRAR, THOMAS C. Emeritus Professor. TEL: 

(608) 262-6158 FAX: (608) 262-3160 

Jennifer A. Goodnough, Lauren Goodrich and Thomas C. 

Farrar, Dynamics of Dilute Water in Carbon Tetrachloride, J. 

Phys. Chem. A, 111, 6146-6150 (2007). 

FREDRICKSON, DANIEL (b.1979) Assistant Pro- 

fessor. AAS, 1998, Bellevue Community College; B.Sc, 

2000, University of Washington; Ph.D, 2005, Cornell 

University. Post-doctoral fellow, 2005-2008, Stockholm 

University. Solid State Chemistry; Theoretical Chemistry. 

The application of theoretical, synthetic and crystal- 

lographic methods toward qualitative explanations for 

the puzzling and complex structural features arising in 

intermetallic phases and quasicrystals. TEL: (608) 890- 

1567 FAX: (608) 262-6143 

Web: www.chem.wisc.edu/~danny/ 

Email: danny@chem.wisc.edu 

Mark S. Bailey, Daniel Y. Shen, Michael A. McGuire, 

Daniel C. Fredrickson, Brian H. Toby, Francis J. DiSalvo, 

Hisanori Yamane, Shinya Sasaki and Masahiko Shimada, 

The indium subnitrides Ae6In4(InxLiy)N3-z (Ae = Sr and Ba), 

Inorg. Chem, 44, 6680-6690 (2005). 

Thomas Devic, Min Yuan, Judy Adams, Daniel C. Fredrickson, 

Stephen Lee and D. Venkataraman, The maximin 

principle of �-radical packings, J. Amer. Chem. Soc, 127, 

14616-14627 (2005). 

Peter Michael Clark, Stephen Lee and Daniel C. Fredrick- 

son, Transition metal AB3 intermetallics: Structure maps 

based on quantum mechanical stability, J. Solid State Chem, 

178, 1269-1283 (2005). 

Daniel C. Fredrickson, Stephen Lee and Roald Hoffmann, 

Interpenetrating polar and non-polar sublattices in intermetal- 

lics: The NaCd2 structure, Angew. Chem. Int. Ed, 46, 1958- 

1976 (2007). 

Proton Transfer in Carbonic Anhydrase Is Controlled by 

Electrostatics Rather than the Orientation of the Acceptor, 

Biochemistry, 47, 2369-2378 (2008). 

Xi Chen, Qiang Cui, Yuye Tang, Jejoong Yoo and Arun 

Yethiraj, Gating mechanisms of mechanosensitive channels 

of large conductance, I: a continuum mechanics-based hierarchical 

framework, Biophys. J, 95, 563-580 (2008). 

Yuye Tang, Jejoong Yoo, Arun Yethiraj, Qiang Cui and Xi 

Chen, Gating mechanisms of mechanosensitive channels of 

EDIGER, MARK D. (b.1957) Professor. B.A, 1979, 

Bethel College (KS); Ph.D, 1984, Stanford University. 

Physical Chemistry; Polymer Science. Molecular-level 

description of dynamics in materials and the influence of 

dynamics on material properties; polymer blends; polymer 

nanostructures; the glass transition; low molecular 

weight glass formers; ultrastable glasses; translational 

and rotational diffusion; diffusion in thin films and near 

Joshua Teal Schmidt, Stephen Lee, Daniel C. Fredrickson, 

Matthias Conrad, Junliang Sun and Bernd Harbrecht, 

Pd21.3Cd78.7 and Pd23.5Cd76.5 Structures: Their long c axis and 

compositive crystals, chemical twinning and atomic site pref- 

erences, Chem. Eur. J, 13, 1394-1410 (2007). 

Michael Feuerbacher, Carsten Thomas, Julien P. A. Ma- 

kongo, Stefan Hoffmann, Wilder Carrillo-Cabrera, Raul Car- 

doso, Yuri Grin, Guido Kreiner, Jean-Marc Joubert, Thomas 

Schenk, Joseph Gastaldi, Henri Nguyen-Thi, Nathalie Man-


gelinck-Noel, Bernard Billia, Patricia Donnadieu, Aleksandra H. Gellman, Origins of the high 14-helix propensity of cyclo- chains from a readily available precursor, Org. Lett, 10, 

Czyrska-Filemonowicz, Anna Zielinska-Lipiec, Beata Du- hexyl-rigidified residues in beta-peptides, Org. Lett, 9, 1801- 5317-5319 (2008). 

biel, Thomas Weber, Philippe Schaub, Guenter Krauss, 1804 (2007). Erik B. Hadley, Oliver D. Testa, Derek N. Woolfson and 

Volker Gramlich, Jeppe Christensen, Sven Lidin, Daniel Fre- Gabriel Cornilescu, Erik B. Hadley, Matthew G. Woll, Samuel H. Gellman, Preferred side-chain constellations at 

drickson, Marek Mihalkovic, Wieslawa Sikora, Janusz Mali- John L. Markley, Samuel H. Gellman and Claudia C. Corni- antiparallel coiled-coil interfaces, Proc. Natl. Acad. Sci. U. S. 

nowski, Stefan Bruehne, Thomas Proffen, Wolf Assmus, lescu, Solution structure of a small protein containing a fluo- A, 105, 530-535 (2008). 

Marc de Boissieu, Francoise Bley, Jean-Louis Chemin, Juer- rinated side chain in the core, Protein Sci, 16, 14-19 (2007). W. Seth Horne, Joshua L. Price and Samuel H. Gellman, 

gen Schreuer and Walter Steurer, The Samson phase, �- W. Seth Horne and Samuel H. Gellman, Foldamers with Interplay among side chain sequence, backbone composition, 

Mg2Al3, revisited, Z. Kristallogr, 222, 259-288 (2007). heterogeneous backbones, Acc. Chem. Res, 41, 1399-1408 and residue rigidification in polypeptide folding and assem- 

Daniel C. Fredrickson, Sven Lidin, Gerard Venturini, Ber- (2008). bly, Proc. Natl. Acad. Sci. U. S. A, 105, 9151-9156 (2008). 

nard Malaman and Jeppe Christensen, Origins of superstruc- Kimberly J. Peterson, Jack D. Sadowsky, Elizabeth A. Melissa D. Boersma, Jack D. Sadowsky, York A. Tomita 

ture ordering and incommensurability in stuffed CoSn-type Scheef, Soumen Pal, Katerina D. Kourentzi, Richard C. Will- and Samuel H. Gellman, Hydrophile scanning as a complephases, 

J. Amer. Chem. Soc, 130, 8195-8214 (2008). son, Emery H. Bresnick, Nader Sheibani and Samuel H. ment to alanine scanning for exploring and manipulating pro- 

Daniel C. Fredrickson, The nowotny chimney ladder 

phases: the role of electron counts and interfaces in the stability 

of intermetallic compounds. (D) 

Gellman, A fluorescence polarization assay for identifying ligands 

that bind to vascular endothelial growth factor, Anal. 

Biochem, 378, 8-14 (2008). 

William C. Pomerantz, Virany M. Yuwono, Claire L. Piztein-protein 

recognition: Application to the Bim BH3 domain, 

Protein Sci, 17, 1232-1240 (2008). 

E. B. Hadley, The study of protein and peptide folding via 

zey, Jeffery D. Hartgerink, Nicholas L. Abbott and Samuel backbone thioester exchange. (D) 

GELLMAN, SAMUEL H. (b.1959) Professor. A.B, H. Gellman, Nanofibers and lyotropic liquid crystals from a E. P. English, Development of foldamer-based inhibitors 

1981, Harvard University; Ph.D, 1986, Columbia University. 

NIH Fellowship, 1986-1987, California Institute 

of Technology. Chemical Biology; Organic Chemistry. 

Organic chemistry and chemical biology, including the 

design and synthesis of new oligomers with well-defined 

folding properties (“foldamers”), biomedical applications 

class of self-assembling beta-peptides, Angewandte Chemie- 

International Edition, 47, 1241-1244 (2008). 

W. Seth Horne, Melissa D. Boersma, Matthew A. Windsor 

and Samuel H. Gellman, Sequence-based design of alpha/ 

beta-peptide foldamers that mimic BH3 domains, Angewandte 

Chemie-International Edition, 47, 2853-2856 (2008). 

Radeekorn Akkarawongsa, Terra B. Potocky, Emily P. Enof 

viral fusion. (D) 

J. Price, Development of alpha/beta-peptide tertiary and 

quaternary structure. (D) 

M. D. Boersma, Engineering the affinity and selectivity of 

peptide-based inhibitors of protein-protein interactions 

through side chain and backbone modification. (D) 

S. H. Choi, Crystallographic characterization of secondary 

of foldamers, including inhibition of protein-protein in- 

glish, Samuel H. Gellman and Curtis R. Brandt, Inhibition of structures in unnatural peptides. (D) 

teractions; protein design; new polymers for antimicrobial 

and other biomedical applications. TEL: (608) 262- 

3303 FAX: (608) 265-4534 

Web: www.chem.wisc.edu/~gellman 

Email: gellman@chem.wisc.edu 

herpes simplex virus type 1 infection by cationic beta-peptides, 

Antimicrob. Agents Chemother, 52, 2120-2129 (2008). 

Clark A. Miller, Samuel H. Gellman, Nicholas L. Abbott 

and Juan J. de Pablo, Mechanical stability of helical betapeptides 

and a comparison of explicit and implicit solvent 

W. Pomerantz, I. association behavior of ACHC-rich beta- 

peptide foldamers. II. 19f NMR methods for monitoring alpha-peptide 

folding. (D) 

Y. Chi, The development and application of asymmetric 

organocatalytic michael reactions and mannich reactions. (D) 

Liangjie Tang, Erin D. Hopper, Yan Tong, Jack D. Sadow- models, Biophys. J, 95, 3123-3136 (2008). 

sky, Kimberly J. Peterson, Samuel H. Gellman and Michael 

C. Fitzgerald, H/D exchange- and mass spectrometry-based 

strategy for the thermodynamic analysis of protein-ligand 

binding, Anal. Chem, 79, 5869-5877 (2007). 

Christen M. Bell, Denis A. Kissounko, Samuel H. Gellman 

and Shannon S. Stahl, Catalytic metathesis of simple secondary 

amides, Angewandte Chemie-International Edition, 46, 

761-763 (2007). 

Justin K. Murray and Samuel H. Gellman, Targeting protein-protein 

interactions: Lessons from p53/MDM2, Biopoly- 

Pil S. Chae, Marc J. Wander, Aaron P. Bowling, Philip D. 

Laible and Samuel H. Gellman, Glycotripod amphiphiles for 

solubilization and stabilization of a membrane-protein superassembly: 

Importance of branching in the hydrophilic por- 

tion, Chembiochem, 9, 1706-1709 (2008). 

Esther Vaz, William C. Pomerantz, Matthias Geyer, Samu- 

el H. Gellman and Luc Brunsveld, Comparison of design 

strategies for promotion of beta-peptide 14-helix stability in 

water, Chembiochem, 9, 2254-2259 (2008). 

Esteban E. Baquero, William H. James III, Soo Hyuk 

HAMERS, ROBERT J. (b.1958) Professor. B.S, 

1980, University of Wisconsin-Madison; M.S, 1982, 

Cornell University; Ph.D, 1986, Cornell University. Vi- 

siting Scientist, 1985-1986, IBM, Research Division, 

Thomas J. Watson Research Center; Research Staff 

Member, 1986-1990, IBM, Research Division, Thomas 

J. Watson Research Center; Guggenheim Fellowship, 

2000-2001, Univ. of Oxford; Visiting Scholar, 2001, 

University of Oxford. Materials Chemistry; Nanochemis- 

mers, 88, 657-686 (2007). Choi, Samuel H. Gellman and Timothy S. Zwier, Single-con- 

try. Surface and interface chemistry for renewable ener- 

William C. Pomerantz, Katie D. Cadwell, Yung-Jung Hsu, formation ultraviolet and infrared spectroscopy of model syn- gy and biointerface chemistry. Nanotechnology and na- 

Samuel H. Gellman and Nicholas L. Abbott, Sequence dependent 

behavior of amphiphilic beta-peptides on gold surfaces, 

Chem. Mater, 19, 4436-4441 (2007). 

Jack D. Sadowsky, Justin K. Murray, York Tomita and 

Samuel H. Gellman, Exploration of backbone space in foldamers 

containing alpha- and beta-amino acid residues: Developing 

protease-resistant oligomers that bind tightly to the 

BH3-recognition cleft of Bcl-x(L), Chembiochem, 8, 903-916 

(2007). 

Terra B. Potocky, John Silvius, Anant K. Menon and Samuel 

H. Gellman, HeLa cell entry by guanidinium-rich betathetic 

foldamers: Beta-peptides Ac-beta(3)-hPhe-NHMe and 

Ac-beta(3)-hTyr-NHMe, J. Am. Chem. Soc, 130, 4784-4794 

(2008). 

Esteban E. Baquero, William H. James III, Soo Hyuk 

Choi, Samuel H. Gellman and Timothy S. Zwier, Single-conformation 

ultraviolet and infrared spectroscopy of model syn- 

thetic foldamers: Beta-peptides Ac-beta(3)-hPhe-beta(3)- 

hAla-NHMe and Ac-beta(3)-hAla-beta(3)-hPhe-NHMe, J. 

Am. Chem. Soc, 130, 4795-4807 (2008). 

Yonggui Chi, Li Guo, Nathan A. Kopf and Samuel H. 

Gellman, Enantioselective organocatalytic Michael addition 

noscale science. Electronic properties of materials and 

interfaces. Electrocatalysis, photocatalysis, and solar en- 

ergy conversion. Biological interactions with bulk and 

nanoscale materials. Environmental and health impacts 

of nanoscale materials. Computational studies of surface 

adducts. Surface and interface characterization using infrared 

optical, x-ray, and electron-beam methods. TEL: 

(608) 262-6371 FAX: (608) 262-0453 

Web: www.chem.wisc.edu/users/hamers 

Email: rjhamers@wisc.edu 

peptides: Importance of specific cation-cell surface interac- of aldehydes to nitroethylene: Efficient access to gamma(2)- Byoungnam Park, Peerasak Paoprasert, Insik In, Jodi 

tions, Chembiochem, 8, 917-926 (2007). amino acids, J. Am. Chem. Soc, 130, 5608 (2008). Zwickey, Paida E. Colavita, Robert J. Hamers, Padma Gopa- 

Soo Hyuk Choi, Ilia A. Guzei and Samuel H. Gellman, Justin M. Hoerter, Karin M. Otte, Samuel H. Gellman, lan and Paid G. Evans, Functional self-assembled monolay- 

Crystallographic characterization of the alpha/beta-Peptide Qiang Cui and Shannon S. Stahl, Discovery and mechanistic ers for optimized photoinduced charge transfer in organic 

14/15-Helix, J. Am. Chem. Soc, 129, 13780 (2007). study of Al-III-catalyzed transamidation of tertiary amides, J. field effect transistors, Adv. Mater, 19, 4353 (2007). 

Jack D. Sadowsky, W. Douglas Fairlie, Erik B. Hadley, Am. Chem. Soc, 130, 647-654 (2008). Wensha Yang, James E. Butler, John N. Russell Jr. and 

Hee-Seung Lee, Naoki Umezawa, Zaneta Nikolovska-Coles- Soo Hyuk Choi, Ilia A. Guzei, Lara C. Spencer and Samu- Robert J. Hamers, Direct electrical detection of antigen-antika, 

Shaomeng Wang, David C. S. Huang, York Tomita and el H. Gellman, Crystallographic characterization of helical body binding on diamond and silicon substrates using electri- 

Samuel H. Gellman, (alpha/beta+alpha)-Peptide antagonists secondary structures in alpha/beta-peptides with 1:1 residue cal impedance spectroscopy, Analyst, 132, 296-306 (2007). 

of BH3 Domain/Bcl-x(L) recognition: Toward general strate- alternation, J. Am. Chem. Soc, 130, 6544-6550 (2008). Weina Peng , Michelle M. Roberts, Eric P. Nordberg, 

gies for foldamer-based inhibition of protein-protein interac- Felix Freire, John D. Fisk, Aaron J. Peoples, Monika Ivan- Frank S. Flack, Paula E. Colavita, Robert J. Hamers, Donald 

tions, J. Am. Chem. Soc, 129, 139-154 (2007). cic, Ilia A. Guzei and Samuel H. Gellman, Diacid linkers that E. Savage, Max G. Lagally and Mark A. Eriksson, Single- 

Brendan P. Mowery, Sarah E. Lee, Denis A. Kissounko, promote parallel beta-sheet secondary structure in water, J. Crystal/Amorphous-Multilayer Heterostructures based on 

Raquel F. Epand, Richard M. Epand, Bernard Weisblum, Am. Chem. Soc, 130, 7839 (2008). membrane transfer, Applied Physics Letters, 90, 183107 

Shannon S. Stahl and Samuel H. Gellman, Mimicry of anti- Claire L. Pizzey, William C. Pomerantz, Bong-June Sung, (2007). 

microbial host-defense peptides by random copolymers, J. Virany M. Yuwono, Samuel H. Gellman, Jeffery D. Hartger- Kiu-Yuen Tse, Lingzhi Zhang, Sarah E. Baker, Beth M. 

Am. Chem. Soc, 129, 15474 (2007). ink, Arun Yethiraj and Nicholas L. Abbott, Characterization Nichols Robert West and Robert J. Hamers, Vertically 

Denis A. Kissounko, Justin M. Hoerter, Ilia A. Guzei, of nanofibers formed by self-assembly of beta-peptide oli- aligned carbon nanofibers coupled with organosilicon elec- 

Qiang Cui, Samuel H. Gellman and Shannon S. Stahl, Ti-IV- gomers using small angle x-ray scattering, J. Chem. Phys, trolytes: Electrical properties of a high-stability nanostrucmediated 

reactions between primary amines and secondary 129 (2008). tured electrochemical interface, Chemistry of Materials, 19, 

carboxamides: Amidine formation versus transamidation, J. Clark A. Miller, Juan P. Hernandez-Ortiz, Nicholas L. Ab- 5734-5741 (2007). 

Am. Chem. Soc, 129, 1776-1783 (2007). bott, Samuel H. Gellman and Juan J. de Pablo, Dipole-in- Bin Sun, Sarah E. Baker, James E. Butler, Heesuk Kim, 

Margaret A. Schmitt, Bernard Weisblum and Samuel H. duced self-assembly of helical beta-peptides, J. Chem. Phys, John N. Russell Jr., Lu Shang, Kiu-Yuen Tse, Wensha Yang 

Gellman, Interplay among folding, sequence, and lipophilici- 129 (2008). and Robert J. Hamers, Covalent molecular functionalization 

ty in the antibacterial and hemolytic activities of alpha/beta- Justin K. Murray, Jack D. Sadowsky, Mark Scalf, Lloyd of diamond thin-film transistors, Diamond Relat. Mater, 16, 

peptides, J. Am. Chem. Soc, 129, 417-428 (2007). M. Smith, York Tomita and Samuel H. Gellman, Exploration 1608-1615 (2007). 

W. Seth Horne, Joshua L. Price, James L. Keck and Samu- of structure: Activity relationships among foldamer ligands Weina Peng, Michelle Roberts, Eric Nordberg, Frank 

el H. Gellman, Helix bundle quaternary structure from alpha/ for a specific protein binding site via parallel and split-and- Flack, Paula Colavita, Robert Hamers, Donald Savage, Max 

beta-peptide foldamers, J. Am. Chem. Soc, 129, 4178 (2007). mix library synthesis, J. Comb. Chem, 10, 204-215 (2008). Lagally and Mark Eriksson, A novel method to fabricate 

Yonggui Chi, Emily P. English, William C. Pomerantz, W. Raquel F. Epand, Brendan P. Mowery, Sarah E. Lee, Shan- multiple-layer SOI: Single-Cystal Si nanomembrane transfer 

Seth Horne, Leo A. Joyce, Lane R. Alexander, William S. non S. Stahl, Robert I. Lehrer, Samuel H. Gellman and Rich- and stacking, Electrochemical Society Transactions, 6, 333 

Fleming, Elizabeth A. Hopkins and Samuel H. Gellman, ard M. Epand, Dual mechanism of bacterial lethality for a (2007). 

Practical synthesis of enantiomerically pure beta(2)-amino cationic sequence-random copolymer that mimics host-de- Paula E. Colavita, Bin Sun, Kiu-Yuen Tse and Robert J. 

acids via proline-catalyzed diastereoselective aminomethyl- fense antimicrobial peptides, J. Mol. Biol, 379, 38-50 (2008). Hamers, Photochemical grafting of n-alkenes onto carbon 

ation of aldehydes, J. Am. Chem. Soc, 129, 6050-6055 Xiao Zhu, Peter Koenig, Samuel H. Gellman, Arun Yethi- surfaces: the role of photoelectron ejection, J. Am. Chem. 

(2007). raj and Qiang Cui, Establishing effective simulation proto- Soc, 129, 13554-13565 (2007). 

Joshua L. Price, W. Seth Horne and Samuel H. Gellman, cols for beta- and alpha/beta-peptides. II. molecular mechani- Fairland F. Amos, Stephen A. Morin, Jeremy A. Streifer, 

Discrete heterogeneous quaternary structure formed by al- cal (MM) model for a cyclic beta-residue, J. Phys. Chem. B, Robert J. Hamers and Song Jin, Photodetector arrays directly 

pha/beta-peptide foldamers and alpha-peptides, J. Am. Chem. 112, 5439-5448 (2008). assembled onto polymer substrates from aqueous solution, J. 

Soc, 129, 6376 (2007). William C. Pomerantz, Tami L. R. Grygiel, Jonathan R. Am. Chem. Soc, 129, 14296-14302 (2007). 

Justin K. Murray and Samuel H. Gellman, Parallel synthe- Lai and Samuel H. Gellman, Distinctive circular dichroism Kevin P. Weidkamp, Rudolf M. Tromp and Robert J. 

sis of peptide libraries using microwave irradiation, Nature signature for 14-helix-bundle formation by beta-peptides, Hamers, Epitaxial growth of large pentacene crystals on Si 

Protocols, 2, 624-631 (2007). Org. Lett, 10, 1799-1802 (2008). (001) surfaces functionalized with molecular monolayers, 

Myung-ryul Lee, Tami L. Raguse, Marina Schinnerl, Wil- Myung-ryul Lee, Shannon S. Stahl and Samuel H. Gell- Journal of Physical Chemistry C, 111, 16489-16497 (2007). 

liam C. Pomerantz, Xiaodong Wang, Peter Wipf and Samuel man, Synthesis of beta-lactams bearing functionalized side Kevin M. Metz, Divya Goel and Robert J. Hamers, Molec-


ular monolayers enhance the formation of electrocatalytic Lu Shang, Assembly of nanowires into novel biosensor nowire Growth and Eshelby Twist, Science (Washington, 

platinum nanoparticles on vertically aligned carbon nanofiber configurations using dielectrophoresis. (D) 

DC, U. S.), 320, 1060-1063 (2008). 

scaffolds, Journal of Physical Chemistry C, 111, 7260-7265 

(2007). 

K. O. Stuen, I. In, E. Han, J. A. Streifer, R. J. Hamers, P. F. 

Nealey and P. Gopalan, Imaging layers for the directed assembly 

of block copolymer films: Dependence of the physical 

and chemical properties of patterned polymer brushes on 

brush molecular weight, Journal of Vacuum Science and 

Technology B, 25, 1958-1962 (2007). 

Xiaoyu Wang, Paula E. Colavita, Kevin M. Metz, James E. 

Butler and Robert J. Hamers, Direct photopatterning and 

SEM Imaging of molecular monolayers on diamond surfaces: 

Mechanistic insights into UV-Initiated molecular grafting, 

Langmuir, 23, 11623-11630 (2007). 

Matthew S. Marcus, Lu Shang, Bo Li, Jeremy A. Streifer, 

Joseph D. Beck, Edward Perkins, Mark A. Eriksson and Robert 

J. Hamers, Dielectrophoretic manipulation and real-time 

electrical detection of single-nanowire bridges in aqueous saline 

solutions, Small, 3, 1610-1617 (2007). 

Michael P. Schwartz and Robert J. Hamers, Reaction of 

acetonitrile with the silicon(001) surface: A combined XPS 

and FTIR study, Surf. Sci, 601, 945-953 (2007). 

Peerasak Paoprasert, Byoungnam Park, Heesuk Kim, Paula 

Colavita, Robert J. Hamers, Paul G. Evans and Padma Gopa- 

lan, Dipolar chromophore functional layers in organic field 

effect transistors, Adv. Mater, 20, 4180 (2008). 

Joseph D. Beck, Lu Shang, Bo Li, Matthew S. Marcus and 

Robert J. Hamers, Discrimination between Bacillus species 

by impedance analysis of individual dielectrophoretically positioned 

spores, Anal. Chem, 80, 3757-3761 (2008). 

Robert J. Hamers, Formation and characterization of organic 

monolayers on semiconductor surfaces, Annual Review 

of Analytical Chemistry, 1, 707-736 (2008). 

S. Seo, L. C. Grabow, M. Mavrikakis, R. J. Hamers, N. J. 

Thompson and P. G. Evans, Molecular-scale structural distortion 

near vacancies in pentacene, Appl. Phys. Lett, 92 

(2008). 

Soon Seo, Lars Grabow, Manos Mavrikakis, Robert J. 

Hamers, N. J. Thompson and Paul G. Evans, Molecular-scale 

structural distortion near vacancies in pentacene, Applied 

Physics Letters, 92, 153314 (2008). 

Matthew R. Lockett, Stephen C. Weibel, Margaret F. Phillips, 

Michael R. Shortreed, Bin Sun, Robert M. Corn, Robert 

J. Hamers, Franco Cerrina and Lloyd M. Smith, Carbon-onmetal 

films for surface plasmon resonance detection of DNA 

arrays, J. Am. Chem. Soc, 130, 8611 (2008). 

Paula E. Colavita, Bin Sun, Xiaoyu Wang and Robert J. 

Hamers, Influence of surface termination and electronic 

structure on the photochemical grafting of alkenes to carbon 

surfaces, J. Phys. Chem. C, 113, 1526-1535 (2008). 

Paula E. Colavita, Bin Sun, Kiu-Yuen Tse and Robert J. 

Hamers, Photo-induced surface functionalization of carbon 

surfaces: The role of photoelectron ejection, J. Vac. Sci. 

Tech. A, 26, 925-931 (2008). 

Elizabeth C. Landis and Robert J. Hamers, Covalent grafting 

of ferrocene to vertically aligned carbon nanofibers: 

Electron-transfer processes at nanostructured electrodes, 

Journal of Physical Chemistry C, 112, 16910-16918 (2008). 

Paula E. Colavita, Jeremy A. Streifer, Bin Sun, Xiaoyu 

Wang, Patrick Warf and Robert J. Hamers, Enhancement of 

photochemical grafting of terminal alkenes at surfaces via 

molecular mediators: The role of surface-bound electron acceptors, 

Journal of Physical Chemistry C, 112, 5102-5112 

(2008). 

Robert J. Hamers, Diamonds are for tethers, Nature, 454, 

708-709 (2008). 

Huiman Kang, Francois A. Detcheverry, Andrew N. 

Mangham, Mark P. Stoykovich, Kostas Ch Daoulas, Robert 

J. Hamers, Marcus Mueller, Juan J. de Pablo and Paul F. 

Nealey, Hierarchical assembly of nanoparticle superstructures 

from block copolymer-nanoparticle composites, Phys. 

Rev. Lett, 100 (2008). 

Bo Li, Lu Shang, Matthew S. Marcus, Tarni Lasseter 

Clare, Edward Perkins and Robert J. Hamers, Chemoselective 

nanowire fuses: Chemically induced cleavage and electrical, 

detection of carbon nanofiber bridges, Small, 4, 795- 

801 (2008). 

Heesuk Kim, Paula E. Colavita, Peerasak Paoprasert, Padma 

Gopalan, T. F. Kuech and Robert J. Hamers, Grafting of 

molecular layers to oxidized gallium nitride surfaces via 

phosphonic acid linkages, Surf. Sci, 602, 2382-2388 (2008). 

Heesuk Kim, Paula E. Colavita, Peerasak Paoprasert, Padma 

Gopalan, T. F. Kuech and Robert J. Hamers, Grafting of 

molecular layers to oxidized gallium nitride surfaces via 

phosphonic acid linkages, Surface Science, 602, 2382-2388 

(2008). 

HARRIMAN, JOHN E. (b.1936) Professor Emeritus. 

B.S, 1959, University of Wisconsin; Ph.D, 1963, Harvard. 

NSF Postdoctoral Fellow, 1962-1963, Uppsala 

University, Sweden. Theoretical Chemistry. Reduced 

density matrices, electronic structure, magnetic reso- 

nance. TEL: (608) 262-0264 FAX: (608) 262-9918 

Web: www.chem.wisc.edu/users/harriman 

Email: harriman@chem.wisc.edu 

John E. Harriman, Reduced-density-matrix cumulants and 

correlation, Phys. Rev. A: At., Mol., Opt. Phys, 75, 032513/1- 

032513/7 (2007). 

John E. Harriman, Hund’s rule in two-electron atomic systems, 

J. Chem. Educ, 85, 451-452 (2008). 

HSUNG, RICHARD P.—See Medicinal and/or Phar- 

maceutical Chemistry Section, University of Wisconsin- 

Madison, School of Pharmacy. 

JIN, SONG (b.1975) Assistant Professor. B.S, 1997, 

Peking (Beijing) University, Beijing, China; Ph.D, 2002, 

Cornell University, Ithica NY. Postdoctoral Fellow, 

2002-2004, Harvard University, Cambridge MA. Analyt- 

ical Chemistry; Materials Chemistry. Research is centered 

on the chemistry and physics of nanomaterials. We 

develop rational chemical synthesis of nanowire materi- 

als of metal silicides and rare earth chacolgenides and 

elucidate fundamental synthesis-structure-property relationships 

for spintronics and photovoltaic and thermoelectric 

energy conversion. We not only explore chemical 

synthesis and carry out the structural characterization, 

but also investigate their physical properties, especially 

through device fabrication. TEL: (608) 262-1562 FAX: 

(608) 262-0453 

Web: www.chem.wisc.edu/users/jin 

Email: jin@chem.wisc.edu 

Matthew J. Bierman, Katherine M. Van Heuvelen, Dieter 

Schmeisser, Thomas C. Brunold and Song Jin, Ferromagnetic 

semiconducting EuO nanorods, Adv. Mater. (Weinheim, 

Ger.), 19, 2677-2681 (2007). 

Yipu Song and Song Jin, Synthesis and properties of sin- 

gle-crystal �3-Ni3Si nanowires, Appl. Phys. Lett, 90, 173122/ 

1-173122/3 (2007). 

Andrew L. Schmitt and Song Jin, Selective patterned 

growth of silicide nanowires without the use of metal cata- 

lysts, Chem. Mater, 19, 126-128 (2007). 

Jeannine R. Szczech, Andrew L. Schmitt, Matthew J. Bierman 

and Song Jin, single-crystal semiconducting chromium 

disilicide nanowires synthesized via chemical vapor trans- 

port, Chem. Mater, 19, 3238-3243 (2007). 

Stephen A. Morin, Fairland F. Amos and Song Jin, Biomimetic 

Assembly of Zinc Oxide Nanorods onto Flexible Poly- 

mers, J. Am. Chem. Soc, 129, 13776-13777 (2007). 

Fairland F. Amos, Stephen A. Morin, Jeremy A. Streifer, 

Robert J. Hamers and Song Jin, Photodetector Arrays Directly 

Assembled onto Polymer Substrates from Aqueous Solution, 

J. Am. Chem. Soc, 129, 14296-14302 (2007). 

Feng Zhou, Jeannine Szczech, Michael T. Pettes, Arden L. 

Moore, Song Jin and Li Shi, Determination of transport properties 

in chromium disilicide nanowires via combined thermoelectric 

and structural characterizations, Nano Lett, 7, 

1649-1654 (2007). 

Matthew J. Bierman, Y. K. Albert Lau and Song Jin, Hyperbranched 

PbS and PbSe Nanowires and the Effect of Hydrogen 

Gas on Their Synthesis, Nano Lett, 7, 2907-2912 

(2007). 

Yipu Song, Andrew L. Schmitt and Song Jin, Ultralong 

single-crystal metallic Ni2Si nanowires with low resistivity, 

Nano Lett, 7, 965-969 (2007). 

Fairland F. Amos, Stephen A. Morin and Song Jin, Directed 

nucleation and growth of cadmium-sulfide on photo-oxi- 

dized poly(ethylene terephthalate) and their device applica- 

tions, PMSE Prepr, 96, 176-177 (2007). 

Stephen A. Morin, Fairland F. Amos and Song Jin, Biomimetic 

assembly of zinc oxide microarrays on flexible polycarbonate 

film, PMSE Prepr, 96, 227-228 (2007). 

J. M. Higgins, A. L. Schmitt, I. A. Guzei and S. Jin, Higher 

manganese silicide nanowires of nowotny chimney ladder 

phase, J. Am. Chem. Soc, 130, 16086-16094 (2008). 

Daniel Gottlieb, Stephen A. Morin, Song Jin and Ronald T. 

Raines, Self-assembled collagen-like peptide fibers as templates 

for metallic nanowires, J. Mater. Chem, 18, 3865-3870 

(2008). 

KEUTSCH, FRANK N. Assistant Professor. Ph.D, 

2001, UC Berkeley. Research Associate, 2001-2005, 

Harvard University. Atmospheric Chemistry; Physical 

Chemistry. Environmental, analytical and physical chemistry: 

Field and laboratory investigations of tropospheric 

chemistry of volatile organic compounds and secondary 

organic aerosol formation. Real-time measurement of 

small oxidized organic compounds in the atmosphere 

with laser spectroscopic techniques. Instrument Development. 

TEL: (608) 262-7904 FAX: (608) 262-0453 

Web: www.chem.wisc.edu/users/keutsch 

Email: keutsch@chem.wisc.edu 

keutsch@wisc.edu 

Thomas F. Hanisco, E. J. Moyer, E. M. Weinstock, J. M. 

St. Clair, D. S. Sayres, J. B. Smith, R. Lockwood, J. G. Anderson, 

A. E. Dessler, F. N. Keutsch, J. R. Spackman, W. G. 

Read and T. P. Bui, Observations of deep convective influence 

on stratospheric water vapor and its isotopic composi- 

tion, Geophysical Research Letters, 34 (2007). 

H. A. Harker, F. N. Keutsch, C. Leforestier, Y. Scribano, J. 

X. Han and R. J. Saykally, Toward a precise determination of 

the acceptor switching splitting in the water dimer, Mol. 

Phys, 105, 497-512 (2007). 

H. A. Harker, F. N. Keutsch, C. Leforestier, Y. Scribano, J. 

X. Han and R. J. Saykally, Refinements in the description of 

excited VRT states of the water dimer, Mol. Phys, 105, 513- 

527 (2007). 

Andrew J. Huisman, John R. Hottle, Katherine L. Coens, 

Joshua P. DiGangi, Melissa M. Galloway, Aster Kammrath 

and Frank N. Keutsch, Laser-induced phosphorescence for 

the in situ detection of glyoxal at part per trillion mixing ratios, 

Anal. Chem, 80, 5884-5891 (2008). 

E. J. Moyer, D. S. Sayres, G. S. Engel, J. M. St Clair, F. N. 

Keutsch, N. T. Allen, J. H. Kroll and J. G. Anderson, Design 

considerations in high-sensitivity off-axis integrated cavity 

output spectroscopy, Applied Physics B-Lasers and Optics, 

92, 467-474 (2008). 

M. M. Galloway, P. S. Chhabra, A. W. H. Chan, J. D. Surratt, 

R. C. Flagan, J. H. Seinfeld and F. N. Keutsch, Glyoxal 

uptake on ammonium sulphate seed aerosol: Reaction prod- 

ucts and reversibility of uptake under dark and irradiated 

conditions, Atmos. Chem. Phys. Disc, 8, 20799-20838 

(2008). 

Wei Lin, Jia-Xiang Han, Lynelle K. Takahashi, Heather A. 

Harker, Frank N. Keutsch and Richard J. Saykally, Terahertz 

vibration-rotation-tunneling spectroscopy of the water tetra- 

mer-d8: Combined analysis of vibrational bands at 4.1 and 

2.0 THz, J. Chem. Phys, 128 (2008). 

J. M. St Clair, T. F. Hanisco, E. M. Weinstock, E. J. Moy- 

er, D. S. Sayres, F. N. Keutsch, J. H. Kroll, J. N. Demusz, N. 

T. Allen, J. B. Smith, J. R. Spackman and J. G. Anderson, A 

new photolysis laser-induced fluorescence instrument for the 

detection of H2O and HDO in the lower stratosphere, Rev. 

Sci. Instrum, 79 (2008). 

KIESSLING, LAURA L. Hilldale Professor. B.S, 

1983, Massachusetts Institute of Technology; Ph.D, 

1989, Yale University. American Chemical Society Post- 

doctoral Fellow, 1989-1991, California Institute of Technology. 

Chemical Biology; Organic Chemistry. The 

Kiessling Group uses chemical synthesis to access bioactive 

probes, including polymers and small molecules. 

They have generated compounds that can block protein–carbohydrate 

interactions or carbohydrate biosynthetic 

pathways to elucidate the biological roles of carbohydrates. 

They also have exploited the properties of protein–carbohydrate 

interactions, especially multivalent 

binding, to target tumors. Lastly, they are examining 

how cells detect and respond to stimuli in their environment. 

TEL: (608) 262-0541 FAX: (608) 265-0764 

Web: www.biochem.wisc.edu/faculty/kiessling/lab/ 

Email: Kiessling@chem.wisc.edu 

Coby B. Carlson, Patricia Mowery, Robert M. Owen, Emily 

C. Dykhuizen and Laura L. Kiessling, Selective Tumor 

Cell Targeting Using Low-Affinity, Multivalent Interactions, 

ACS Chem. Biol, 2, 119-127 (2007). 

Erik B. Puffer, Jason K. Pontrello, Jessica J. Hollenbeck, 

John A. Kink and Laura L. Kiessling, Activating B cell signaling 

with defined multivalent ligands, ACS Chem. Biol, 2, 

252-262 (2007). 

Ratmir Derda, Lingyin Li, Brendan P. Orner, Rachel L. 

Lewis, James A. Thomson and Laura L. Kiessling, Defined 

Substrates for Human Embryonic Stem Cell Growth Identi- 

Bin Sun, Integration of carbon based materials with microelectronic 

and electromechanical devices for biosensing 

applications. (D) 

Heesuk Kim, Chemical grafting of molecular and biomolecular 

layers to compound semiconductor surfaces. (D) 

Jeremy A. Streifer, Photochemical functionalization of hydrogen 

terminated silicon surfaces with functional organic alkenes. 

(D) 

Kevin M. Metz, Synthesis and applications of hybrid nanowires. 

(D) 

Kiu-Yuen Tse, Electrical properties of nanostructured car- 

Jeannine R. Szczech and Song Jin, Mg2Si nanocomposite 

converted from diatomaceous earth as a potential thermoelectric 

nanomaterial, J. Solid State Chem, 181, 1565-1570 

(2008). 

Yipu Song, Andrew L. Schmitt and Song Jin, Spin-Dependent 

Tunneling Transport into CrO2 Nanorod Devices with 

Nonmagnetic Contacts, Nano Lett, 8, 2356-2361 (2008). 

Andrew L. Schmitt, Jeremy M. Higgins and Song Jin, 

Chemical Synthesis and Magnetotransport of Magnetic Semiconducting 

Fe1-xCoxSi Alloy Nanowires, Nano Lett, 8, 810- 

815 (2008). 

Matthew J. Bierman, Y. K. Albert Lau, Alexander V. Kvit, 

fied from Surface Arrays, ACS Chem. Biol, 2, 347-355 

(2007). 

Jennifer M. Chad, Karunan Partha Sarathy, Todd D. Gru- 

ber, Eshwari Addala, Laura L. Kiessling and David A. R. 

Sanders, Site-Directed Mutagenesis of UDP-Galactopyranose 

Mutase Reveals a Critical Role for the Active-Site, Conserved 

Arginine Residues, Biochemistry, 46, 6723-6732 

(2007). 

Robert M. Owen, Coby B. Carlson, Jinwang Xu, Patricia 

Mowery, Elisabetta Fasella and Laura L. Kiessling, Bifunc- 

tional ligands that target cells displaying the �v�3 integrin, 

ChemBioChem, 8, 68-82 (2007). 

bons in aqueous and non-aqueous electrolytes. (D) Andrew L. Schmitt and Song Jin, Dislocation-Driven Na- Laura L. Kiessling and Erin E. Carlson, The search for


chemical probes to illuminate carbohydrate function, Chemical 

Biology, 2, 635-667 (2007). 

M. Jack Borrok and Laura L. Kiessling, Non-carbohydrate 

Inhibitors of the Lectin DC-SIGN, J. Am. Chem. Soc, 129, 

12780-12785 (2007). 

Ratmir Derda, Daniel J. Wherritt and Laura L. Kiessling, 

Solid-Phase Synthesis of Alkanethiols for the Preparation of 

Self-Assembled Monolayers, Langmuir, 23, 11164-11167 

(2007). 

Erin E. McElroy, Jason K. Pontrello and Laura L. Kiessling, 

General strategy for the synthesis of biologically active 

block copolymers, Polym. Prepr. (Am. Chem. Soc., Div. Po- 

lym. Chem.), 48, 219-220 (2007). 

Kittikhun Wangkanont, Matthew J. Allen and Laura L. 

Kiessling, Graft co-polymers by ring-opening metathesis 

polymerization from a main chain containing latent monomers, 

Polym. Prepr. (Am. Chem. Soc., Div. Polym. Chem.), 

48, 979 (2007). 

M. Jack Borrok, Laura L. Kiessling and Katrina T. Forest, 

Conformational changes of glucose/galactose-binding protein 

illuminated by open, unliganded, and ultra-high-resolution ligand-bound 

structures, Protein Sci, 16, 1032-1041 (2007). 

M. Jack Borrok, Erin M. Kolonko and Laura L. Kiessling, 

Chemical Probes of Bacterial Signal Transduction Reveal 

That Repellents Stabilize and Attractants Destabilize the 

Chemoreceptor Array, ACS Chem. Biol, 3, 101-109 (2008). 

Eric S. Underbakke, Yimin Zhu and Laura L. Kiessling, 

Isotope-coded affinity tags with tunable reactivites for protein 

footprinting, Angewandte Chemie International Edition, 

47, 9677-9680 (2008). 

Laura L. Kiessling, Travis Young, Todd D. Gruber and 

Kathleen H. Mortell, Multivalency in protein–carbohydrate 

recognition, Glycoscience: Chemistry and Chemical Biology, 

2, 1817-1864 (2008). 

Erin M. Kolonko and Laura L. Kiessling, A Polymeric Domain 

That Promotes Cellular Internalization, J. Am. Chem. 

Soc, 130, 5626-5627 (2008). 

Emily C. Dykhuizen, John F. May, Aimon Tongpenyai and 

Laura L. Kiessling, Inhibitors of UDP-galactopyranose mutase 

thwart mycobacterial growth, J. Am. Chem. Soc, 130, 

6706-6707 (2008). 

Shane L. Mangold, Rachael T. Carpenter and Laura L. 

Kiessling, Synthesis of Fluorogenic Polymers for Visualizing 

Cellular Internalization, Org. Lett, 10, 2997-3000 (2008). 

A. M. Weir, A chemical biology approach towards the elucidation 

of human embryonic cell signaling. (M) 

E. B. Puffer, Exploring B cell receptor function using defined 

multivalent ligands. (D) 

E. C. Dykhuizen, Inhibitors for enzymes involved in oligosaccharide 

biosynthesis. (D) 

E. M. Kolonko, The development of bioactive, cell-permeable 

polymers. (D) 

E. S. Underbakke, Illuminating protein–protein interactions 

in the Escherichia coli chemotaxis signaling lattice 

through protein footprinting. (D) 

M. J. Borrok, Ligand recognition and signal transduction in 

bacterial chemotaxis. (D) 

R. Derda, Combinatorial approach to synthetic extracellular 

environments to control the growth of human embryonic 

stem cells. (D) 

third-row transition metal atoms, Journal of Chemical Theory 

and Computation, 4, 908-919 (2008). 

Avery L. Watkins, Brian G. Hashiguchi and Clark R. Landis, 

Highly enantioselective hydroformylation of aryl alkenes 

with diazaphospholane ligands, Org. Lett, 10, 4553-4556 

(2008). 

B. G. Hashiguchi, Synthesis and development of bidentate 

3,4-diazaphospholanes for metal-catalyzed reactions. (D) 

M. D. Christianson, Mechanistic studies of catalytic alkene 

polymerization and the development of stopped-flow kinetics. 

(D) 

LI, LINGJUN—See Medicinal and/or Pharmaceutical 

Chemistry Section, University of Wisconsin-Madison, 

School of Pharmacy. 

MAHANTHAPPA, MAHESH K. (b.1976) Assistant 

Professor. B.A, 1997, University of Colorado-Boulder; 

Ph.D, 2003, Stanford University. Chemical Engineering 

Research Associate, 2003-2006, University of Minnesota-Twin 

Cities. Organometallic Chemistry; Polymer Science. 

To develop and to exploit modern methods in synthetic 

chemistry to gain molecular level understanding 

and control over the properties of new polymeric materi- 

als, with particular emphasis on materials processability. 

TEL: (608) 262-0421 FAX: (608) 262-6143 

Web: www.chem.wisc.edu/users/mahesh 

Email: mahesh@chem.wisc.edu 

Mahesh K. Mahanthappa, Lisa S. Lim, Marc A. Hillmyer 

and Frank S. Bates, Control of Mechanical Behavior in Po- 

lyolefin Composites: Integration of Glassy, Rubbery, and 

Semicrystalline Components, Macromolecules, 40, 1585- 

1593 (2007). 

Adam J. Meuler, Mahesh K. Mahanthappa, Marc A. Hillmyer 

and Frank S. Bates, Synthesis of Monodisperse �- 

Hydroxypoly(styrene) in Hydrocarbon Media Using a Functional 

Organolithium, Macromolecules, 40, 760-762 (2007). 

Mahesh K. Mahanthappa, Marc A. Hillmyer and Frank S. 

Bates, Mechanical Consequences of Molecular Composition 

on Failure in Polyolefin Composites Containing Glassy, 

Elastomeric, and Semicrystalline Components, Macromolecules 

(Washington, DC, U. S.), 41, 1341-1351 (2008). 

M. Brett Runge, Corinne E. Lipscomb, Lindsay R. Ditzler, 

Mahesh K. Mahanthappa, Alexei V. Tivanski and Ned B. 

Bowden, Investigation of the Assembly of Comb Block 

Copolymers in the Solid State, Macromolecules (Washing- 

ton, DC, U. S.), 41, 7687-7694 (2008). 

MCMAHON, ROBERT J. (b.1958) Professor. B.S, 

1980, University of Illinois; Ph.D, 1985, University of 

California, Los Angeles. Research Associate, 1985-1988, 

Massachusetts Institute of Technology (MIT). Organic 

Chemistry. Generation and characterization of reactive 

intermediates; mechanistic organic chemistry of harsh 

environments; astrochemistry; combustion; thermal and 

photochemical rearrangement mechanisms of organic 

and organometallic compounds; organic materials chemistry. 

TEL: (608) 262-0660 FAX: (608) 265-4534 

penhagen. Chemistry Education. Computers and interac- 

tive video in chemical education; web-based chemical 

education; introduction of hands-on experimentation into 

the curriculum at all levels. TEL: (608) 262-5154 FAX: 

(608) 265-8094 

Web: www.chem.wisc.edu/users/jwmoore 

Email: jwmoore@chem.wisc.edu 

J. W. Moore, E. A. Moore, J. L. Holmes, Rachel Bain, Ieva 

Reich, W. F. Coleman, H. J. Reich, Ed Vitz and T. J. Zielinksi, 

The journal of chemical education digital library: Enhanc- 

ing learning with online resources, Chemist’s Guide to Effective 

Teaching, 2, 256-272 (2008). 

Alton J. Banks, Evan M. Davis, Jon L. Holmes, Jerrold J. 

Jacobsen, John C. Kotz, John W. Moore, Paul F. Schatz, William 

R. Robinson, Jaclyn Tweedale and Susan Young, Peri- 

odic table live!, Journal of Chemical Education: Software, 

SE17 (2008). 

Caroline Pharr, Spectroscopic characterization of triplet (2and 

3-thienyl)carbenes and development, implementation, 

and testing of a web-based tool for use in middle and high 

school classrooms. (D) 

Janice Hall Tomasik, I. direct observation of zirconocenecatalyzed 

alkene polymerization via NMR and the role of an 

aluminum alkyl during polymerization II. Design and evaluation 

of an online nanoscience course for teachers. (D) 

NATHANSON, GILBERT M. (b.1957) Professor. 

B.S, 1979, Yale University; Ph.D, 1985, Harvard University. 

Miller and Postdoctoral Fellow, 1985-1988, University 

of California, Berkeley. Physical Chemistry. Mo- 

lecular beam studies of gas-liquid collisions and reactions; 

atmospheric heterogeneous chemistry; structure 

and reactivity of the surfaces of pure liquids, acidic and 

basic solutions, soluble and insoluble monolayers. TEL: 

(608) 262-8098 FAX: (608) 262-9918 

Web: www.chem.wisc.edu/~nathanson/ 

Email: nathanson@chem.wisc.edu 

Seong-Chan Park, Daniel K. Burden and Gilbert M. Nathanson, 

The inhibition of N2O5 hydrolysis in sulfuric acid 

by 1-butanol and 1-hexanol surfactant coatings, J. Phys. 

Chem. A, 111, 2921-2929 (2007). 

Annabel H. Muenter, Jennifer L. DeZwaan and Gilbert M. 

Nathanson, Interfacial interactions of DCl with salty glycerol 

solutions of KI, NaI, LiI and NaBr, J. Phys. Chem. C, 111, 

15043-15052 (2007). 

Jennifer L. DeZwaan, Susan M. Brastad and Gilbert M. 

Nathanson, Evidence for interfacial [FDCl](-) in collisions 

between DCl and F- in KF-glycerol solutions, Journal of 

Physical Chemistry C, 112, 15449-15457 (2008). 

Jennifer L. DeZwaan, Susan M. Brastad and Gilbert M. 

Nathanson, The roles of salt concentration and cation charge 

in collisions of Ar and DCl with salty glycerol solutions of 

NaI and CaI2, Journal of Physical Chemistry C, 112, 3008- 

3017 (2008). 

Jennifer L. DeZwaan, The effects of dissolved ions on 

near-interfacial proton transfer in liquid glycerol. (D) 

LANDIS, CLARK R. (b.1956) Professor. B.S, 1979, 

University of Illinois-Urbana; Ph.D, 1983, University of 

Chicago. Catalysis; Inorganic Chemistry. Homogeneous 

catalysis by transition metals; kinetics and mechanism of 

catalytic reactions; development of new instrumentation 

for kinetics; electronic structure theory; synthesis of chiral 

ligands for enantioselective catalysis; catalytic alkene 

polymerization; catalytic hydroformylation; computer 

modeling of catalytic reaction mechanisms. TEL: (608) 

262-0362 FAX: (608) 262-6143 

Web: www.chem.wisc.edu/people/profiles/Landis.php 

Email: landis@chem.wisc.edu 

Jerzy Klosin and Clark R. Landis, Ligands for practical 

rhodium-catalyzed asymmetric hydroformylation, Acc. 

Chem. Res, 40, 1251-1259 (2007). 

Brian V. Popp, Johanna E. Wendlandt, Clark R. Landis 

and Shannon S. Stahl, Reaction of molecular oxygen with an 

NHC-coordinated Pd-0 complex: Computational insights and 

experimental implications, Angewandte Chemie-International 

Edition, 46, 601-604 (2007). 

Matthew D. Christianson and Clark R. Landis, Generalized 

treatment of NMR spectra for rapid chemical reactions, Concepts 

in Magnetic Resonance Part A, 30A, 165-183 (2007). 

Kevin A. Kreisel, Glenn P. A. Yap, Olga Dmitrenko, Clark 

R. Landis and Klaus H. Theopold, The shortest metal-metal 

bond yet: Molecular and electronic structure of a dinuclear 

Web: www.chem.wisc.edu/~mcmahon/ 

Email: mcmahon@chem.wisc.edu 

Susanna L. Widicus Weaver, Anthony J. Remijan, Robert 

J. McMahon and Benjamin J. McCall, A search for orthobenzyne 

(O-C6H4) in CRL 618, Astrophysical Journal Letters, 

671, L153-L156 (2007). 

Jeffrey T. DePinto, Wendy A. deProphetis, Jessica L. 

Menke and Robert J. McMahon, Triplet 1,3-diphenyl- 

propynylidene (Ph-C-C-C-Ph), J. Am. Chem. Soc, 129, 2308- 

2315 (2007). 

Paul A. Bonvallet, Caroline J. Breitkreuz, Yong Seol Kim, 

Eric M. Todd, Katherine Traynor, Charles G. Fry, M. D. Ediger 

and Robert J. McMahon, Organic glass-forming materials: 

1,3,5-tris(naphthyl)benzene derivatives, J. Org. Chem, 

72, 10051-10057 (2007). 

Stephen F. Swallen, Kenneth L. Kearns, Marie K. Mapes, 

Yong Seol Kim, Robert J. McMahon, M. D. Ediger, Tian 

Wu, Lian Yu and Sushil Satija, Organic glasses with exceptional 

thermodynamic and kinetic stability, Science, 315, 

353-356 (2007). 

Caroline R. Pharr and Robert J. McMahon, Organic chemistry: 

Synthesis and study of reactive intermediates found in 

interstellar space, J. Chem. Educ, 85, 1454-1454 (2008). 

Stephen F. Swallen, Kenneth L. Kearns, Sushil Satija, 

Katherine Traynor, Robert J. McMahon and M. D. Ediger, 

Molecular view of the isothermal transformation of a stable 

glass to a liquid, J. Chem. Phys, 128, 214514 (2008). 

NELSEN, STEPHEN F. (b.1940) Professor. B.S, 

1962, University of Michigan; Ph.D, 1965, Harvard University. 

Organic Chemistry; Physical Organic Chemistry. 

Free radical, radical ion, and electron transfer reac- 

tions; lone pair effects and sigma, pi interaction effects 

on reactivity; preparation of theoretically significant 

molecules; organic electrochemistry; nuclear magnetic 

and electron spin resonance spectroscopy; computational 

chemistry. TEL: (608) 262-3426 FAX: (608) 265-4534 

Web: www.chem.wisc.edu/people/profiles/Nelsen.php 

Email: nelsen@chem.wisc.edu 

Stephen F. Nelsen, Michael N. Weaver and Joao P. Telo, 

Solvent control of charge localization in 11-bond bridged 

dinitroaromatic radical anions, J. Am. Chem. Soc, 129, 7036- 

7043 (2007). 

Stephen F. Nelsen, Michael N. Weaver and Joao P. Telo, 

Charge localization in a 17-bond mixed-valence quinone rad- 

ical anion, J. Phys. Chem. A, 111, 10993-10997 (2007). 

Stephen F. Nelsen, Michael N. Weaver, Daisuke Yama- 

zaki, Koichi Komatsu, Rajendra Rathore and Thomas Bally, 

Calculations of the optical spectra of hydrocarbon radical 

cations based on Koopmans’ theorem, J. Phys. Chem. A, 111, 

1667-1676 (2007). 

Xianghuai Wang, Guadalupe Valverde-Aguilar, Michael 

N. Weaver, Stephen F. Nelsen and Jeffrey I. Zink, Resonance 

Raman de-enhancement caused by excited state mixed va- 

chromium diazadiene complex, J. Am. Chem. Soc, 129, 

14162 (2007). 

C. R. Landis and F. Weinhold, Valence and extra-valence 

orbitals in main group and transition metal bonding, J. Comput. 

Chem, 28, 198-203 (2007). 

P. J. Thomas, Alex T. Axtell, Jerzy Klosin, Wei Peng, 

Cynthia L. Rand, Thomas P. Clark, Clark R. Landis and 

Khalil A. Abboud, Asymmetric hydroformylation of vinyl 

C. R. Pharr, Spectroscopic characterization of triplet (2and 

3-Thienyl)carbenes and development, implementation, 

and testing of a web-based tool for use in middle and high 

school classrooms. (D) 

P. S. Thomas, Matrix-isolation spectroscopy of triplet R- 

C5-R’ carbenes and interpretation of their electronic spectra. 

(D) 

lence, J. Phys. Chem. A, 111, 5441-5447 (2007). 

Belen Ferrer, Hermenegildo Garcia, Kevin P. Schultz and 

Stephen F. Nelsen, Mixed valence compounds as probes to 

determine the polarity of 1-butyl-3-methylimadazolium ionic 

liquids, J. Phys. Chem. B, 111, 13967-13970 (2007). 

Stephen F. Nelsen, Asgeir E. Konradsson, Michael N. 

Weaver, Rachel M. Stephenson, Jenny V. Lockard, Jeffrey I. 

Zink and Yi Zhao, Comparisons of measured rate constants 

acetate: Application in the synthesis of optically active isoxazolines 

and imidazoles, Org. Lett, 9, 2665-2668 (2007). 

Dimitrios A. Pantazis, Xian-Yang Chen, Clark R. Landis 

and Frank Neese, All-electron scalar relativistic basis sets for 

MOORE, JOHN W. (b.1939) Professor. B.A, 1961, 

Franklin and Marshall College; Ph.D, 1965, Northwestern 

University. NSF Fellowship, 1965, University of Cowith 

spectroscopically determined electron-transfer parameters, 

J. Phys. Chem. B, 111, 6776-6781 (2007). 

Stephen F. Nelsen, Gaoquan Li, Kevin P. Schultz, Hieu Q. 

Tran, Ilia A. Guzei and Dennis H. Evans, Alkylated trimeth-


ylene-bridged bis(p-phenylenediamines), J. Am. Chem. Soc, Amanda C. Jones, Aaron W. Sanders, William H. Sikorski, Gene E. Ananiev, Steve Goldstein, Rod Runnheim, Dan K. 

130, 11620-11622 (2008). Kristin L. Jansen and Hans J. Reich, Reactivity of the triple Forrest, Shiguo Zhou, Konstantinos Potamousis, Chris P. 

Stephen F. Nelsen, Kevin P. Schultz and Joao P. Telo, Interpretation 

of mixed-valence compound optical spectra near 

the class II/III border: Dinitrobiphenyl and dinitrophenanthrene 

radical anions, J. Phys. Chem. A, 112, 12622-12628 

(2008). 

Guadalupe Valverde-Aguilar, Xianghuai Wang, Edward 

Plummer, Jenny V. Lockard, Jeffrey I. Zink, Yun Luo, Michael 

N. Weaver and Stephen F. Nelsen, Tuning aryl, hydrazine 

radical cation electronic interactions using substitutent 

effects, J. Phys. Chem. A, 122, 7332-7341 (2008). 

Weiwei Zhang, Wenjuan Zhu, WanZhen Liang, Yi Zhao 

and Stephen F. Nelsen, Ab initio calculations on the intramolecular 

electron transfer rates of a bis(hydrazine) radical cation, 

J. Phys. Chem. B, 112, 11079-11086 (2008). 

Gaochen Li, Developments of new mixed valence compounds 

for optoelectronics and molecular electronics through 

multistep organic synthesis. (D) 

Kevin P. Schultz, Valence-trapped to valence-delocalized 

mixed-valence systems by bridge state modification. (D) 

RECORD, M. THOMAS JR. (b.1942) Professor. 

B.A, 1964, Yale University; Ph.D, 1967, University of 

California-San Diego. Postdoctoral Fellow, 1967, Uni- 

versity of California, San Diego; NSF Postdoctoral Fellowship, 

1968, Stanford University. Biochemistry; Biophysics/Biophysical 

Chemistry. Biophysical chemistry of 

nucleic acids, proteins; polyelectrolyte properties of 

DNA; thermodynamics of interactions of solutes and 

salts with proteins and nucleic acids, interpretation of so- 

lute and salt effects on biopolymer processes; kinetics 

and mechanism of RNA polymerase-promoter interactions 

in transcription initiation and its regulation; charac- 

terization of E.coli as an osmotic system. TEL: (608) 

262-5332 FAX: (608) 262-3453 

Web: www.biochem.wisc.edu 

Email: record@biochem.wisc.edu 

record@chem.wisc.edu 

Laurel M. Pegram and M. Thomas Record, Jr, Hofmeister 

Salt Effects on Surface Tension Arise from Partitioning of 

Anions and Cations between Bulk Water and the Air-Water 

ion and separated ion pair of tris(trimethylsilyl)methyllithium 

with aldehydes: A RINMR study, J. Am. Chem. Soc, 130, 

6060 (2008). 

Kristopher J. Kolonko and Hans J. Reich, Stabilization of 

ketone and aldehyde enols by formation of hydrogen bonds 

to phosphazene enolates and their aldol products, J. Am. 

Chem. Soc, 130, 9668 (2008). 

Amanda C. Jones, Rapid injection NMR and organolithium 

reactivity. (D) 

SCHMIDT, JORDAN R. Assistant Professor. B.S, 

2001, Hope College; Ph.D, 2006, University of Wisconsin. 

Postdoctoral Associate, 2006-2008, Yale University. 

Computational Chemistry; Theoretical Chemistry. Theoretical 

and computational chemistry; the study of com- 

plex molecular systems, including metal-organic frame- 

works, catalytic systems, and a variety of other potential 

systems in both the solid and liquid phase, using a com- 

bination of atomistic simulation and electronic structure 

techniques; development of novel computational techniques 

and algorithms, including new quantum-mechanical/molecular-mechanical 

(QM/MM) methods and constrained 

density functional theory. TEL: (608) 262-2996 

FAX: (608) 262-9918 

Web: www.chem.wisc.edu/users/schmidt 

Email: schmidt@chem.wisc.edu 

J. R. Schmidt, S. T. Roberts, J. J. Loparo, A. Tokmakoff, 

M. D. Fayer and J. L. Skinner, Are water simulation models 

consistent with steady-state and ultrafast vibrational spectroscopy 

experiments?, Chem. Phys, 341, 143-157 (2007). 

J. R. Schmidt and John C. Tully, Path-integral simulations 

beyond the adiabatic approximation, J. Chem. Phys, 127 

(2007). 

R. Kumar, J. R. Schmidt and J. L. Skinner, Hydrogen 

bonding definitions and dynamics in liquid water, J. Chem. 

Phys, 126 (2007). 

B. Auer, R. Kumar, J. R. Schmidt and J. L. Skinnert, Hy- 

drogen bonding and Raman, IR, and 2D-IR spectroscopy of 

dilute HOD in liquid D2O, Proc. Natl. Acad. Sci. U. S. A, 

104, 14215-14220 (2007). 

Churas, Veit Bergendahl, James A. Thomson and David C. 

Schwartz, Optical mapping discerns genome wide DNA 

methylation profiles, Bmc Molecular Biology, 9 (2008). 

David C. lzmitli, Michael D. Schwartz, Michael D. Gra- 

ham and Juan J. de Pablo, The effect of hydrodynamic inter- 

actions on the dynamics of DNA translocation through pores, 

J. Chem. Phys, 128 (2008). 

J. M. Kidd, G. M. Cooper, W. F. Donahue, H. S. Hayden, 

N. Sampas, T. Graves, N. Hansen, B. Teague, C. Alkan, F. 

Antonacci, E. Haugen, T. Zerr, N. A. Yamada, P. Tsang, T. 

L. Newman, E. Tüzün, Z. Cheng, H. M. Ebling, N. Tusneem, 

R. David, W. Gillett, K. A. Phelps, M. Weaver, D. Saranga, 

A. Brand, W. Tao, E. Gustafson, K. McKernan, L. Chen, M. 

Malig, J. D. Smith, J. M. Korn, S. A. McCarroll, D. A. Altshuler, 

D. A. Peiffer, M. Dorschner, J. Stamatoyannopoulos, D. 

Schwartz, D. A. Nickerson, J. C. Mullikin, R. K. Wilson, L. 

Bruhn, M. V. Olson, R. Kaul, D. R. Smith and E. E. Eichler, 

Mapping and sequencing of structural variation from eight 

human genomes, Nature, 453, 56-64 (2008). 

SHAKHASHIRI, BASSAM Z. (b.1939) Professor, 

William T. Evjue Distinguished Chair for the Wisconsin 

Idea. B.A, 1960, Boston University; M.Sc, 1965, University 

of Maryland; Ph.D, 1968, University of Maryland; 

Doctor of Public Service, (Hon.), 1988, The George 

Washington University; Doctor of Human Letters, (Hon. 

), 1988, Illinois State University; Doctor of Science, 

(Hon.), 1991, Ripon College; Doctor of Science, (Hon.), 

1992, University of Colorado; Doctor of Science, (Hon.), 

1993, Grand Valley State University; D.Sc.(Hon), 2007, 

University of South Carolina. Research Associate, 1967- 

1968, University of Illinois. Chemistry Education. R&D 

on demonstrations/experiments for communicating 

chemistry in formal and informal settings; effective policies 

for achieving both scientific literacy and science literacy; 

explore and cultivate intellectual and emotional 

links between science, the arts, and the humanities; electronic 

and print media programming. TEL: (608) 262- 

0538 FAX: (608) 262-8634 

Web: www.scifun.org 

Interface, J. Phys. Chem. B, 111, 5411-5417 (2007). 

Jonathan G. Cannon, Charles F. Anderson and M. Thomas 

Record, Jr, Urea-Amide Preferential Interactions in Water: 

J. R. Schmidt, Neil Shenvi and John C. Tully, Controlling 

spin contamination using constrained density functional, J. 

Chem. Phys, 129 (2008). 

Email: bassam@chem.wisc.edu 

No publication information submitted for this edition. 

Quantitative Comparison of Model Compound Data with 

Biopolymer Results Using Water Accessible Surface Areas, 

J. Phys. Chem. B, 111, 9675-9685 (2007). 

M. C. Konopka, J. C. Weisshaar and M. T. Record Jr, 

J. R. Schmidt, Priya V. Parandekar and John C. Tully, 

Mixed quantum-classical equilibrium: Surface hopping, J. 

Chem. Phys, 129 (2008). 

J. R. Schmidt and S. A. Corcelli, Infrared absorption line 

SHEN, BEN —See Medicinal and/or Pharmaceutical 



Methods of changing biopolymer volume fraction and cyto- shapes in the classical limit: A comparison of the classical diplasmic 

solute concentrations for in vivo biophysical studies, 

Methods in Enzymology, 428, 487-504 (2007). 

C. A. Davis, C. Bingman, R. Landick, M. T. Record Jr. and 

R. M. Saecker, Real-time footprinting of DNA in the first kinetically-significant 

intermediate in open complex formation 

by E. Coli RNA polymerase, Proc. Natl. Acad. Sci. USA, 

104, 7833-7838 (2007). 

L. M. Pegram and M. T. Record Jr, Quantifying accumulation 

or exclusion of H+, HO-, and Hofmeister salt ions near 

interfaces, Chem. Phys. Lett, 467, 1-8 (2008). 

K. A. Vander Meulen, J. H. Davis, T. R. Foster, M. T. Record 

Jr. and S. E. Butcher, Thermodynamics and folding pathway 

of tetraloop receptor-mediated RNA helical packing, J 

Mol Biol, 384, 702-717 (2008). 

L. M. Pegram and M. T. Record Jr, Thermodynamic origin 

of Hofmeister ion effects, J Phys Chem B, 112, 9428-9436 

(2008). 

W. S. Kontur, R. M. Saecker, M. W. Capp and M. T. Rec- 

ord Jr, Late steps in the formation of E. Coli RNA polymerase-lambdapr 

promoter open complexes: Characterization 

of conformational changes by rapid [perturbant] upshift 

experiments, J. Mol. Biol, 376, 1034-1047 (2008). 

J. Koh, R. M. Saecker and M. T. Record Jr, DNA binding 

mode transitions of Escherichia coli HU(alphabeta): Evidence 

for formation of a bent DNA—protein complex on intact, 

linear duplex DNA, J. Mol. Biol, 383, 324-346 (2008). 

Kirk A. Vander Meulen, Ruth M. Saecker and M. Thomas 

Record, Jr, Formation of a Wrapped DNA-Protein Interface: 

Experimental Characterization and Analysis of the Large 

Contributions of Ions and Water to the Thermodynamics of 

Binding IHF to H’ DNA, J. Mol. Biol, 377, 9-27 (2008). 

REICH, HANS J. (b.1943) Professor. B.Sc, 1964, 

University of Alberta; Ph.D, 1968, University of Calif., 

Los Angeles. NRC Fellow, 1969, California Institute of 

Technology; Postdoctoral Fellow, 1970, Harvard University. 

Organic Chemistry; Organometallic Chemistry. 

Main group organometallic chemistry. Structure, reactivity 

and stereochemistry of organolithium reagents. Applications 

of silicon, tin, selenium and sulfur reagents in 

organic synthesis. NMR spectroscopy. TEL: (608) 262- 

5794 FAX: (608) 265-4534 

Web: www.chem.wisc.edu/areas/reich/index.htm 

Email: reich@chem.wisc.edu 

Ilia A. Guzei, Kristopher J. Kolonko and Hans J. Reich, 

pole and fluctuating frequency approximations, J. Chem. 

Phys, 128 (2008). 

Jill Zwickl, Neil Shenvi, J. R. Schmidt and John C. Tully, 

Transition state barriers in multidimensional marcus theory, 

J. Phys. Chem. A, 112, 10570-10579 (2008). 

Neil Shenvi, J. R. Schmidt, Stephen T. Edwards and John 

C. Tully, Efficient discretization of the continuum through 

complex contour deformation, Physical Review A, 78 (2008). 

SCHWARTZ, DAVID C. (b.1954) Professor. B.A, 

1976, Hampshire College; Ph.D, 1985, Columbia University. 

Analytical Chemistry. Physical, chemical and biological 

investigation of new single-molecule effects and 

their development into automated approaches to genome 

analysis using fluorescence imaging, engineered surface- 

chemistries environments and algorithmic analysis. TEL: 

(608) 265-0546 FAX: (608) 265-6743 

Web: www.lmcg.wisc.edu 

Email: dcschwartz@facstaff.wisc.edu 

Tian Wu and David C. Schwartz, Transchip: Single-molecule 

detection of transcriptional elongation complexes, Anal. 

Biochem, 361, 31-46 (2007). 

Shiguo Zhou, Michael C. Bechner, Michael Place, Chris P. 

Churas, Louise Pape, Sally A. Leong, Rod Runnheim, Dan 

K. Forrest, Steve Goldstein, Miron Livny and David C. 

Schwartz, Validation of rice genome sequence by optical 

mapping, Bmc Genomics, 8 (2007). 

S. Zhou, M. C. Bechner, M. Place, C. P. Churas, L. Pape, 

S. A. Leong, R. Runnheim, D. K. Forrest, S. Goldstein, M. 

Livny and D. C. Schwartz, Validation of rice genome sequence 

by optical mapping, BMC Genomics, 8, 278 (2007). 

Thomas A. Knotts, Nitin Rathore, David C. Schwartz and 

Juan J. de Pablo, A coarse grain model for DNA, J. Chem. 

Phys, 126 (2007). 

H. Li, A. Valouev, D. C. Schwartz, M. S. Waterman and L. 

M. Li, A quantile method for sizing optical maps, J. Compu- 

tational Biology, 14, 255-266 (2007). 

Jill Herschleb, Gene Ananiev and David C. Schwartz, 

Pulsed-field gel electrophoresis, Nature Protocols, 2, 677- 

684 (2007). 

Kyubong Jo, Dalia M. Dhingra, Theo Odijk, Juan J. de Pablo, 

Michael D. Graham, Rod Runnheim, Dan Forrest and 

David C. Schwartz, A single-molecule barcoding system using 

nanoslits for DNA analysis, Proc. Natl. Acad. Sci. U. S. 

A, 104, 2673-2678 (2007). 

SIBERT, EDWIN L., III (b.1956) Professor. B.A, 

1978, Colgate University; Ph.D, 1983, University of Colorado. 

NATO Fellow, 1983-1984, University of Oxford; 

Miller Research Fellowship, 1985-1986, University of 

California, Berkeley. Physical Chemistry. Dynamics and 

spectroscopy of intramolecular vibrational energy transfer 

in both the gas and liquid phases; proton transfer reactions; 

mode specific effects in chemical dynamics; 

classical and semiclassical descriptions of molecular vi- 

brations; perturbative treatments of vibrations and rotations; 

Jahn-Teller induced vibrational dynamics; predis- 

sociation studies of small molecules. TEL: (608) 262- 

0265 FAX: (608) 262-9918 

Web: www.chem.wisc.edu/~sibert/ 

Email: sibert@chem.wisc.edu 

George L. Barnes and Edwin L. Sibert III, Elucidating energy 

disposal pathways following excitation of the symmetric 

OH stretching band in formic acid dimer, Chem. Phys. Lett, 

460, 42-45 (2008). 

George L. Barnes and Edwin L. Sibert III, The effects of 

asymmetric motions on the tunneling splittings in formic acid 

dimer, J. Chem. Phys, 129 (2008). 

George L. Barnes and Edwin L. Sibert III, An equilibrium 

focused approach to calculating the Raman spectrum of the 

symmetric OH stretch in formic acid dimer, J. Mol. Spectrosc, 

249, 78-85 (2008). 

Edwin L. Sibert, Sai G. Ramesh and Tolga S. Gulmen, 

Vibrational relaxation of OH and CH fundamentals of polar 

and nonpolar molecules in the condensed phase, J. Phys. 

Chem. A, 112, 11291-11305 (2008). 

Y. S. Lin, S. G. Ramesh, J. M. Shorb, E. L. Sibert III and J. 

L. Skinner, Vibrational energy relaxation of the bend fundamental 

of dilute water in liquid chloroform and d-chloroform, 

J. Phys. Chem. B, 112, 390-398 (2008). 

George L. Barnes, Shane M. Squires and Edwin L. Sibert 

III, Symmetric double proton tunneling in formic acid dimer: 

A diabatic basis approach, J. Phys. Chem. B, 112, 595-603 

(2008). 

Edwin L. Sibert, Eduardo Vergini, Rosa M. Benito and 

Florentino Borondo, Quantum localization through interference 

on homoclinic and heteroclinic circuits, New J. Phys, 

10, 053016 (2008). 

George L. Barnes, Vibrational effects on symmetric and 

Unexpected crystallization of 1,3-bis(4fluorophenyl)propan- Hua Yu and David C. Schwartz, Imaging and analysis of asymmetric proton tunneling in formic acid dimer. (D) 

2-one in paratone oil, Acta Crystallographica Section E- transcription on large, surface-mounted single template DNA Sai G. Ramesh, Spectroscopy and dynamics of haloforms 

Structure Reports Online, 63, O4094-U3459 (2007). molecules, Anal. Biochem, 380, 111-121 (2008). in the gas and condensed phases. (D)


SKINNER, JAMES L. (b.1953) Professor. B.A, 1975, Hyun S. Kim, Hua Qin, Michael S. Westphall, Lloyd M. Denis A. Kissounko, Justin M. Hoerter, Ilia A. Guzei, 

University of California at Santa Cruz; M.A, 1977, Har- Smith and Robert H. Blick, Field emission from a single na- Qiang Cui, Samuel H. Gellman and Shannon S. Stahl, Ti-IVvard 

University; Ph.D, 1979, Harvard University. NSF 

Postdoctoral Fellowship, 1980, Stanford University. 

Physical Chemistry; Theoretical Chemistry. Theoretical 

chemistry of condensed phases; nonequilibrium statistical 

mechanics; chemical reaction dynamics; dephasing 

and relaxation processes; exciton and electron transport; 

linear and nonlinear spectroscopy of liquids and supercritical 

fluids, amorphous and crystalline solids, surfaces 

and proteins. TEL: (608) 262-0481 FAX: (608) 262- 

9918 

Web: www.chem.wisc.edu/users/skinner 

Email: skinner@chem.wisc.edu 

nomechanical pillar, Nanotechnology, 18 (2007). 

Xu Zhang, Mark Scalf, Michael S. Westphall and Lloyd 

M. Smith, Membrane protein separation and analysis by supercritical 

fluid chromatography-mass spectrometry, Anal. 

Chem, 80, 2590-2598 (2008). 

Michael S. Westphall, Kaveh Jorabchi and Lloyd M. 

Smith, Mass spectrometry of acoustically levitated droplets, 

Anal. Chem, 80, 5847-5853 (2008). 

Ji Eun Lee, Shama P. Mirza, Daniela N. Didier, Mark 

Scalf, Michael Olivier, Andrew S. Greene and Lloyd M. 

Smith, Identification of cell surface markers to differentiate 

rat endothelial and fibroblast cells using lectin arrays and 

LC-ESI-MS/MS, Anal. Chem, 80, 8269-8275 (2008). 

mediated reactions between primary amines and secondary 

carboxamides: Amidine formation versus transamidation, J. 

Am. Chem. Soc, 129, 1776-1783 (2007). 

Brian V. Popp and Shannon S. Stahl, Insertion of molecu- 

lar oxygen into a palladium-hydride bond: Computational ev- 

idence for two nearly isoenergetic pathways, J. Am. Chem. 

Soc, 129, 4410-4422 (2007). 

Guosheng Liu and Shannon S. Stahl, Two-faced reactivity 

of alkenes: Cis-versus trans-aminopalladation in aerobic pd- 

catalyzed intramolecular Aza-Wacker reactions, J. Am. 

Chem. Soc, 129, 6328-6335 (2007). 

Michelle M. Rogers, Vasily Kotov, Jaruwan Chatwichien 

and Shannon S. Stahl, Palladium-catalyzed oxidative amina- 

J. R. Schmidt, S. T. Roberts, J. J. Loparo, A. Tokmakoff, Julie K. Freed, Michael R. Shortreed, Christopher J. Klee- tion of alkenes: Improved catalyst reoxidation enables the 

M. D. Fayer and J. L. Skinner, Are water simulation models 

consistent with steady-state and ultrafast vibrational spectroscopy 

experiments?, Chem. Phys, 341, 143-157 (2007). 

B. M. Auer and J. L. Skinner, Dynamical effects in line 

shapes for coupled chromophores: Time-averaging approximation, 

J. Chem. Phys, 127, 104105 (2007). 

R. Kumar, J. R. Schmidt and J. L. Skinner, Hydrogen 

bonding definitions and dynamics in liquid water, J. Chem. 

Phys, 126, 204107 (2007). 

B. Auer, R. Kumar, J. R. Schmidt and J. L. Skinner, Hydrogen 

bonding and Raman, IR, and 2D-IR spectroscopy of 

dilute HOD in liquid D2O, Proc. Natl. Acad. Sci. U. S. A, 

104, 14215-14220 (2007). 

B. M. Auer and J. L. Skinner, Vibrational sum-frequency 

spectroscopy of the liquid/vapor interface for dilute HOD in 

D2O, J. Chem. Phys, 129, 214705 (2008). 

B. M. Auer and J. L. Skinner, IR and Raman spectra of liquid 

water: Theory and interpretation, J. Chem. Phys, 128, 

224511 (2008). 

Y. S. Lin, S. G. Ramesh, J. M. Shorb, E. L. Sibert III and J. 

L. Skinner, Vibrational energy relaxation of the bend fundamental 

of dilute water in liquid chloroform and D-chloroform, 

J. Phys. Chem. B, 112, 390-398 (2008). 

R. Kumar and J. L. Skinner, Water simulation model with 

explicit three-molecule interactions, J. Phys. Chem. B, 112, 

8311-8318 (2008). 

J. L. Skinner, Vibrational line shapes and spectral diffusion 

in fluids, Mol. Phys, 106, 2245-2253 (2008). 

David E. Moilanen, Emily E. Fenn, Yu-Shan Lin, J. L. 

Skinner, B. Bagchi and Michael D. Fayer, Water inertial reorientation: 

Hydrogen bond strength and the angular potential, 

Proc. Natl. Acad. Sci. U. S. A, 105, 5295-5300 (2008). 

B. M. Auer, Vibrational spectroscopy of water in the bulk 

and at the liquid/vapor interface. (D) 

R. Kumar, Understanding and modelling hydrogen bonding 

in liquid water. (D) 

SMITH, LLOYD M. (b.1954) Professor. B.A, 1976, 

University of California, Berkeley; Ph.D, 1981, Stanford 

University. Postdoctoral Research Fellowship, 1981, 

Stanford University; Postdoctoral Research Fellowship, 

1982-1985, California Institute of Technology; Senior 

Research Fellow, 1985-1987, California Institute of 

Technology. Analytical Chemistry. The Smith group is 

an interdisciplinary group of researchers working on the 

development of novel methods and approaches for the 

analysis and manipulation of biomolecules. Major interest 

areas include biological mass spectrometry, surface 

chemistry, surface detection methods (fluorescence, surface 

plasmon resonance), and the analysis of genetic 

variations. TEL: (608) 263-2594 FAX: (608) 265-6780 

fisch, Lloyd M. Smith and Andrew S. Greene, Revealing the 

role of phosphatidylserine in shear stress-mediated protection 

in endothelial cells, Endothelium-Journal of Endothelial Cell 

Research, 15, 225-230 (2008). 

Brian L. Frey, Casey J. Krusemark, Aaron R. Ledvina, 

Joshua J. Coon, Peter J. Belshaw and Lloyd M. Smith, Ionion 

reactions with fixed-charge modified proteins to produce 

ions in a single, very high charge state, Int. J. Mass spectrom, 

276, 136-143 (2008). 

Matthew R. Lockett, Stephen C. Weibel, Margaret F. Phillips, 

Michael R. Shortreed, Bin Sun, Robert M. Corn, Robert 

J. Hamers, Franco Cerrina and Lloyd M. Smith, Carbon-onmetal 

films for surface plasmon resonance detection of DNA 

arrays, J. Am. Chem. Soc, 130, 8611-8613 (2008). 

Lloyd M. Smith, Is charge reduction in ESI really necessary?, 

J. Am. Soc. Mass. Spectrom, 19, 629-631 (2008). 

Kaveh Jorabchi, Michael S. Westphall and Lloyd M. 

Smith, Charge assisted laser desorption/ionization mass spectrometry 

of droplets, J. Am. Soc. Mass. Spectrom, 19, 833- 

840 (2008). 

Justin K. Murray, Jack D. Sadowsky, Mark Scalf, Lloyd 

M. Smith, York Tomita and Samuel H. Gellman, Exploration 

of structure—Activity relationships among foldamer ligands 

for a specific protein binding site via parallel and split-andmix 

library synthesis, J. Comb. Chem, 10, 204-215 (2008). 

Matthew R. Lockett, Margaret F. Phillips, Jessica L. Jarecki, 

Dora Peelen and Lloyd M. Smith, A tetrafluorophenyl 

activated ester self-assembled monolayer for the immobilization 

of amine-modified oligonucleotides, Langmuir, 24, 69- 

75 (2008). 

Matthew R. Lockett, Michael R. Shortreed and Lloyd M. 

Smith, Aldehyde-terminated amorphous carbon substrates for 

the fabrication of biomolecule arrays, Langmuir, 24, 9198- 

9203 (2008). 

Margaret F. Phillips, Matthew R. Lockett, Matthew J. Ro- 

desch, Michael R. Shortreed, Franco Cerrina and Lloyd M. 

Smith, In situ oligonucleotide synthesis on carbon materials: 

Stable substrates for microarray fabrication, Nucleic Acids 

Res, 36, January e7 (2008). 

Mark E. Levenstein, W. Travis Berggren, Ji Eun Lee, Kevin 

R. Conard, Rachel A. Llanas, Ryan J. Wagner, Lloyd M. 

Smith and James A. Thomson, Secreted proteoglycans directly 

mediate human embryonic stem cell-basic fibroblast 

growth factor 2 interactions critical for proliferation, Stem 

Cells, 26, 3099-3107 (2008). 

J. B. Mandir, Rapid determination of RNA accessible sites. 

(D) 

J. E. Lee, Cell surface proteome characterization using 

cell-binding arrays and mass spectrometry. (D) 

M. F. Phillips, Towards a high-throughput surface invasive 

cleavage assay using the maskless array synthesizer. (D) 

X. Zhang, Biological mass spectrometry for proteome 

use of alkene as the limiting reagent, Org. Lett, 9, 4331-4334 

(2007). 

J. Brian Hewgley, Shannon S. Stahl and Marisa C. Kozlowski, 

Mechanistic study of asymmetric oxidative biaryl 

coupling: Evidence for self-processing of the copper catalyst 

to achieve control of oxidase vs oxygenase activity, J. Am. 

Chem. Soc, 130, 12232-12233 (2008). 

Michael M. Konnick and Shannon S. Stahl, Reaction of 

molecular oxygen with a Pd-II-hydride to produce a Pd-IIhydroperoxide: 

Experimental evidence for an HX-reductive- 

elimination pathway, J. Am. Chem. Soc, 130, 5753-5762 

(2008). 

Justin M. Hoerter, Karin M. Otte, Samuel H. Gellman, 

Qiang Cui and Shannon S. Stahl, Discovery and mechanistic 

study of Al-III-catalyzed transamidation of tertiary amides, J. 

Am. Chem. Soc, 130, 647-654 (2008). 

Tetsuya Hamada, Xuan Ye and Shannon S. Stahl, Copper- 

catalyzed aerobic oxidative amidation of terminal alkynes: 

Efficient synthesis of ynamides, J. Am. Chem. Soc, 130, 833- 

835 (2008). 

Lauren M. Huffman and Shannon S. Stahl, Carbon-nitro- 

gen bond formation involving well-defined aryl-copper(III) 

complexes, J. Am. Chem. Soc, 130, 9196-9197 (2008). 

Myung-ryul Lee, Shannon S. Stahl and Samuel H. Gell- 

man, Synthesis of beta-lactams bearing functionalized side 

chains from a readily available precursor, Org. Lett, 10, 

5317-5319 (2008). 

Bradley A. Steinhoff, Mechanistic studies of palladiumcatalyzed 

aerobic alcohol oxidation. (D) 

Brian V. Popp, Experimental and computational studies of 

the reaction of molecular oxygen with reduced palladium 

species. (D) 

Christopher C. Scarborough, 1. Axially-Chiral 7-Membered 

N-Heterocyclic Carbenes: Synthesis and application to 

palladium-catalyzed intramolecular aerobic oxidation of ole- 

fins. 2. Development of palladium-catalyzed aerobic oxidative 

olefin amination reactions. (D) 

Jodie L. Brice, Palladium-catalyzed amination of olefins: 

Method development and application. (D) 

Michelle M. Rogers, Development of palladium(II)-catalyzed 

methods for alkene functionalization: Intermolecular 

oxidative alkylation and intra- and intermolecular oxidative 

amination. (D) 

Sarah E. Eldred, Catalytic transamidation and the study of 

poly-beta-peptide materials. (D) 

TREICHEL, PAUL M. JR. (b.1936) Professor (emeritus). 

B.S, 1958, University of Wisconsin; M.A, 1960, 

Harvard University; Ph.D, 1962, Harvard University. 

NSF Fellowship, 1962-1963, University of London, 

Queen Mary College. Chemistry Education; Inorganic 

Web: www.chem.wisc.edu/~smith/ analysis. (D) 

Chemistry. TEL: (608) 262-8828 FAX: (608) 262-6143 

Email: smith@chem.wisc.edu Web: www.chem.wisc.edu/people/profiles/Treichel.php 

Ji Eun Lee, Daniela N. Didier, Matthew R. Lockett, Mark STAHL, SHANNON S. (b.1970) Professor. B.S, Email: treichel@chem.wisc.edu 

Scalf, Andrew S. Greene, Michael Olivier and Lloyd M. 

Smith, Characterization of vascular endothelial growth factor 

receptors on the endothelial cell surface during hypoxia using 

whole cell binding arrays, Anal. Biochem, 369, 241-247 

(2007). 

Shane M. Lamos, Michael R. Shortreed, Brian L. Frey, Peter 

J. Belshaw and Lloyd M. Smith, Relative quantification 

of carboxylic acid metabolites by liquid chromatography— 

Mass spectrometry using isotopic variants of cholamine, 

Anal. Chem, 79, 5143-5149 (2007). 

Siyuan Chen, Ting Zheng, Michael R. Shortreed, Caroline 

Alexander and Lloyd M. Smith, Analysis of cell surface carbohydrate 

expression patterns in normal and tumorigenic human 

breast cell lines using lectin arrays, Anal. Chem, 79, 

5698-5702 (2007). 

Ryan T. Hilger, Michael S. Westphal and Lloyd M. Smith, 

Controlling charge on levitating drops, Anal. Chem, 79, 

6027-6030 (2007). 

Matthew R. Lockett, Michael R. Shortreed and Lloyd M. 

Smith, Molecular beacon-style hybridization assay for quantitative 

analysis of surface invasive cleavage reactions, Anal. 

1992, University of Illinois at Urbana-Champaign; Ph.D, 

1997, California Institute of Technology. NSF Postdoc- 

toral Fellow, 1997-1999, Massachusetts Institute of 

Technology. Inorganic Chemistry; Organic Chemistry. 

Catalysis for chemical synthesis and energy applications, 

mechanistic organometallic, organic and inorganic chem- 

istry, synthetic methods, oxidation reactions with molecular 

oxygen. TEL: (608) 265-6288 FAX: (608) 262-6143 

Web: www.chem.wisc.edu/~stahl/ 

Email: stahl@chem.wisc.edu 

Brian V. Popp, Johanna E. Wendlandt, Clark R. Landis 

and Shannon S. Stahl, Reaction of molecular oxygen with an 

NHC-coordinated Pd-0 complex: Computational insights and 

experimental implications, Angewandte Chemie-International 

Edition, 46, 601-604 (2007). 

Christen M. Bell, Denis A. Kissounko, Samuel H. Gellman 

and Shannon S. Stahl, Catalytic metathesis of simple secondary 

amides, Angewandte Chemie-International Edition, 46, 

761-763 (2007). 

Vasily Kotov, Christopher C. Scarborough and Shannon S. 


VAUGHAN, WORTH E. Emeritus Professor. TEL: 

(608) 262-1486 FAX: (608) 262-3160 


WEINHOLD, FRANK A. (b.1941) Professor of 

Chemistry, Emeritus. B.A, 1962, University of Colorado; 

M.A, 1964, Harvard University; Ph.D, 1967, Harvard 

University. NSF Postdoctoral Fellowship, 1967-1968, 

Oxford University, England; Miller Institute Fellowship, 

1968-1969, University of California, Berkeley. Theoreti- 

cal Chemistry. Ab initio theory of molecular structure 

and interactions; wavefunction analysis methods; noncovalent 

interactions; theory of liquids. TEL: (608) 262- 

0263 FAX: (608) 262-9918 

Web: www.chem.wisc.edu/people/profiles/Weinhold. 

php 

Email: weinhold@chem.wisc.edu 

Chem, 79, 6031-6036 (2007). Stahl, Palladium-catalyzed aerobic oxidative amination of al- Heriberto Hernandez-Soto, Frank Weinhold and Joseph S. 

Hua Qin, Hyun-Seok Kim, Robert H. Blick, Michael S. kenes: Development of intra- and intermolecular Aza-Wack- Francisco, Radical hydrogen bonding: Origin of stability of 

Westphall and Lloyd M. Smith, Subthreshold field emission er reactions, Inorg. Chem, 46, 1910-1923 (2007). radical-molecule complexes, J. Chem. Phys, 127 (2007). 

from thin silicon membranes, Appl. Phys. Lett, 91 (2007). Brendan P. Mowery, Sarah E. Lee, Denis A. Kissounko, C. R. Landis and F. Weinhold, Valence and extra-valence 

Ting Zheng, Hongmei Yu, Caroline M. Alexander, David Raquel F. Epand, Richard M. Epand, Bernard Weisblum, orbitals in main group and transition metal bonding, J. Com- 

J. Beebe and Lloyd M. Smith, Lectin-modified microchan- Shannon S. Stahl and Samuel H. Gellman, Mimicry of anti- put. Chem, 28, 198-203 (2007). 

nels for mammalian cell capture and purification, Biomed. microbial host-defense peptides by random copolymers, J. M. J. Bell, K. C. Lau, M. J. Krisch, D. I. G. Bennett, L. J. 

Microdevices, 9, 611-617 (2007). Am. Chem. Soc, 129, 15474-15746 (2007). Butler and F. Weinhold, Characterization of the methoxy car-


bonyl radical formed via photolysis of methyl chloroformate for organosilicon compounds, Kagaku to Kogyo, 61, 1059- molecular dynamics simulation study, J. Chem. Phys, 126, 

at 193.3 nm, J. Phys. Chem. A, 111, 1762-1770 (2007). 1061 (2008). 174906/1-174906/8 (2007). 

Larissa A. Leites, Gaidar I. Magdanurov, Sergey S. Buka- Xiao Zhu, Arun Yethiraj and Qiang Cui, Establishing ef- 

WEISSHAAR, JAMES C. (b.1952) Professor. B.S, 

1974, Michigan State University; Ph.D, 1979, University 

of California at Berkeley. JILA Postdoctoral Fellow, 

1980, University of Colorado. Biophysics/Biophysical 

Chemistry. Protein diffusion in live E. coli, including effects 

of osmotic stress. Real-time antimicrobial peptide 

action on bacterial membranes. In vitro SNARE-driven 

vesicle fusion assays. Single-molecule fluorescence studies 

of protein diffusion in model membranes and in live 

cells. Sub-diffraction-limit fluorescence microscopy. 

TEL: (608) 262-0266 FAX: (608) 262-0453 

Web: www.chem.wisc.edu/~weisshaar/ 

Email: weisshaar@chem.wisc.edu 

Arun Yethiraj and James C. Weisshaar, Why are lipid rafts 

not observed in vivo?, Biophys. J, 93, 3113-3119 (2007). 

M. C. Konopka, J. C. Weisshaar and M. T. Record, Methods 

of changing biopolymer volume fraction and cytoplasmic 

solute concentrations for in vivo biophysical studies, Osmosensing 

and Osmosignaling, 428, 487-504 (2007). 

Tingting Liu, Tingting Wang, Edwin R. Chapman and 

James C. Weisshaar, Productive hemifusion intermediates in 

fast vesicle fusion driven by neuronal SNAREs, Biophys. J, 

94, 1303-1314 (2008). 

WEST, ROBERT (b.1928) Professor Emeritus. B.A, 

1950, Cornell University; M.A, 1952, Harvard Universi- 

ty; Ph.D, 1954, Harvard University; D.Sc, 1995, Technical 

University of Iasi. Inorganic Chemistry; Organometallic 

Chemistry. Organosilicon and organogermanium 

chemistry: Silylenes, germylenes, multiply-bonded sili- 

con and germanium compounds, polysilanes, polysiloxanes, 

siloles and germoles,organosilicon electrolytes, 

silicon-containing drug molecules. TEL: (608) 

262-1873 FAX: (608) 262-6143 

Web: www.chem.wisc.edu/~osirc/ 

Email: rwest@silatronix.com 

west@chem.wisc.edu 

Lingzhi Zhang, Galina A. Bikzhanova and Robert West, 

[2-(Hydroxyethoxy)ethyl]trimethylammonium iodide, Acta 

Crystallogr., Sect. E: Struct. Rep. Online, E63, o2284-o2285 

(2007). 

Kiu-Yuen Tse, Lingzhi Zhang, Sarah E. Baker, Beth M. 

Nichols, Robert West and Robert J. Hamers, Vertically 

Aligned Carbon Nanofibers Coupled with Organosilicon 

Electrolytes: Electrical Properties of a High-Stability Nanostructured 

Electrochemical Interface, Chem. Mater, 19, 5734- 

5741 (2007). 

Stephen Gately and Robert West, Novel therapeutics with 

enhanced biological activity generated by the strategic introduction 

of silicon isosteres into known drug scaffolds, Drug 

Dev. Res, 68, 156-163 (2007). 

Larissa A. Leites, Gaidar I. Magdanurov, Sergey S. Bukalov, 

Steven P. Nolan, Natalie M. Scott and Robert West, Vibrational 

and electronic spectra and the electronic structure of 

an unsaturated Arduengo-type carbene, Mendeleev Commun, 

17, 92-94 (2007). 

Yuxia Liu, Stephen A. Steiner, III, Cameron W. Spahn, Ilia 

A. Guzei and Robert West, A Stable, Highly Fluorescent Vinylogous 

�-Diketonate Silicon Complex, Organometallics, 

26, 1306-1307 (2007). 

Galina A. Bikzhanova, Irina S. Toulokhonova, Stephen 

Gately and Robert West, Novel silicon-containing drugs derived 

from the indomethacin scaffold: Synthesis, characterization 

and evaluation of biological activity, Silicon Chem, 3, 

209-217 (2007). 

Vitaliy I. Timokhin, Ilia A. Guzei and Robert West, Unex- 

pected synthesis of a naphthylsilole, Silicon Chem, 3, 239- 

242 (2007). 

Zhengcheng Zhang, Leslie J. Lyons, Ryan West, Khalil 

Amine and Robert West, Synthesis and ionic conductivity of 

mixed substituted polysiloxanes with oligoethyleneoxy and 

cyclic carbonate substituents, Silicon Chem, 3, 259-266 

(2007). 

B. M. McCollum, T. Abe, J.-C. Brodovitch, J. A. C. Cluburne, 

T. Iwamoto, M. Kira, P. W. Percival and R. West, 

Probing the reactivity of a stable silene using muonium, Angew. 

Che. Int. Ed, 50, 9772-9774 (2008). 

Z. Chen. L. Zhang, R. West and K. Amine, Gel electrolyte 

for lithium ion batteries, Elecrtochim. Acta, 53, 3262-3266 

(2008). 

I. S. Toulokhonova, V. I. Timokhin, D. N. Bunck, T. 

Mueller, I. Guzei and R. West, Silylene and germylene intermediates 

in the reactions of silole and germole dianions with 

N,N-di-tert-butylethylenediamine, Eur. J. Inorg. Chem, 

2344-2349 (2008). 

Lingzhi Zhang, Zhengcheng Zhang, Scott Harring, Megan 

Straughan, Rachel Butorac, Zonghai Chen, Leslie Lyons, 

Khalil Amine and Robert West, Highly conductive trimethyllov 

and Robert West, Intermolecular =C-H···:C hydrogen 

bond in a crystalline unsaturated Arduengo-type carbene, 

Mendeleev Commun, 18, 14-15 (2008). 

Robert West, Novel aromatic species containing group 14 

atoms, Pure Appl. Chem, 80, 563-569 (2008). 

Adam C. Tomasik, The synthesis, characterization and re- 

activity of N-heterocyclic silylenes and germylenes. (D) 

WHITLOCK, HOWARD W. JR. (b.1936) Emeritus 

Professor. B.S, 1957, University of Maryland; Ph.D, 

1961, University of Wisconsin—Madison. Organic 

Chemistry. Artificial intelligence applied to Organic 

chemistry. TEL: (608) 262-3180 FAX: (608) 265-4534 

Web: www.chem.wisc.edu 

Email: whitlock@chem.wisc.edu 


WOODS, R. CLAUDE, III (b.1940) Professor. B.S, 

1961, Georgia Inst. Technology; M.A, 1962, Harvard 

University; Ph.D, 1965, Harvard University. Materials 

Chemistry; Physical Chemistry. Microwave and laser 

infrared spectroscopy of molecular ions and other transient 

species in electric discharge plasmas; ab initio electronic 

structure calculations; radioastronomy and 

astrochemistry; plasma etching; plasma diagnostics. Terahertz 

Plasma Spectroscopy for Microfluidics. Design of 

Biomaterials the Direct Differentiation of Stem Cells. 

TEL: (608) 262-2892 FAX: (608) 262-0381 

Email: woods@chem.wisc.edu 


WRIGHT, JOHN C. (b.1943) Professor. B.S, 1965, 

Union College; Ph.D, 1970, Johns Hopkins University. 

Postdoctoral Student, 1970-1972, Purdue University. Analytical 

Chemistry; Physical Chemistry. Coherent two dimensional 

spectroscopy, nonlinear spectroscopy, photovoltaic 

materials, electron transfer, analytical chemistry, 

materials chemistry, hydrogen bonding interactions, protein 

spectroscopy. TEL: (608) 262-0351 FAX: (608) 

262-0453 

Web: www.chem.wisc.edu/people/profiles/Wright.php 

Email: wright@chem.wisc.edu 

Shan Ke, John C. Wright and Glen S. Kwon, Avidin-Biotin-PEG-CPA 

complexes as potential EPR-Directed therapeutic 

protein carriers: Preparation and characterization, Bioconjugate 

Chem, 18, 1644-1650 (2007). 

Shan Ke, John C. Wright and Glen S. Kwon, Intermolecular 

interaction of avidin and PEGylated biotin, Bioconjugate 

Chem, 18, 2109-2114 (2007). 

Mark A. Rickard, Andrei V. Pakoulev, Nathan A. Mathew, 

Kathryn M. Kornau and John C. Wright, Frequency and 

time-resolved coherence transfer spectroscopy, J. Phys. 

Chem. A, 111, 1163-1166 (2007). 

Andrei V. Pakoulev, Mark A. Rickard, Nathan A. Mathew, 

Kathryn M. Kornau and John C. Wright, Spectral quantum 

beating in mixed frequency/time-domain coherent multidimensional 

spectroscopy, J. Phys. Chem. A, 111, 6999-7005 

(2007). 

Andrei V. Pakoulev, Mark A. Rickard, Nathan A. Mathew, 

Kathryn M. Kornau and John C. Wright, Frequency-domain 

time-resolved four wave mixing spectroscopy of vibrational 

coherence transfer with single-color excitation, J. Phys. 

Chem. A, 112, 6320-6329 (2008). 

Mark A. Rickard, Fundamental studies of triply vibrationally 

enhanced four wave mixing spectroscopy. (D) 

YETHIRAJ, ARUN (b.1963) Professor. B.Tech, 

1985, Indian Institute of Technology; M.S, 1987, Louisi- 

ana State University; Ph.D, 1991, North Carolina State 

University. Postdoctoral Research Associate, 1991-1993, 

University of Illinois. Biophysics/Biophysical Chemistry; 

Theoretical Chemistry. Statistical mechanics of complex 

fluids; computer simulation; macromolecules; membrane 

biophysics; polyelectrolyte solutions; fluids in random 

media. TEL: (608) 262-0258 FAX: (608) 262-9918 

Web: www.chem.wisc.edu/~yethiraj 

Email: yethiraj@chem.wisc.edu 

Jaisree Moorthy, Richard Burgess, Arun Yethiraj and David 

Beebe, Microfluidic Based Platform for Characterization 

of Protein Interactions in Hydrogel Nanoenvironments, Anal. 


P. F. Barbara, W.-S. Chang, S. Link, G. D. Scholes and 

Arun Yethiraj, Structure and dynamics of conjugated polymers 

in liquid crystalline solvents, Annu. Rev. Phys. Chem, 

58, 565-584 (2007). 

fective simulation protocols for �- and �/�-mixed peptides. 

I. QM and QM/MM models, J. Chem. Theory Comput, 3, 

1538-1549 (2007). 

Xi Chen, Qiang Cui, Yuye Tang, Jejoong Yoo and Arun 

Yethiraj, Gating mechanisms of mechanosensitive channels 

of large conductance, I: a continuum mechanics-based hier- 

archical framework, Biophys. J, 95, 563-580 (2008). 


Chen, Gating mechanisms of mechanosensitive channels of 

large conductance, II: systematic study of conformational 

transitions, Biophys. J, 95, 581-596 (2008). 


Chen, Mechanosensitive channels: Insights from continuumbased 

simulations, Cell Biochemistry and Biophysics, 52, 1- 

18 (2008). 

Bong June Sung and Arun Yethiraj, The effect of matrix 

structure on the diffusion of fluids in porous media, J. Chem. 

Phys, 128, 054702/1-054702/8 (2008). 

Claire L. Pizzey, William C. Pomerantz, Bong-June Sung, 

Virany M. Yuwono, Samuel H. Gellman, Jeffery D. Hartgerink, 

Arun Yethiraj and Nicholas L. Abbott, Characterization 

of nanofibers formed by self-assembly of �-peptide oligomers 

using small angle x-ray scattering, J. Chem. Phys, 129, 

095103/1-095103/8 (2008). 

Venkat Padmanabhan, Sanat K. Kumar and Arun Yethiraj, 

Phase behavior of semiflexible polymer chains, J. Chem. 

Phys, 128, 124908/1-124908/4 (2008). 

Bong June Sung and Arun Yethiraj, Lateral Diffusion of 

Proteins in the Plasma Membrane: Spatial Tessellation and 

Percolation Theory, J. Phys. Chem. B, 112, 143-149 (2008). 

Jun Soo Kim and Arun Yethiraj, A Diffusive Anomaly of 

Water in Aqueous Sodium Chloride Solutions at Low Temperatures, 

J. Phys. Chem. B, 112, 1729-1735 (2008). 

Wei-Shun Chang, Stephan Link, Arun Yethiraj and Paul F. 

Barbara, Single Molecule Spectroscopy of Conjugated Polymer 

Chains in an Electric Field-Aligned Liquid Crystal, J. 

Phys. Chem. B, 112, 448-453 (2008). 

Xiao Zhu, Peter Koenig, Samuel H. Gellman, Arun Yethi- 

raj and Qiang Cui, Establishing Effective Simulation Proto- 

cols for �- and �/�-Peptides. II. Molecular Mechanical 

(MM) Model for a Cyclic �-Residue, J. Phys. Chem. B, 112, 

5439-5448 (2008). 

Jun Soo Kim and Arun Yethiraj, The effect of salt on the 

melting of ice: A molecular dynamics simulation study, Journal 

of Chemical Physics, 129, 124504 (2008). 

YOON, TEHSHIK PETER (b.1975) Assistant Professor. 

A.B, 1996, Harvard University; M.S, 1998, California 

Institute of Technology; Ph.D, 2002, California 

Institute of Technology. NIH Postdoctoral Fellow, 2002- 

2005, Harvard University. Organic Chemistry; Synthesis. 

Asymmetric catalysis, synthetic methods and organic 

synthesis, metal-catalyzed reactions, oxidative functionalization 

of hydrocarbons, chemistry of oxaziridines, 

aminohydroxylations, nitrone cycloadditions, visible 

light photocatalysis. TEL: (608) 262-2268 FAX: (608) 

265-4534 

Web: yoon.chem.wisc.edu 

Email: tyoon@chem.wisc.edu 

David J. Michaelis, Christopher J. Shaffer and Tehshik P. 

Yoon, Copper(II)-catalyzed aminohydroxylation of olefins, 

J. Am. Chem. Soc, 129, 1866 (2007). 

Michael A. Ischay, Mary E. Anzovino, Juana Du and 

Tehshik P. Yoon, Efficient visible light photocatalysis of 

[2+2] enone cycloadditions, J. Am. Chem. Soc, 130, 12886 

(2008). 

Katherine M. Partridge, Mary E. Anzovino and Tehshik P. 

Yoon, Cycloadditions of N-sulfonyl nitrones generated by 

lewis acid catalyzed rearrangement of oxaziridines, J. Am. 

Chem. Soc, 130, 2920-2921 (2008). 

David J. Michaelis, Michael A. Ischay and Tehshik P. 

Yoon, Activation of N-sulfonyl oxaziridines using copper(II) 

catalysts: Aminohydroxylations of styrenes and 1,3-dienes, J. 

Am. Chem. Soc, 130, 6610-6615 (2008). 

YU, HYUK (b.1933) Professor Emeritus. B.S, 1955, 

Seoul National University; M.S, 1958, University of 

Southern California; A.M, 1960, Princeton University; 

Ph.D, 1962, Princeton University. Research Associate, 

1962-1963, Dartmouth College. Physical Chemistry; 

Polymer Science. Physical chemistry of macromolecules 

in solution, interfacial phenomena of polymers on liquid 

and solid surfaces, dynamics of amphiphiles on monolayers 

and bilayers, and applications of polymers in in- 

formation technology. TEL: (608) 262-3082 FAX: (608) 

262-9918 

Web: www.chem.wisc.edu/users/yu 

Email: hyukyu@mhtc.net 

yu@chem.wisc.edu 

silyl oligo(ethylene oxide) electrolytes for energy storage ap- Arun Yethiraj and James C. Weisshaar, Why are lipid rafts Alan R. Esker, Chanjoong Kim and Hyuk Yu, Polymer 

plications, J. Mater. Chem, 18, 3713-3717 (2008). not observed in vivo?, Biophys. J, 93, 3113-3119 (2007). monolayer dynamics, Adv. Polym. Sci, 209, 59-110 (2007). 

Z. Chen, H. Wang, D. Vissers, L. Zhang, R. West, L. Bong June Sung and Arun Yethiraj, Permeation of a hard Chanjoong Kim, Alan R. Esker and Hyuk Yu, Two dimen- 

Lyons and K. Amine, Kinetic investigation of the solvation sphere fluid into a quenched matrix, J. Chem. Phys, 126, sional viscoelastic behavior of poly(1-alkylene-co-maleic 

of lithium salts in siloxanes, J. Phys. Chem. C, 112, 2210 034704/1-034704/5 (2007). acid) at the air/water interface, PMSE Prepr, 97, 959 (2007). 

(2008). Rakwoo Chang and Arun Yethiraj, Structure and dynamics Chanjoong Kim, Marc C. Gurau, Paul S. Cremer and Hyuk 

Robert West, Muon spin resonance: A new spectroscopy of short chain molecules in disordered porous materials: A Yu, Chain Conformation of Poly(dimethyl siloxane) at the


Air/Water Interface by Sum Frequency Generation, Langmuir, 

24, 10155-10160 (2008). 

YU, LIAN —See Medicinal and/or Pharmaceutical 



ZANNI, MARTIN T. (b.1972) Associate Professor. 

B.A, 1994, University of Rochester; B.S, 1994, University 

of Rochester; Ph.D, 1999, University of California— 

Berkeley. NIH postdoctoral fellow, 2000-2002, University 

of Pennsylvania. Biophysics/Biophysical Chemistry; 

Physical Chemistry. Developing two-dimensional infrared 

spectroscopy and applying it to examine the vibrational 

couplings and dynamics of biomolecular systems. 

TEL: (608) 262-4783 FAX: (608) 262-9918 

Web: www.chem.wisc.edu/people 

Email: zanni@chem.wisc.edu 

Feng Ding and Martin T. Zanni, Heterodyned 3D IR spectroscopy, 

Chem. Phys, 341, 95-105 (2007). 

David B. Strasfeld, Sang-Hee Shim and Martin T. Zanni, 

Controlling Vibrational Excitation with Shaped Mid-IR 

Pulses, Phys. Rev. Lett, 99, 038102/1-038102/4 (2007). 

Sang-Hee Shim, David B. Strasfeld, Yun L. Ling and Martin 

T. Zanni, Automated 2D IR spectroscopy using a mid-IR 

pulse shaper and application of this technology to the human 

islet amyloid polypeptide, Proc. Natl. Acad. Sci. U. S. A, 104, 

14197-14202 (2007). 

David B. Strasfeld, Sang-Hee Shim and Martin T. Zanni, 

Acousto-optic shaping of femtosecond pulses directly in the 

mid-IR, Springer Ser. Chem. Phys, 88, 151-153 (2007). 

Feng Ding, Eric C. Fulmer, Prabuddha Mukherjee and 

Martin T. Zanni, Femtosecond 3D IR spectroscopy, Springer 

Ser. Chem. Phys, 88, 404-406 (2007). 

David B. Strasfeld, Yun L. Ling, Sang-Hee Shim and Martin 

T. Zanni, Tracking Fiber Formation in Human Islet Amyloid 

Polypeptide with Automated 2D-IR Spectroscopy, J. 

Am. Chem. Soc, 130, 6698-6699 (2008). 

Amber T. Krummel and Martin T. Zanni, Evidence for 

Coupling between Nitrile Groups Using DNA Templates: A 

Promising New Method for Monitoring Structures with Infrared 

Spectroscopy, J. Phys. Chem. B, 112, 1336-1338 

(2008). 

ZIMMERMAN, HOWARD E. (b.1926) Professor 

(Arthur C. Cope and Hilldale Professor of Chemistry). 

B.S, 1950, Yale University; Ph.D, 1953, Yale University. 

National Research Council Postdoctoral Fellowship, 

1953-1954, Harvard University. Organic Chemistry; 

Photochemistry. Synthesis of unusual org. molecules/ 

study of unusual unstable species/unusual organic reaction 

mechanisms/intramolecular proton transfer/exploratory 

and mechanistic org. photochem/ theoretical org. 

chem. /experimental and theoretical solid state 

photochemistry/ triplet vinylcyclopropene rearrangements/heterocyclic 

photochem in contrast/conical control 

of reactions/allenic enolate geometry /zwitterion intervention/ 

quantitative cavity control of solid-state 

photochemistry. TEL: (608) 262-1502 FAX: (608) 262- 

0381 

Web: www.chem.wisc.edu/~zimmerman 

Email: Zimmerman@chem.wisc.edu 

Howard E. Zimmerman and Vijay Suryanarayan, Organic 

photochemical rearrangements of triplets and zwitterions; 

mechanistic and exploratory organic photochemistry, Eur. J. 

Org. Chem, 4091-4102 (2007). 

Howard E. Zimmerman and Oleg D. Mitkin, The aza-type- 

B photochemical rearrangement: The role of a second carbonyl 

in heterocyclic photochemistry. Mechanistic and exploratory 

organic photochemistry, J. Org. Chem, 72, 6091- 

6096 (2007). 

Howard E. Zimmerman, Triplet photochemistry of vinyl 

cyclopropenes; mechanistic and exploratory organic 

photochemistry, J Org. Chem, 73, 1247-1251 (2008).

UNIVERSITY OF WISCONSIN-MADISON

You also want an ePaper? Increase the reach of your titles

Delete template?

Save as template?